Literature DB >> 23795089

Dimethyl 2-(4-methyl-benzyl-idene)malonate.

Assem Barakat1, Abdullah Mohammed Al-Majid, Yahia Nasser Mabkhot, M Iqbal Choudhary, Sammer Yousuf.   

Abstract

In the mol-ecule of the title compound, C13H14O4, the benzene ring forms dihedral angles of 18.60 (7) and 81.36 (8)° with the two arms of the malonate moiety. The crystal structure features C-H⋯O inter-actions, which form chains running parallel to the b axis.

Entities:  

Year:  2013        PMID: 23795089      PMCID: PMC3685070          DOI: 10.1107/S1600536813012464

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity and synthesis of alkyl­idene and aryl­idene malonates, see: Liu et al. (2012 ▶); Heydri & Tahamipour (2011 ▶); Xu & Wang (2011 ▶); Li et al. (2010 ▶, 2011 ▶); Gallier et al. (2009 ▶); Besavaiah et al. (2004 ▶). For the structures of related compounds, see: Rappoport & Gazit (1986 ▶)

Experimental

Crystal data

C13H14O4 M = 234.24 Monoclinic, a = 14.0516 (6) Å b = 7.7446 (3) Å c = 12.5113 (5) Å β = 113.727 (1)° V = 1246.44 (9) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 273 K 0.55 × 0.36 × 0.16 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.951, T max = 0.985 7125 measured reflections 2316 independent reflections 1850 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.136 S = 1.08 2316 reflections 154 parameters H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995 ▶) and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813012464/rz5063sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813012464/rz5063Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813012464/rz5063Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H14O4F(000) = 496
Mr = 234.24Dx = 1.248 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2372 reflections
a = 14.0516 (6) Åθ = 3.1–26.3°
b = 7.7446 (3) ŵ = 0.09 mm1
c = 12.5113 (5) ÅT = 273 K
β = 113.727 (1)°Block, colourless
V = 1246.44 (9) Å30.55 × 0.36 × 0.16 mm
Z = 4
Bruker SMART APEX CCD area-detector diffractometer2316 independent reflections
Radiation source: fine-focus sealed tube1850 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.021
ω scanθmax = 25.5°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −17→11
Tmin = 0.951, Tmax = 0.985k = −9→9
7125 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.136H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0674P)2 + 0.2125P] where P = (Fo2 + 2Fc2)/3
2316 reflections(Δ/σ)max < 0.001
154 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.15387 (12)−0.05063 (19)0.26275 (14)0.0835 (5)
O20.03912 (10)0.15029 (16)0.16332 (11)0.0631 (4)
O30.10137 (11)0.30017 (18)−0.02578 (11)0.0775 (5)
O40.19102 (10)0.45753 (15)0.13086 (11)0.0621 (4)
C10.36456 (14)0.2423 (2)0.04658 (15)0.0594 (5)
H1A0.29960.28970.00270.071*
C20.44558 (15)0.2730 (2)0.01473 (16)0.0635 (5)
H2A0.43400.3405−0.05080.076*
C30.54418 (14)0.2067 (2)0.07690 (16)0.0589 (5)
C40.55784 (15)0.1057 (3)0.17338 (17)0.0649 (5)
H4A0.62300.05920.21720.078*
C50.47681 (15)0.0728 (2)0.20574 (16)0.0607 (5)
H5A0.48830.00340.27040.073*
C60.37811 (13)0.1409 (2)0.14407 (14)0.0521 (4)
C70.29555 (14)0.0931 (2)0.18075 (14)0.0540 (4)
H7A0.31160.00010.23210.065*
C80.20104 (13)0.1592 (2)0.15361 (14)0.0517 (4)
C90.13063 (14)0.0737 (2)0.20022 (15)0.0555 (4)
C10−0.03757 (16)0.0739 (3)0.19883 (19)0.0683 (5)
H10A−0.10050.14050.16770.103*
H10B−0.01140.07260.28250.103*
H10C−0.0517−0.04220.16980.103*
C110.15819 (13)0.3100 (2)0.07484 (14)0.0512 (4)
C120.15580 (17)0.6132 (2)0.0614 (2)0.0775 (6)
H12A0.18390.71250.10980.116*
H12B0.08130.61810.02950.116*
H12C0.17900.6120−0.00110.116*
C130.63181 (16)0.2386 (3)0.03988 (19)0.0766 (6)
H13A0.60810.3113−0.02800.115*
H13B0.65540.13050.02190.115*
H13C0.68800.29430.10210.115*
U11U22U33U12U13U23
O10.0768 (10)0.0778 (10)0.1055 (11)0.0191 (8)0.0467 (8)0.0389 (8)
O20.0565 (8)0.0567 (7)0.0771 (8)0.0059 (6)0.0280 (6)0.0078 (6)
O30.0810 (10)0.0704 (9)0.0579 (8)0.0043 (7)0.0039 (7)0.0042 (6)
O40.0622 (8)0.0465 (7)0.0703 (8)0.0023 (6)0.0191 (6)0.0000 (5)
C10.0510 (10)0.0607 (11)0.0617 (10)0.0083 (8)0.0176 (8)0.0066 (8)
C20.0654 (12)0.0638 (12)0.0616 (10)0.0018 (9)0.0260 (9)0.0032 (9)
C30.0556 (10)0.0563 (10)0.0629 (10)−0.0051 (8)0.0218 (8)−0.0171 (8)
C40.0476 (10)0.0688 (12)0.0669 (11)0.0076 (9)0.0111 (8)−0.0072 (9)
C50.0561 (11)0.0598 (11)0.0582 (10)0.0083 (9)0.0148 (8)0.0043 (8)
C60.0517 (10)0.0460 (9)0.0531 (9)0.0034 (7)0.0154 (7)−0.0030 (7)
C70.0561 (11)0.0482 (9)0.0529 (9)0.0039 (8)0.0169 (8)0.0051 (7)
C80.0525 (10)0.0454 (9)0.0524 (9)0.0017 (7)0.0161 (7)−0.0002 (7)
C90.0584 (11)0.0488 (10)0.0579 (10)0.0051 (8)0.0220 (8)0.0023 (8)
C100.0605 (11)0.0678 (12)0.0826 (13)−0.0028 (10)0.0349 (10)−0.0023 (10)
C110.0438 (9)0.0518 (10)0.0551 (9)0.0020 (7)0.0170 (7)0.0010 (7)
C120.0783 (14)0.0483 (11)0.1068 (16)0.0099 (10)0.0383 (13)0.0147 (10)
C130.0645 (12)0.0831 (14)0.0874 (14)−0.0078 (11)0.0359 (11)−0.0216 (11)
O1—C91.200 (2)C5—H5A0.9300
O2—C91.319 (2)C6—C71.457 (2)
O2—C101.447 (2)C7—C81.334 (2)
O3—C111.1913 (19)C7—H7A0.9300
O4—C111.3226 (19)C8—C111.490 (2)
O4—C121.452 (2)C8—C91.491 (2)
C1—C21.370 (3)C10—H10A0.9600
C1—C61.398 (2)C10—H10B0.9600
C1—H1A0.9300C10—H10C0.9600
C2—C31.386 (3)C12—H12A0.9600
C2—H2A0.9300C12—H12B0.9600
C3—C41.385 (3)C12—H12C0.9600
C3—C131.500 (3)C13—H13A0.9600
C4—C51.377 (3)C13—H13B0.9600
C4—H4A0.9300C13—H13C0.9600
C5—C61.391 (2)
C9—O2—C10116.73 (15)C11—C8—C9116.87 (15)
C11—O4—C12115.97 (14)O1—C9—O2124.07 (17)
C2—C1—C6120.92 (16)O1—C9—C8124.21 (16)
C2—C1—H1A119.5O2—C9—C8111.71 (15)
C6—C1—H1A119.5O2—C10—H10A109.5
C1—C2—C3122.19 (18)O2—C10—H10B109.5
C1—C2—H2A118.9H10A—C10—H10B109.5
C3—C2—H2A118.9O2—C10—H10C109.5
C4—C3—C2117.06 (18)H10A—C10—H10C109.5
C4—C3—C13121.26 (18)H10B—C10—H10C109.5
C2—C3—C13121.67 (18)O3—C11—O4123.90 (16)
C5—C4—C3121.31 (17)O3—C11—C8124.73 (16)
C5—C4—H4A119.3O4—C11—C8111.37 (14)
C3—C4—H4A119.3O4—C12—H12A109.5
C4—C5—C6121.63 (18)O4—C12—H12B109.5
C4—C5—H5A119.2H12A—C12—H12B109.5
C6—C5—H5A119.2O4—C12—H12C109.5
C5—C6—C1116.89 (17)H12A—C12—H12C109.5
C5—C6—C7118.11 (16)H12B—C12—H12C109.5
C1—C6—C7124.87 (15)C3—C13—H13A109.5
C8—C7—C6131.27 (16)C3—C13—H13B109.5
C8—C7—H7A114.4H13A—C13—H13B109.5
C6—C7—H7A114.4C3—C13—H13C109.5
C7—C8—C11124.44 (16)H13A—C13—H13C109.5
C7—C8—C9118.63 (15)H13B—C13—H13C109.5
C6—C1—C2—C3−0.3 (3)C6—C7—C8—C9176.17 (16)
C1—C2—C3—C40.5 (3)C10—O2—C9—O1−2.0 (3)
C1—C2—C3—C13178.91 (17)C10—O2—C9—C8177.38 (14)
C2—C3—C4—C50.1 (3)C7—C8—C9—O11.2 (3)
C13—C3—C4—C5−178.38 (17)C11—C8—C9—O1178.61 (17)
C3—C4—C5—C6−0.8 (3)C7—C8—C9—O2−178.12 (15)
C4—C5—C6—C10.9 (3)C11—C8—C9—O2−0.7 (2)
C4—C5—C6—C7177.10 (16)C12—O4—C11—O3−1.6 (3)
C2—C1—C6—C5−0.4 (3)C12—O4—C11—C8178.58 (14)
C2—C1—C6—C7−176.28 (17)C7—C8—C11—O398.3 (2)
C5—C6—C7—C8166.38 (18)C9—C8—C11—O3−78.9 (2)
C1—C6—C7—C8−17.8 (3)C7—C8—C11—O4−81.9 (2)
C6—C7—C8—C11−1.0 (3)C9—C8—C11—O4100.88 (17)
D—H···AD—HH···AD···AD—H···A
C13—H13C···O1i0.962.493.442 (3)170
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C13—H13C⋯O1i 0.962.493.442 (3)170

Symmetry code: (i) .

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