Literature DB >> 23795074

8,11,24-Trioxa-21-thia-19-aza-penta-cyclo-[16.6.0.0(2,7).0(12,17).0(19,23)]tetra-cosa-2(7),3,5,12,14,16-hexa-ene.

Seenivasan Karthiga Devi1, Thothadri Srinivasan, Santhanagopalan Purushothaman, Raghavachary Raghunathan, Devadasan Velmurugan.   

Abstract

In the title compound, C19H19NO3S, the thia-zole and oxazolidine rings each adopt an envelope conformation, with the S and O atoms as the respective flap atoms. The thia-zole and oxazolidine rings (all atoms) make a dihedral angle of 66.39 (11)° while the phenyl rings subtend a dihedral angle of 22.71 (10)°.

Entities:  

Year:  2013        PMID: 23795074      PMCID: PMC3685055          DOI: 10.1107/S1600536813012798

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of thia­zole derivatives, see: Guo et al. (2006 ▶); Karegoudar et al. (2008 ▶); Reddy et al. (1999 ▶).

Experimental

Crystal data

C19H19NO3S M = 341.42 Monoclinic, a = 10.725 (5) Å b = 10.405 (5) Å c = 14.930 (5) Å β = 100.262 (5)° V = 1639.4 (12) Å3 Z = 4 Mo Kα radiation μ = 0.22 mm−1 T = 293 K 0.30 × 0.25 × 0.20 mm

Data collection

Bruker SMART APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.938, T max = 0.958 15331 measured reflections 4067 independent reflections 2586 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.149 S = 1.03 4067 reflections 217 parameters H-atom parameters constrained Δρmax = 0.64 e Å−3 Δρmin = −0.34 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813012798/bt6902sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813012798/bt6902Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813012798/bt6902Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H19NO3SF(000) = 720
Mr = 341.42Dx = 1.383 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4067 reflections
a = 10.725 (5) Åθ = 1.9–28.4°
b = 10.405 (5) ŵ = 0.22 mm1
c = 14.930 (5) ÅT = 293 K
β = 100.262 (5)°Block, colourless
V = 1639.4 (12) Å30.30 × 0.25 × 0.20 mm
Z = 4
Bruker SMART APEXII area-detector diffractometer4067 independent reflections
Radiation source: fine-focus sealed tube2586 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.030
ω and φ scansθmax = 28.4°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −14→14
Tmin = 0.938, Tmax = 0.958k = −13→13
15331 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.149H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0712P)2 + 0.3653P] where P = (Fo2 + 2Fc2)/3
4067 reflections(Δ/σ)max < 0.001
217 parametersΔρmax = 0.64 e Å3
0 restraintsΔρmin = −0.34 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.67608 (18)0.00360 (19)0.35262 (13)0.0435 (4)
C20.5857 (2)0.0394 (2)0.40363 (16)0.0580 (6)
H20.5126−0.00950.40130.070*
C30.6040 (3)0.1464 (3)0.45719 (16)0.0685 (7)
H30.54370.16920.49200.082*
C40.7105 (3)0.2208 (2)0.46029 (16)0.0661 (7)
H40.72210.29430.49630.079*
C50.8005 (2)0.1848 (2)0.40896 (14)0.0556 (5)
H50.87250.23520.41090.067*
C60.78602 (17)0.07568 (18)0.35488 (12)0.0417 (4)
C70.88455 (17)0.03869 (17)0.29832 (12)0.0386 (4)
H70.8874−0.05510.29330.046*
C80.85966 (16)0.09868 (18)0.20073 (12)0.0404 (4)
H80.80240.17230.19920.048*
C90.80786 (17)0.00603 (18)0.12575 (12)0.0401 (4)
C100.8866 (2)−0.0566 (2)0.07553 (13)0.0487 (5)
H100.9731−0.03920.08720.058*
C110.8391 (2)−0.1444 (2)0.00832 (14)0.0587 (6)
H110.8933−0.1864−0.02430.070*
C120.7101 (2)−0.1691 (2)−0.00986 (14)0.0582 (6)
H120.6774−0.2282−0.05470.070*
C130.6300 (2)−0.1062 (2)0.03824 (14)0.0517 (5)
H130.5434−0.12240.02550.062*
C140.67837 (17)−0.01947 (18)0.10528 (12)0.0404 (4)
C150.50032 (19)−0.0129 (2)0.18360 (16)0.0538 (5)
H15A0.4389−0.04040.13140.065*
H15B0.45840.04680.21840.065*
C160.54456 (18)−0.1283 (2)0.24204 (15)0.0535 (5)
H16A0.4819−0.14880.27930.064*
H16B0.5516−0.20150.20310.064*
C171.05652 (19)0.1675 (2)0.27269 (14)0.0507 (5)
H171.04900.25830.28850.061*
C181.1925 (2)0.1351 (3)0.27092 (18)0.0690 (7)
H18A1.24860.18200.31780.083*
H18B1.21400.15600.21220.083*
C191.1041 (2)−0.0106 (2)0.37495 (17)0.0653 (6)
H19A1.0625−0.09030.38610.078*
H19B1.15400.01860.43200.078*
N11.01005 (14)0.08607 (16)0.33910 (11)0.0472 (4)
O10.66449 (12)−0.10640 (12)0.29984 (9)0.0473 (3)
O20.60208 (12)0.05173 (13)0.15245 (9)0.0488 (4)
O30.98101 (12)0.14160 (14)0.18684 (9)0.0507 (4)
S11.20505 (6)−0.03571 (7)0.29167 (6)0.0782 (3)
U11U22U33U12U13U23
C10.0465 (10)0.0417 (10)0.0441 (10)0.0101 (8)0.0126 (8)0.0106 (8)
C20.0566 (13)0.0594 (14)0.0645 (13)0.0105 (10)0.0288 (11)0.0127 (11)
C30.0815 (18)0.0714 (16)0.0609 (14)0.0299 (14)0.0351 (13)0.0091 (12)
C40.0878 (18)0.0574 (14)0.0537 (12)0.0204 (13)0.0147 (12)−0.0083 (11)
C50.0636 (13)0.0524 (13)0.0502 (11)0.0061 (10)0.0086 (10)−0.0087 (10)
C60.0450 (10)0.0420 (10)0.0374 (9)0.0067 (8)0.0053 (8)0.0034 (8)
C70.0368 (9)0.0384 (10)0.0402 (9)0.0004 (7)0.0064 (7)−0.0012 (8)
C80.0376 (9)0.0396 (10)0.0436 (9)−0.0009 (7)0.0061 (7)0.0032 (8)
C90.0437 (10)0.0402 (10)0.0353 (8)0.0010 (8)0.0045 (8)0.0072 (8)
C100.0463 (11)0.0575 (13)0.0429 (10)0.0006 (9)0.0090 (8)0.0003 (9)
C110.0670 (14)0.0629 (14)0.0479 (11)0.0057 (11)0.0153 (10)−0.0063 (10)
C120.0724 (15)0.0548 (13)0.0444 (11)−0.0044 (11)0.0025 (10)−0.0077 (10)
C130.0488 (11)0.0515 (12)0.0514 (11)−0.0051 (9)−0.0007 (9)0.0001 (10)
C140.0410 (10)0.0410 (10)0.0379 (9)0.0019 (8)0.0036 (8)0.0063 (8)
C150.0374 (10)0.0616 (13)0.0622 (12)0.0019 (9)0.0083 (9)0.0054 (11)
C160.0416 (11)0.0523 (13)0.0676 (13)−0.0057 (9)0.0127 (10)0.0010 (10)
C170.0539 (12)0.0419 (11)0.0545 (11)−0.0115 (9)0.0044 (9)−0.0019 (9)
C180.0471 (12)0.0852 (18)0.0733 (15)−0.0232 (12)0.0072 (11)0.0086 (14)
C190.0432 (11)0.0781 (16)0.0700 (14)0.0011 (11)−0.0025 (10)0.0228 (13)
N10.0386 (8)0.0540 (10)0.0465 (9)−0.0036 (7)0.0012 (7)−0.0003 (8)
O10.0407 (7)0.0416 (8)0.0598 (8)0.0031 (6)0.0095 (6)0.0025 (6)
O20.0420 (7)0.0461 (8)0.0591 (8)0.0028 (6)0.0114 (6)0.0029 (6)
O30.0468 (8)0.0582 (9)0.0470 (7)−0.0132 (6)0.0076 (6)0.0059 (7)
S10.0494 (4)0.0816 (5)0.1040 (6)0.0119 (3)0.0148 (3)−0.0004 (4)
C1—O11.383 (2)C12—C131.378 (3)
C1—C21.386 (3)C12—H120.9300
C1—C61.393 (3)C13—C141.379 (3)
C2—C31.364 (3)C13—H130.9300
C2—H20.9300C14—O21.386 (2)
C3—C41.374 (4)C15—O21.428 (2)
C3—H30.9300C15—C161.510 (3)
C4—C51.386 (3)C15—H15A0.9700
C4—H40.9300C15—H15B0.9700
C5—C61.386 (3)C16—O11.434 (2)
C5—H50.9300C16—H16A0.9700
C6—C71.515 (3)C16—H16B0.9700
C7—N11.461 (2)C17—O31.415 (2)
C7—C81.564 (2)C17—N11.458 (3)
C7—H70.9800C17—C181.501 (3)
C8—O31.426 (2)C17—H170.9800
C8—C91.506 (3)C18—S11.805 (3)
C8—H80.9800C18—H18A0.9700
C9—C101.388 (3)C18—H18B0.9700
C9—C141.393 (3)C19—N11.457 (3)
C10—C111.386 (3)C19—S11.808 (3)
C10—H100.9300C19—H19A0.9700
C11—C121.386 (3)C19—H19B0.9700
C11—H110.9300
O1—C1—C2122.33 (19)C12—C13—H13120.0
O1—C1—C6116.70 (16)C14—C13—H13120.0
C2—C1—C6120.9 (2)C13—C14—O2122.64 (17)
C3—C2—C1120.0 (2)C13—C14—C9121.01 (18)
C3—C2—H2120.0O2—C14—C9116.27 (16)
C1—C2—H2120.0O2—C15—C16112.49 (16)
C2—C3—C4120.8 (2)O2—C15—H15A109.1
C2—C3—H3119.6C16—C15—H15A109.1
C4—C3—H3119.6O2—C15—H15B109.1
C3—C4—C5119.0 (2)C16—C15—H15B109.1
C3—C4—H4120.5H15A—C15—H15B107.8
C5—C4—H4120.5O1—C16—C15112.16 (16)
C4—C5—C6121.8 (2)O1—C16—H16A109.2
C4—C5—H5119.1C15—C16—H16A109.2
C6—C5—H5119.1O1—C16—H16B109.2
C5—C6—C1117.49 (18)C15—C16—H16B109.2
C5—C6—C7121.07 (18)H16A—C16—H16B107.9
C1—C6—C7121.41 (17)O3—C17—N1107.18 (15)
N1—C7—C6111.36 (15)O3—C17—C18110.00 (18)
N1—C7—C8104.20 (14)N1—C17—C18109.38 (18)
C6—C7—C8113.43 (14)O3—C17—H17110.1
N1—C7—H7109.2N1—C17—H17110.1
C6—C7—H7109.2C18—C17—H17110.1
C8—C7—H7109.2C17—C18—S1105.17 (14)
O3—C8—C9108.52 (14)C17—C18—H18A110.7
O3—C8—C7104.59 (14)S1—C18—H18A110.7
C9—C8—C7114.59 (15)C17—C18—H18B110.7
O3—C8—H8109.7S1—C18—H18B110.7
C9—C8—H8109.7H18A—C18—H18B108.8
C7—C8—H8109.7N1—C19—S1107.90 (15)
C10—C9—C14118.11 (18)N1—C19—H19A110.1
C10—C9—C8121.49 (17)S1—C19—H19A110.1
C14—C9—C8120.40 (16)N1—C19—H19B110.1
C11—C10—C9121.33 (19)S1—C19—H19B110.1
C11—C10—H10119.3H19A—C19—H19B108.4
C9—C10—H10119.3C17—N1—C19110.68 (17)
C12—C11—C10119.3 (2)C17—N1—C7108.30 (15)
C12—C11—H11120.3C19—N1—C7116.49 (17)
C10—C11—H11120.3C1—O1—C16117.03 (14)
C13—C12—C11120.2 (2)C14—O2—C15117.95 (16)
C13—C12—H12119.9C17—O3—C8108.54 (14)
C11—C12—H12119.9C18—S1—C1986.56 (12)
C12—C13—C14120.0 (2)
O1—C1—C2—C3177.59 (19)C10—C9—C14—C131.2 (3)
C6—C1—C2—C3−0.2 (3)C8—C9—C14—C13−178.50 (17)
C1—C2—C3—C41.0 (3)C10—C9—C14—O2−175.54 (16)
C2—C3—C4—C5−0.8 (4)C8—C9—C14—O24.7 (2)
C3—C4—C5—C6−0.2 (3)O2—C15—C16—O137.5 (3)
C4—C5—C6—C11.0 (3)O3—C17—C18—S1−83.13 (18)
C4—C5—C6—C7179.23 (18)N1—C17—C18—S134.3 (2)
O1—C1—C6—C5−178.67 (16)O3—C17—N1—C19112.63 (19)
C2—C1—C6—C5−0.8 (3)C18—C17—N1—C19−6.6 (2)
O1—C1—C6—C73.1 (2)O3—C17—N1—C7−16.2 (2)
C2—C1—C6—C7−179.04 (17)C18—C17—N1—C7−135.44 (18)
C5—C6—C7—N127.6 (2)S1—C19—N1—C17−24.3 (2)
C1—C6—C7—N1−154.15 (16)S1—C19—N1—C7100.01 (18)
C5—C6—C7—C8−89.5 (2)C6—C7—N1—C17−122.40 (17)
C1—C6—C7—C888.7 (2)C8—C7—N1—C170.25 (19)
N1—C7—C8—O315.47 (18)C6—C7—N1—C19112.12 (19)
C6—C7—C8—O3136.75 (16)C8—C7—N1—C19−125.24 (18)
N1—C7—C8—C9134.16 (16)C2—C1—O1—C1647.3 (2)
C6—C7—C8—C9−104.56 (18)C6—C1—O1—C16−134.80 (18)
O3—C8—C9—C1020.6 (2)C15—C16—O1—C151.5 (2)
C7—C8—C9—C10−95.9 (2)C13—C14—O2—C1544.0 (2)
O3—C8—C9—C14−159.70 (16)C9—C14—O2—C15−139.28 (17)
C7—C8—C9—C1483.8 (2)C16—C15—O2—C1455.3 (2)
C14—C9—C10—C11−1.5 (3)N1—C17—O3—C827.1 (2)
C8—C9—C10—C11178.18 (18)C18—C17—O3—C8145.91 (17)
C9—C10—C11—C120.8 (3)C9—C8—O3—C17−148.93 (15)
C10—C11—C12—C130.3 (3)C7—C8—O3—C17−26.20 (19)
C11—C12—C13—C14−0.6 (3)C17—C18—S1—C19−40.58 (17)
C12—C13—C14—O2176.39 (17)N1—C19—S1—C1837.84 (17)
C12—C13—C14—C9−0.2 (3)
D—H···AD—HH···AD···AD—H···A
C5—H5···N10.932.512.834 (3)101
C7—H7···O10.982.472.805 (3)100
C10—H10···O30.932.392.728 (3)101
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis of some novel 2,4-disubstituted thiazoles as possible antimicrobial agents.

Authors:  Prakash Karegoudar; Mari Sithambaram Karthikeyan; Dasappa Jagadeesh Prasad; Manjathuru Mahalinga; Bantwal Shivarama Holla; Nalilu Sucheta Kumari
Journal:  Eur J Med Chem       Date:  2007-04-03       Impact factor: 6.514

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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