Literature DB >> 23795070

5-Cyclo-hexyl-3-(2-fluoro-phenyl-sulfin-yl)-2-methyl-1-benzo-furan.

Hong Dae Choi1, Pil Ja Seo, Uk Lee.   

Abstract

In the title compound, C21H21FO2S, the cyclo-hexyl ring adopts a chair conformation. The 2-fluoro-phenyl ring makes a dihedral angle of 88.47 (4)° with the mean plane [r.m.s. deviation = 0.013 (1) Å] of the benzo-furan fragment. In the crystal, mol-ecules are linked by weak C-H⋯O and C-H⋯π inter-actions, forming chains propagating along [100]. The crystal structure also exhibits slipped π-π inter-actions between the furan rings of neighboring mol-ecules [centroid-to-centroid distance = 3.397 (2) Å, inter-planar distance = 3.346 (2) Å and slippage = 0.586 (2) Å].

Entities:  

Year:  2013        PMID: 23795070      PMCID: PMC3685051          DOI: 10.1107/S1600536813011902

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information and the crystal structures of related compounds, see: Choi et al. (2011 ▶, 2012 ▶).

Experimental

Crystal data

C21H21FO2S M = 356.44 Triclinic, a = 9.0667 (2) Å b = 10.3647 (2) Å c = 10.6838 (2) Å α = 105.395 (1)° β = 93.418 (1)° γ = 110.839 (1)° V = 891.33 (3) Å3 Z = 2 Mo Kα radiation μ = 0.20 mm−1 T = 173 K 0.30 × 0.22 × 0.21 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.681, T max = 0.746 16785 measured reflections 4455 independent reflections 3495 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.116 S = 1.04 4455 reflections 227 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813011902/zl2547sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813011902/zl2547Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813011902/zl2547Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H21FO2SZ = 2
Mr = 356.44F(000) = 376
Triclinic, P1Dx = 1.328 Mg m3
Hall symbol: -P 1Melting point = 424–425 K
a = 9.0667 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.3647 (2) ÅCell parameters from 5827 reflections
c = 10.6838 (2) Åθ = 2.5–28.3°
α = 105.395 (1)°µ = 0.20 mm1
β = 93.418 (1)°T = 173 K
γ = 110.839 (1)°Block, colourless
V = 891.33 (3) Å30.30 × 0.22 × 0.21 mm
Bruker SMART APEXII CCD diffractometer4455 independent reflections
Radiation source: rotating anode3495 reflections with I > 2σ(I)
Graphite multilayer monochromatorRint = 0.031
Detector resolution: 10.0 pixels mm-1θmax = 28.4°, θmin = 2.0°
φ and ω scansh = −12→12
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −13→13
Tmin = 0.681, Tmax = 0.746l = −14→14
16785 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: difference Fourier map
wR(F2) = 0.116H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0549P)2 + 0.2597P] where P = (Fo2 + 2Fc2)/3
4455 reflections(Δ/σ)max = 0.001
227 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.76058 (5)1.09181 (4)0.70859 (4)0.03217 (12)
O11.03485 (12)0.87847 (12)0.60101 (10)0.0301 (2)
O20.67934 (15)1.12362 (13)0.60291 (12)0.0422 (3)
F10.79828 (12)0.97950 (14)0.92911 (10)0.0507 (3)
C10.84436 (18)0.96774 (16)0.63603 (14)0.0264 (3)
C20.77490 (17)0.83447 (15)0.52735 (14)0.0251 (3)
C30.62620 (18)0.75355 (16)0.44660 (15)0.0278 (3)
H30.54060.78600.45600.033*
C40.60561 (19)0.62411 (16)0.35184 (16)0.0306 (3)
C50.7353 (2)0.58063 (18)0.33814 (17)0.0364 (4)
H50.71980.49250.27260.044*
C60.8845 (2)0.66036 (18)0.41581 (17)0.0351 (4)
H60.97170.63040.40450.042*
C70.89918 (18)0.78535 (16)0.51019 (15)0.0273 (3)
C80.99753 (18)0.98799 (16)0.67553 (15)0.0282 (3)
C90.4458 (2)0.52941 (17)0.26325 (17)0.0362 (4)
H90.45100.43340.21930.043*
C100.4120 (2)0.5904 (2)0.15474 (17)0.0394 (4)
H10A0.40590.68580.19490.047*
H10B0.50120.60550.10390.047*
C110.2557 (2)0.4885 (2)0.06208 (19)0.0517 (5)
H11A0.23430.5336−0.00410.062*
H11B0.26620.39700.01470.062*
C120.1165 (2)0.4548 (2)0.1352 (2)0.0489 (5)
H12A0.09590.54390.17170.059*
H12B0.01940.38160.07300.059*
C130.1483 (2)0.3982 (2)0.2457 (2)0.0567 (6)
H13A0.15320.30190.20830.068*
H13B0.05900.38600.29630.068*
C140.3054 (2)0.5009 (2)0.3382 (2)0.0516 (5)
H14A0.29640.59400.38290.062*
H14B0.32540.45800.40670.062*
C151.1253 (2)1.09951 (19)0.78339 (17)0.0372 (4)
H15A1.09491.18210.81900.056*
H15B1.22561.13230.74930.056*
H15C1.14011.05810.85330.056*
C160.60472 (19)0.97077 (17)0.76771 (15)0.0303 (3)
C170.6418 (2)0.93040 (19)0.87463 (16)0.0347 (4)
C180.5274 (2)0.8447 (2)0.92798 (18)0.0406 (4)
H180.55600.81801.00140.049*
C190.3692 (2)0.79842 (19)0.87168 (19)0.0416 (4)
H190.28720.73980.90740.050*
C200.3288 (2)0.83647 (19)0.76392 (19)0.0427 (4)
H200.21940.80250.72540.051*
C210.4458 (2)0.92345 (18)0.71169 (17)0.0364 (4)
H210.41750.95040.63830.044*
U11U22U33U12U13U23
S10.0368 (2)0.0274 (2)0.0298 (2)0.01355 (17)0.00040 (16)0.00423 (16)
O10.0240 (5)0.0359 (6)0.0295 (6)0.0102 (5)0.0022 (4)0.0111 (5)
O20.0506 (7)0.0417 (7)0.0430 (7)0.0253 (6)0.0040 (6)0.0176 (6)
F10.0376 (6)0.0818 (8)0.0353 (6)0.0238 (6)−0.0011 (5)0.0229 (6)
C10.0276 (7)0.0260 (7)0.0232 (7)0.0083 (6)0.0021 (6)0.0069 (6)
C20.0277 (7)0.0251 (7)0.0236 (7)0.0093 (6)0.0038 (6)0.0103 (6)
C30.0269 (7)0.0264 (7)0.0289 (8)0.0086 (6)0.0019 (6)0.0095 (6)
C40.0321 (8)0.0245 (7)0.0309 (8)0.0073 (6)0.0003 (6)0.0079 (6)
C50.0426 (10)0.0276 (8)0.0342 (9)0.0141 (7)0.0030 (7)0.0019 (7)
C60.0348 (9)0.0368 (9)0.0368 (9)0.0183 (7)0.0077 (7)0.0099 (7)
C70.0255 (7)0.0300 (7)0.0257 (7)0.0084 (6)0.0027 (6)0.0113 (6)
C80.0293 (8)0.0299 (8)0.0250 (8)0.0085 (6)0.0033 (6)0.0121 (6)
C90.0364 (9)0.0224 (7)0.0396 (9)0.0068 (7)−0.0048 (7)0.0019 (7)
C100.0337 (9)0.0483 (10)0.0296 (9)0.0080 (8)0.0040 (7)0.0126 (8)
C110.0410 (11)0.0669 (13)0.0342 (10)0.0092 (10)−0.0038 (8)0.0129 (9)
C120.0332 (9)0.0543 (12)0.0502 (11)0.0084 (9)−0.0025 (8)0.0155 (9)
C130.0379 (10)0.0543 (12)0.0627 (13)−0.0061 (9)−0.0035 (9)0.0294 (11)
C140.0390 (10)0.0554 (12)0.0464 (11)−0.0057 (9)−0.0023 (8)0.0284 (10)
C150.0306 (8)0.0394 (9)0.0329 (9)0.0057 (7)−0.0051 (7)0.0105 (7)
C160.0345 (8)0.0312 (8)0.0251 (8)0.0169 (7)0.0036 (6)0.0032 (6)
C170.0350 (9)0.0408 (9)0.0278 (8)0.0187 (7)0.0014 (7)0.0050 (7)
C180.0502 (11)0.0438 (10)0.0353 (9)0.0257 (9)0.0104 (8)0.0128 (8)
C190.0426 (10)0.0317 (9)0.0494 (11)0.0152 (8)0.0149 (8)0.0083 (8)
C200.0329 (9)0.0373 (9)0.0525 (11)0.0149 (8)−0.0001 (8)0.0048 (8)
C210.0369 (9)0.0364 (9)0.0349 (9)0.0186 (7)−0.0021 (7)0.0053 (7)
S1—O21.4823 (12)C11—C121.508 (3)
S1—C11.7516 (15)C11—H11A0.9900
S1—C161.7988 (17)C11—H11B0.9900
O1—C81.3647 (19)C12—C131.506 (3)
O1—C71.3790 (18)C12—H12A0.9900
F1—C171.3569 (19)C12—H12B0.9900
C1—C81.351 (2)C13—C141.527 (3)
C1—C21.447 (2)C13—H13A0.9900
C2—C31.392 (2)C13—H13B0.9900
C2—C71.395 (2)C14—H14A0.9900
C3—C41.392 (2)C14—H14B0.9900
C3—H30.9500C15—H15A0.9800
C4—C51.403 (2)C15—H15B0.9800
C4—C91.513 (2)C15—H15C0.9800
C5—C61.381 (2)C16—C171.379 (2)
C5—H50.9500C16—C211.383 (2)
C6—C71.371 (2)C17—C181.368 (3)
C6—H60.9500C18—C191.380 (3)
C8—C151.479 (2)C18—H180.9500
C9—C101.524 (2)C19—C201.382 (3)
C9—C141.527 (3)C19—H190.9500
C9—H91.0000C20—C211.381 (3)
C10—C111.522 (2)C20—H200.9500
C10—H10A0.9900C21—H210.9500
C10—H10B0.9900
O2—S1—C1108.76 (7)C10—C11—H11B109.3
O2—S1—C16106.28 (8)H11A—C11—H11B107.9
C1—S1—C1697.18 (7)C13—C12—C11111.76 (17)
C8—O1—C7106.55 (11)C13—C12—H12A109.3
C8—C1—C2107.67 (13)C11—C12—H12A109.3
C8—C1—S1122.41 (12)C13—C12—H12B109.3
C2—C1—S1129.89 (11)C11—C12—H12B109.3
C3—C2—C7119.50 (14)H12A—C12—H12B107.9
C3—C2—C1136.36 (14)C12—C13—C14111.52 (15)
C7—C2—C1104.13 (13)C12—C13—H13A109.3
C2—C3—C4118.59 (14)C14—C13—H13A109.3
C2—C3—H3120.7C12—C13—H13B109.3
C4—C3—H3120.7C14—C13—H13B109.3
C3—C4—C5119.45 (15)H13A—C13—H13B108.0
C3—C4—C9121.17 (14)C9—C14—C13111.25 (17)
C5—C4—C9119.38 (14)C9—C14—H14A109.4
C6—C5—C4122.89 (15)C13—C14—H14A109.4
C6—C5—H5118.6C9—C14—H14B109.4
C4—C5—H5118.6C13—C14—H14B109.4
C7—C6—C5116.01 (15)H14A—C14—H14B108.0
C7—C6—H6122.0C8—C15—H15A109.5
C5—C6—H6122.0C8—C15—H15B109.5
C6—C7—O1125.80 (14)H15A—C15—H15B109.5
C6—C7—C2123.52 (15)C8—C15—H15C109.5
O1—C7—C2110.68 (13)H15A—C15—H15C109.5
C1—C8—O1110.97 (13)H15B—C15—H15C109.5
C1—C8—C15132.96 (15)C17—C16—C21119.06 (16)
O1—C8—C15116.03 (13)C17—C16—S1120.14 (13)
C4—C9—C10112.40 (13)C21—C16—S1120.71 (13)
C4—C9—C14113.24 (14)F1—C17—C18119.26 (15)
C10—C9—C14109.31 (14)F1—C17—C16118.10 (15)
C4—C9—H9107.2C18—C17—C16122.63 (16)
C10—C9—H9107.2C17—C18—C19117.89 (17)
C14—C9—H9107.2C17—C18—H18121.1
C11—C10—C9111.29 (15)C19—C18—H18121.1
C11—C10—H10A109.4C18—C19—C20120.65 (17)
C9—C10—H10A109.4C18—C19—H19119.7
C11—C10—H10B109.4C20—C19—H19119.7
C9—C10—H10B109.4C21—C20—C19120.64 (17)
H10A—C10—H10B108.0C21—C20—H20119.7
C12—C11—C10111.80 (16)C19—C20—H20119.7
C12—C11—H11A109.3C20—C21—C16119.12 (16)
C10—C11—H11A109.3C20—C21—H21120.4
C12—C11—H11B109.3C16—C21—H21120.4
O2—S1—C1—C8131.20 (13)C7—O1—C8—C15178.13 (12)
C16—S1—C1—C8−118.85 (14)C3—C4—C9—C1075.69 (19)
O2—S1—C1—C2−46.74 (16)C5—C4—C9—C10−104.29 (18)
C16—S1—C1—C263.21 (15)C3—C4—C9—C14−48.8 (2)
C8—C1—C2—C3178.69 (16)C5—C4—C9—C14131.23 (17)
S1—C1—C2—C3−3.1 (3)C4—C9—C10—C11176.45 (15)
C8—C1—C2—C7−0.48 (16)C14—C9—C10—C11−56.9 (2)
S1—C1—C2—C7177.70 (12)C9—C10—C11—C1255.9 (2)
C7—C2—C3—C40.9 (2)C10—C11—C12—C13−53.9 (2)
C1—C2—C3—C4−178.16 (16)C11—C12—C13—C1453.8 (3)
C2—C3—C4—C5−1.5 (2)C4—C9—C14—C13−176.82 (15)
C2—C3—C4—C9178.51 (14)C10—C9—C14—C1357.0 (2)
C3—C4—C5—C60.5 (3)C12—C13—C14—C9−56.0 (2)
C9—C4—C5—C6−179.48 (15)O2—S1—C16—C17−174.67 (12)
C4—C5—C6—C71.0 (2)C1—S1—C16—C1773.34 (14)
C5—C6—C7—O1177.69 (14)O2—S1—C16—C211.70 (15)
C5—C6—C7—C2−1.7 (2)C1—S1—C16—C21−110.29 (14)
C8—O1—C7—C6−179.97 (15)C21—C16—C17—F1−179.18 (14)
C8—O1—C7—C2−0.55 (15)S1—C16—C17—F1−2.8 (2)
C3—C2—C7—C60.7 (2)C21—C16—C17—C180.1 (2)
C1—C2—C7—C6−179.93 (14)S1—C16—C17—C18176.54 (13)
C3—C2—C7—O1−178.71 (12)F1—C17—C18—C19178.98 (15)
C1—C2—C7—O10.63 (16)C16—C17—C18—C19−0.3 (3)
C2—C1—C8—O10.17 (17)C17—C18—C19—C200.7 (3)
S1—C1—C8—O1−178.18 (10)C18—C19—C20—C21−1.0 (3)
C2—C1—C8—C15−177.26 (15)C19—C20—C21—C160.8 (3)
S1—C1—C8—C154.4 (2)C17—C16—C21—C20−0.3 (2)
C7—O1—C8—C10.23 (16)S1—C16—C21—C20−176.75 (12)
D—H···AD—HH···AD···AD—H···A
C3—H3···O2i0.952.603.5024 (19)160
C20—H20···O1ii0.952.533.316 (2)140
C21—H21···O2i0.952.493.332 (2)148
C14—H14B···Cg2iii0.992.693.618 (2)156
C15—H15B···Cg2iv0.982.853.422 (2)118
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 is the centroid of the C2–C7 benzene ring.

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3⋯O2i 0.952.603.5024 (19)160
C20—H20⋯O1ii 0.952.533.316 (2)140
C21—H21⋯O2i 0.952.493.332 (2)148
C14—H14BCg2iii 0.992.693.618 (2)156
C15—H15BCg2iv 0.982.853.422 (2)118

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  5-Cyclo-hexyl-3-(4-fluoro-phenyl-sulfin-yl)-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-02

3.  3-(4-Bromo-phenyl-sulfin-yl)-5-cyclo-hexyl-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-21
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.