| Literature DB >> 23794404 |
Christoph K Winkler1, Dorina Clay, Esta van Heerden, Kurt Faber.
Abstract
Eleven flavoproteins from the old yellow enzyme family were found to catalyze the disproportionation ("dismutation") of conjugated enones. Incomplete conversions, which were attributed to enzyme inhibition by the co-product phenol could be circumvented via in situ co-product removal by scavenging the phenol using the polymeric adsorbent MP-carbonate. The optimized system allowed to reduce an alkene activated by ester groups in a "coupled-substrate" approach via nicotinamide-free hydrogen transfer with >90% conversion and complete stereoselectivity.Entities:
Keywords: disproportionation; ene-reductase; in situ co-product removal; old yellow enzyme
Mesh:
Substances:
Year: 2013 PMID: 23794404 PMCID: PMC4034509 DOI: 10.1002/bit.24981
Source DB: PubMed Journal: Biotechnol Bioeng ISSN: 0006-3592 Impact factor: 4.530
Figure 1Ene-reductase catalyzed disproportionation of cyclohex-2-enone (1a).
Figure 2NAD(P)H-independent bioreduction of alkenes 2a–4a at the expense of H-donors 5c or 6c in presence of MP-carbonate as phenol-scavenger.
Aerobic and anaerobic enzymatic disproportionation of cyclohex-2-enone (1a)
| Enzyme | Aerobic | Anaerobic | |||
|---|---|---|---|---|---|
| pH 7.5 | pH 9 | pH 7.5 | pH 9 | ||
| Column | A | B | C | D | |
| c. (%) | c. (%) | epox. (%) | c. (%) | c. (%) | |
| OYE1 | 58 ± 7 | 63 ± 6 | <1 | 63 ± 10 | 64 ± 8 |
| OYE2 | 61 ± 7 | 66 ± 7 | <1 | 67 ± 8 | 65 ± 6 |
| OYE3 | 7 ± 2 | 8 ± 1 | <1 | n.d. | n.d. |
| CrS | 55 ± 4 | 56 ± 8 | 5 ± 3 | 62 ± 6 | 60 ± 6 |
| EBP1 | 22 ± 7 | 28 ± 6 | <1 | 25 ± 6 | 26 ± 6 |
| NCR | 6 ± 1 | 20 ± 2 | <1 | 8 ± 1 | 17 ± 7 |
| XenA | 5 ± 1 | 8 ± 2 | <1 | 7 ± 3 | 14 ± 4 |
| YqjM | 4 ± 1 | 2 ± 0 | <1 | 4 ± 1 | 1 ± 0 |
| OPR3 | 3 ± 0 | 4 ± 1 | <1 | n.d. | n.d. |
| NerA | 10 ± 6 | 10 ± 5 | <1 | n.d. | n.d. |
| 10 ± 1 | 16 ± 2 | <1 | n.d. | n.d. | |
12-Oxophytodienoate reductase isoenzymes OPR1 and OPR3 (Lycopersicon esculentum), YqjM (Bacillus subtilis), OYE1 (Saccharomyces pastorianus), OYE2 and OYE3 (Saccharomyces cerevisiae), nicotinamide-dependent cyclohexenone reductase NCR (Zymomonas mobilis), xenobiotic reductases XenA (Pseudomonas putida) and XenB (Pseudomonas fluorescens), glycerol trinitrate reductase NerA (Agrobacterium radiobacter), Kluyveromyces lactis yellow enzyme 1 KYE1, Yersinia bercovieri ene-reductase YersER, nitroreductase NRSal (Salmonella typhimurium), N-ethylmaleimide reductase NemR (Escherichia coli), pentaerythritol tetranitrate reductase PETNr (Enterobacter cloacae PB2), morphinone reductase MR (P. putida M10), estrogen-binding protein EBP1 (Candida albicans), YcnD and YhdA (B. subtilis), Lot6p (S. cerevisiae), GkOYE (Geobacillus kaustophilus DSM 7263), CrS (Thermus scotoductus SA-01); conversions of ≤1% were detected with OPR1, XenB, NemR, PETNr, YcnD, Lot6P, YhdA, KYE1, MR, YersER, and NRSal.
The reaction was performed according to method A (columns A and B) or method B (columns C and D) using degassed buffer in glass vials which were flushed with argon and sealed with a screw cap lined with a teflon septum. c., conversion; epox, epoxide formed via nonenzymatic Weitz–Scheffer epoxidation; n.d., not determined.
Figure 3Optimization of buffer-system and pH for the enzymatic disproportionation of cyclohex-2-enone (1a) according to method A. pH 4–6: citrate buffer (50 mM); pH 6–8: phosphate buffer (50 mM); pH 7–10: Tris–HCl buffer (50 mM). Standard conditions: protein content 100 µg/mL; 10 mM 1a; shaking at 120 rpm at 30°C for 24 h.
Figure 4Schematic representation of phenolate binding onto MP-carbonate through π–π stacking and salt bridge.
Enzymatic disproportionation of cyclohex-2-enone (1a) in presence of MP-carbonate as phenol scavenger (40-fold loading capacity) according to method C
| Enzyme | pH 7.5 c. (%) | pH 9 c. (%) |
|---|---|---|
| OYE1 | 68 ± 9 | 74 ± 3 |
| XenA | 18 ± 4 | 25 ± 7 |
| OYE2 | 89 ± 4 | 90 ± 1 |
| CrS | 93 ± 1 | 97 ± 1 |
Nicotinamide-independent asymmetric bioreduction of activated alkenes (method C)
| Entry | Substrate | Donor | Enzyme | pH | MP-C (eq.) | Conversion (%) | e.e. (%) |
|---|---|---|---|---|---|---|---|
| 1 | OYE1 | 7.5 | 0 | 3 ± 0 | 74 ± 3 ( | ||
| 2 | OYE1 | 9 | 0 | 12 ± 5 | 16 ± 3 ( | ||
| 3 | XenA | 7.5 | 0 | 7 ± 1 | 67 ± 1 ( | ||
| 4 | XenA | 9 | 0 | 16 ± 2 | 10 ± 5 ( | ||
| 5 | OYE1 | 7.5 | 0 | 2 ± 0 | 69 ± 2 ( | ||
| 6 | OYE1 | 9 | 0 | 4 ± 1 | 21 ± 1 ( | ||
| 7 | XenA | 7.5 | 0 | 8 ± 2 | 66 ± 3 ( | ||
| 8 | XenA | 9 | 0 | 18 ± 2 | |||
| 9 | OYE1 | 9 | 40 | 66 ± 5 | |||
| 10 | XenA | 9 | 40 | 45 ± 12 | |||
| 11 | NerA | 9 | 40 | ||||
| 12 | 9 | 40 | |||||
| 13 | CrS | 9 | 40 | 81 ± 2 | |||
| 14 | OYE1 | 9 | 40 | 13 ± 5 | |||
| 15 | XenA | 9 | 40 | 33 ± 12 | |||
| 16 | 9 | 40 | |||||
| 17 | CrS | 9 | 40 | ||||
| 18 | 9 | 40 | 14 ± 4 | >99 ± 0 ( | |||
| 19 | CrS | 9 | 40 | ||||
| 20 | 9 | 40 | 7 ± 1 | >99 ± 0 ( | |||
| 21 | CrS | 9 | 40 | 23 ± 1 | >99 ± 0 ( |
Loading capacity of MP-carbonate.
Optimization of NAD(P)H-independent asymmetric bioreduction of 2a and 3a using CrS at pH 9 and MP-carbonate (40 eq. loading capacity) according to method C
| Entry | Substrate | Donor | Enzyme amount (µg) | Time (h) | Temp. (°C) | Conversion (%) | e.e. (%) |
|---|---|---|---|---|---|---|---|
| 1 | 100 | 24 | 30 | 97 ± 0 | |||
| 2 | 24 | 30 | |||||
| 3 | 100 | 30 | |||||
| 4 | 100 | 24 | |||||
| 5 | 100 | 24 | 30 | 47 ± 8 | >99 | ||
| 6 | 24 | 30 | 59 ± 2 | >99 | |||
| 7 | 24 | 30 | 76 ± 6 | >99 | |||
| 8 | 30 |