Literature DB >> 23769966

Advances in understanding the molecular basis of plant cell wall polysaccharide recognition by carbohydrate-binding modules.

Harry J Gilbert1, J Paul Knox, Alisdair B Boraston.   

Abstract

Plant cell walls are complex configurations of polysaccharides that are recalcitrant to degradation. The enzymes deployed by microbes to degrade these materials comprise glycoside hydrolases, polysaccharide lyases, carbohydrate esterases and polysaccharide oxidases. Non-catalytic carbohydrate-binding modules (CBMs) are found as discretely folded units within the multi-modular structures of these enzymes where they play critical roles in the recognition of plant cell wall components and potentiating the activity of the enzymes. Here we propose a refinement to the Types A, B, and C classification of CBMs whereby the Type A CBMs remain those that bind the surfaces of crystalline polysaccharides but the Type B CBMs are redefined as those that bind internally on glycan chains (endo-type), CBMs that bind to the termini of glycan chains are defined as Type C modules (exo-type). In this context, we discuss recent advances, primarily driven by structural studies, which reveal the molecular modes of CBM-sugar interactions and how this specifically underpins and influences the biological function of CBMs in cell wall recognition and degradation.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23769966     DOI: 10.1016/j.sbi.2013.05.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  90 in total

1.  A carbohydrate-binding family 48 module enables feruloyl esterase action on polymeric arabinoxylan.

Authors:  Jesper Holck; Folmer Fredslund; Marie S Møller; Jesper Brask; Kristian B R M Krogh; Lene Lange; Ditte H Welner; Birte Svensson; Anne S Meyer; Casper Wilkens
Journal:  J Biol Chem       Date:  2019-09-26       Impact factor: 5.157

2.  Exploring Multimodularity in Plant Cell Wall Deconstruction: STRUCTURAL AND FUNCTIONAL ANALYSIS OF Xyn10C CONTAINING THE CBM22-1-CBM22-2 TANDEM.

Authors:  M Angela Sainz-Polo; Beatriz González; Margarita Menéndez; F I Javier Pastor; Julia Sanz-Aparicio
Journal:  J Biol Chem       Date:  2015-05-22       Impact factor: 5.157

3.  Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of Paenibacillus barcinonensis xylanase 10C containing the CBM22-1-CBM22-2 tandem.

Authors:  María Ángela Sainz-Polo; Beatriz González; F I Javier Pastor; Julia Sanz-Aparicio
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-01-28       Impact factor: 1.056

Review 4.  Physiological and Molecular Understanding of Bacterial Polysaccharide Monooxygenases.

Authors:  Marco Agostoni; John A Hangasky; Michael A Marletta
Journal:  Microbiol Mol Biol Rev       Date:  2017-06-28       Impact factor: 11.056

5.  Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to α-l-fucosidases from GH29.

Authors:  Chelsea Vickers; Feng Liu; Kento Abe; Orly Salama-Alber; Meredith Jenkins; Christopher M K Springate; John E Burke; Stephen G Withers; Alisdair B Boraston
Journal:  J Biol Chem       Date:  2018-10-03       Impact factor: 5.157

6.  Effects of active site cleft residues on oligosaccharide binding, hydrolysis, and glycosynthase activities of rice BGlu1 and its mutants.

Authors:  Salila Pengthaisong; James R Ketudat Cairns
Journal:  Protein Sci       Date:  2014-10-23       Impact factor: 6.725

7.  Amino Groups of Chitosan Are Crucial for Binding to a Family 32 Carbohydrate Binding Module of a Chitosanase from Paenibacillus elgii.

Authors:  Subha Narayan Das; Martin Wagenknecht; Pavan Kumar Nareddy; Bhoopal Bhuvanachandra; Ramana Niddana; Rengarajan Balamurugan; Musti J Swamy; Bruno M Moerschbacher; Appa Rao Podile
Journal:  J Biol Chem       Date:  2016-07-12       Impact factor: 5.157

8.  Structural analysis of glucuronoxylan-specific Xyn30D and its attached CBM35 domain gives insights into the role of modularity in specificity.

Authors:  M Angela Sainz-Polo; Susana Valeria Valenzuela; Beatriz González; F I Javier Pastor; Julia Sanz-Aparicio
Journal:  J Biol Chem       Date:  2014-09-08       Impact factor: 5.157

Review 9.  Microbial Glucuronoyl Esterases: 10 Years after Discovery.

Authors:  Peter Biely
Journal:  Appl Environ Microbiol       Date:  2016-11-21       Impact factor: 4.792

10.  A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties.

Authors:  Bruna Medeia Campos; Marcelo Vizona Liberato; Thabata Maria Alvarez; Letícia Maria Zanphorlin; Gabriela Cristina Ematsu; Hernane Barud; Igor Polikarpov; Roberto Ruller; Harry J Gilbert; Ana Carolina de Mattos Zeri; Fabio Marcio Squina
Journal:  J Biol Chem       Date:  2016-09-12       Impact factor: 5.157

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