Literature DB >> 23769130

Design-based stereology: Planning, volumetry and sampling are crucial steps for a successful study.

Stefan Tschanz1, Jan Philipp Schneider2, Lars Knudsen3.   

Abstract

Quantitative data obtained by means of design-based stereology can add valuable information to studies performed on a diversity of organs, in particular when correlated to functional/physiological and biochemical data. Design-based stereology is based on a sound statistical background and can be used to generate accurate data which are in line with principles of good laboratory practice. In addition, by adjusting the study design an appropriate precision can be achieved to find relevant differences between groups. For the success of the stereological assessment detailed planning is necessary. In this review we focus on common pitfalls encountered during stereological assessment. An exemplary workflow is included, and based on authentic examples, we illustrate a number of sampling principles which can be implemented to obtain properly sampled tissue blocks for various purposes.
Copyright © 2013 Elsevier GmbH. All rights reserved.

Keywords:  Cavalieri method; Design-based stereology; Fractionator; Systematic uniform random sample; Volumetry

Mesh:

Year:  2013        PMID: 23769130     DOI: 10.1016/j.aanat.2013.04.011

Source DB:  PubMed          Journal:  Ann Anat        ISSN: 0940-9602            Impact factor:   2.698


  27 in total

1.  From gross anatomy to the nanomorphome: stereological tools provide a paradigm for advancing research in quantitative morphomics.

Authors:  Terry M Mayhew; John M Lucocq
Journal:  J Anat       Date:  2015-03-09       Impact factor: 2.610

2.  Alveolar Micromechanics in Bleomycin-induced Lung Injury.

Authors:  Lars Knudsen; Elena Lopez-Rodriguez; Lennart Berndt; Lilian Steffen; Clemens Ruppert; Jason H T Bates; Matthias Ochs; Bradford J Smith
Journal:  Am J Respir Cell Mol Biol       Date:  2018-12       Impact factor: 6.914

3.  Sampling Strategies and Processing of Biobank Tissue Samples from Porcine Biomedical Models.

Authors:  Andreas Blutke; Rüdiger Wanke
Journal:  J Vis Exp       Date:  2018-03-06       Impact factor: 1.355

4.  Stereological assessment of the blood-air barrier and the surfactant system after mesenchymal stem cell pretreatment in a porcine non-heart-beating donor model for lung transplantation.

Authors:  Anke Schnapper; Astrid Christmann; Lars Knudsen; Parwis Rahmanian; Yeong-Hoon Choi; Mohamed Zeriouh; Samira Karavidic; Klaus Neef; Anja Sterner-Kock; Maria Guschlbauer; Florian Hofmaier; Alexandra C Maul; Thorsten Wittwer; Thorsten Wahlers; Christian Mühlfeld; Matthias Ochs
Journal:  J Anat       Date:  2017-11-28       Impact factor: 2.610

5.  MAP1LC3B overexpression protects against Hermansky-Pudlak syndrome type-1-induced defective autophagy in vitro.

Authors:  Saket Ahuja; Lars Knudsen; Shashi Chillappagari; Ingrid Henneke; Clemens Ruppert; Martina Korfei; Bernadette R Gochuico; Saverio Bellusci; Werner Seeger; Matthias Ochs; Andreas Guenther; Poornima Mahavadi
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2015-12-30       Impact factor: 5.464

6.  Aberrant lung remodeling in a mouse model of surfactant dysregulation induced by modulation of the Abca3 gene.

Authors:  Michael F Beers; Lars Knudsen; Yaniv Tomer; Julian Maronn; Ming Zhao; Matthias Ochs; Surafel Mulugeta
Journal:  Ann Anat       Date:  2016-12-26       Impact factor: 2.698

7.  Susceptibility of microtubule-associated protein 1 light chain 3β (MAP1LC3B/LC3B) knockout mice to lung injury and fibrosis.

Authors:  Vidya Sagar Kesireddy; Shashi Chillappagari; Saket Ahuja; Lars Knudsen; Ingrid Henneke; Johannes Graumann; Silke Meiners; Matthias Ochs; Clemens Ruppert; Martina Korfei; Werner Seeger; Poornima Mahavadi
Journal:  FASEB J       Date:  2019-08-20       Impact factor: 5.191

8.  The number of cardiac myocytes in the hypertrophic and hypotrophic left ventricle of the obese and calorie-restricted mouse heart.

Authors:  Julia Schipke; Ewgenija Banmann; Sandeep Nikam; Robert Voswinckel; Karin Kohlstedt; Annemarieke E Loot; Ingrid Fleming; Christian Mühlfeld
Journal:  J Anat       Date:  2014-11       Impact factor: 2.610

9.  The role of inducible nitric oxide synthase for interstitial remodeling of alveolar septa in surfactant protein D-deficient mice.

Authors:  Lars Knudsen; Elena N Atochina-Vasserman; Christopher B Massa; Bastian Birkelbach; Chang-Jiang Guo; Pamela Scott; Beat Haenni; Michael F Beers; Matthias Ochs; Andrew J Gow
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2015-08-28       Impact factor: 5.464

Review 10.  Nanoparticle delivery system, highly active antiretroviral therapy, and testicular morphology: The role of stereology.

Authors:  Edwin Coleridge S Naidu; Samuel Oluwaseun Olojede; Sodiq Kolawole Lawal; Carmen Olivia Rennie; Onyemaechi Okpara Azu
Journal:  Pharmacol Res Perspect       Date:  2021-05
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