Literature DB >> 23762893

Synchrotron Fourier transform infrared (FTIR) analysis of single living cells progressing through the cell cycle.

Donna R Whelan1, Keith R Bambery, Ljiljana Puskar, Don McNaughton, Bayden R Wood.   

Abstract

The application of FTIR spectroscopy to disease diagnosis requires a thorough knowledge of the spectroscopy associated with the cell cycle to discern disease markers from normal cellular events. We have applied synchrotron FTIR spectroscopy to monitor cells at different phases of the cell cycle namely G1, S and G2 phases. By applying Principal component analysis (PCA) from three independent trials we show clustering on a 2-dimensional scores plots (PC1 versus PC2) from cell spectra only two hours apart within the cell cycle. The corresponding PCA Loadings Plots indicate the clustering is primarily based on changes to the overall concentration of nucleic acids, proteins and lipids. During the first ten hours post mitosis, cells are observed to increase in protein and decrease in both lipid and nucleic acid concentration. During the synthesis phase, (beginning 9-11 hours post-mitosis) the PCA Loadings Plots show the accumulation of lipids within the cell as well the duplication of the genome as evidenced by strong DNA contributions. In the 4-6 hours following the synthesis phase, the cells once again accumulate protein while the relative nucleic acid and lipid concentrations decrease. These results, in comparison to previous studies on dehydrated cells, show previously unresolvable biochemical information as well as highlighting the advantages of FTIR spectroscopy applied to single living cells.

Entities:  

Mesh:

Year:  2013        PMID: 23762893     DOI: 10.1039/c3an00316g

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  12 in total

1.  Overview of the second super-resolution microscopy session of the joint Asian Biophysics Association/Australian Society for Biophysics meeting.

Authors:  Donna R Whelan
Journal:  Biophys Rev       Date:  2019-05-14

Review 2.  Opportunities for live cell FT-infrared imaging: macromolecule identification with 2D and 3D localization.

Authors:  Eric C Mattson; Ebrahim Aboualizadeh; Marie E Barabas; Cheryl L Stucky; Carol J Hirschmugl
Journal:  Int J Mol Sci       Date:  2013-11-19       Impact factor: 5.923

3.  A FTIR imaging characterization of fibroblasts stimulated by various breast cancer cell lines.

Authors:  Saroj Kumar; Thankaraj Salammal Shabi; Erik Goormaghtigh
Journal:  PLoS One       Date:  2014-11-12       Impact factor: 3.240

4.  Importance of tissue preparation methods in FTIR micro-spectroscopical analysis of biological tissues: 'traps for new users'.

Authors:  Vladislava Zohdi; Donna R Whelan; Bayden R Wood; James T Pearson; Keith R Bambery; M Jane Black
Journal:  PLoS One       Date:  2015-02-24       Impact factor: 3.240

Review 5.  Vibrational Spectroscopy Fingerprinting in Medicine: from Molecular to Clinical Practice.

Authors:  Vera Balan; Cosmin-Teodor Mihai; Florina-Daniela Cojocaru; Cristina-Mariana Uritu; Gianina Dodi; Doru Botezat; Ioannis Gardikiotis
Journal:  Materials (Basel)       Date:  2019-09-06       Impact factor: 3.623

6.  Using Fourier transform IR spectroscopy to analyze biological materials.

Authors:  Matthew J Baker; Júlio Trevisan; Paul Bassan; Rohit Bhargava; Holly J Butler; Konrad M Dorling; Peter R Fielden; Simon W Fogarty; Nigel J Fullwood; Kelly A Heys; Caryn Hughes; Peter Lasch; Pierre L Martin-Hirsch; Blessing Obinaju; Ganesh D Sockalingum; Josep Sulé-Suso; Rebecca J Strong; Michael J Walsh; Bayden R Wood; Peter Gardner; Francis L Martin
Journal:  Nat Protoc       Date:  2014-07-03       Impact factor: 13.491

7.  Detection of an en masse and reversible B- to A-DNA conformational transition in prokaryotes in response to desiccation.

Authors:  Donna R Whelan; Thomas J Hiscox; Julian I Rood; Keith R Bambery; Don McNaughton; Bayden R Wood
Journal:  J R Soc Interface       Date:  2014-08-06       Impact factor: 4.118

8.  Microfluidic approaches to synchrotron radiation-based Fourier transform infrared (SR-FTIR) spectral microscopy of living biosystems.

Authors:  Kevin Loutherback; Giovanni Birarda; Liang Chen; Hoi-Ying N Holman
Journal:  Protein Pept Lett       Date:  2016       Impact factor: 1.890

9.  Detection of mycoplasma in contaminated mammalian cell culture using FTIR microspectroscopy.

Authors:  Katia Wehbe; Marzia Vezzalini; Gianfelice Cinque
Journal:  Anal Bioanal Chem       Date:  2018-03-17       Impact factor: 4.142

10.  Distinguishing Ewing sarcoma and osteomyelitis using FTIR spectroscopy.

Authors:  Radosław Chaber; Christopher J Arthur; Joanna Depciuch; Kornelia Łach; Anna Raciborska; Elżbieta Michalak; Józef Cebulski
Journal:  Sci Rep       Date:  2018-10-10       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.