Literature DB >> 23760169

Revisiting the impacts of non-random extinction on the tree-of-life.

T Jonathan Davies1, Kowiyou Yessoufou.   

Abstract

The tree-of-life represents the diversity of living organisms. Species extinction and the concomitant loss of branches from the tree-of-life is therefore a major conservation concern. There is increasing evidence indicating that extinction is phylogenetically non-random, such that if one species is vulnerable to extinction so too are its close relatives. However, the impact of non-random extinctions on the tree-of-life has been a matter of recent debate. Here, we combine simulations with empirical data on extinction risk in mammals. We demonstrate that phylogenetically clustered extinction leads to a disproportionate loss of branches from the tree-of-life, but that the loss of their summed lengths is indistinguishable from random extinction. We argue that under a speciational model of evolution, the number of branches lost might be of equal or greater consequences than the loss of summed branch lengths. We therefore suggest that the impact of non-random extinction on the tree-of-life may have been underestimated.

Keywords:  extinction; phylogenetic diversity; punctuated evolution; tree-of-life

Mesh:

Year:  2013        PMID: 23760169      PMCID: PMC3730646          DOI: 10.1098/rsbl.2013.0343

Source DB:  PubMed          Journal:  Biol Lett        ISSN: 1744-9561            Impact factor:   3.703


  25 in total

1.  Nonrandom extinction and the loss of evolutionary history.

Authors:  A Purvis; P M Agapow; J L Gittleman; G M Mace
Journal:  Science       Date:  2000-04-14       Impact factor: 47.728

2.  Predicting extinction risk in declining species.

Authors:  A Purvis; J L Gittleman; G Cowlishaw; G M Mace
Journal:  Proc Biol Sci       Date:  2000-10-07       Impact factor: 5.349

3.  Preserving the evolutionary potential of floras in biodiversity hotspots.

Authors:  Félix Forest; Richard Grenyer; Mathieu Rouget; T Jonathan Davies; Richard M Cowling; Daniel P Faith; Andrew Balmford; John C Manning; Serban Procheş; Michelle van der Bank; Gail Reeves; Terry A J Hedderson; Vincent Savolainen
Journal:  Nature       Date:  2007-02-15       Impact factor: 49.962

4.  GEIGER: investigating evolutionary radiations.

Authors:  Luke J Harmon; Jason T Weir; Chad D Brock; Richard E Glor; Wendell Challenger
Journal:  Bioinformatics       Date:  2007-11-15       Impact factor: 6.937

5.  Phylogenetic distributions of British birds of conservation concern.

Authors:  Gavin H Thomas
Journal:  Proc Biol Sci       Date:  2008-09-22       Impact factor: 5.349

6.  Evolutionary history and the effect of biodiversity on plant productivity.

Authors:  Marc W Cadotte; Bradley J Cardinale; Todd H Oakley
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-29       Impact factor: 11.205

7.  Extant mammal body masses suggest punctuated equilibrium.

Authors:  Tiina M Mattila; Folmer Bokma
Journal:  Proc Biol Sci       Date:  2008-10-07       Impact factor: 5.349

8.  Colloquium paper: phylogenetic trees and the future of mammalian biodiversity.

Authors:  T Jonathan Davies; Susanne A Fritz; Richard Grenyer; C David L Orme; Jon Bielby; Olaf R P Bininda-Emonds; Marcel Cardillo; Kate E Jones; John L Gittleman; Georgina M Mace; Andy Purvis
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-11       Impact factor: 11.205

9.  The predictability of extinction: biological and external correlates of decline in mammals.

Authors:  Marcel Cardillo; Georgina M Mace; John L Gittleman; Kate E Jones; Jon Bielby; Andy Purvis
Journal:  Proc Biol Sci       Date:  2008-06-22       Impact factor: 5.349

10.  Converting endangered species categories to probabilities of extinction for phylogenetic conservation prioritization.

Authors:  Arne Ø Mooers; Daniel P Faith; Wayne P Maddison
Journal:  PLoS One       Date:  2008-11-11       Impact factor: 3.240

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  5 in total

1.  Losing history: how extinctions prune features from the tree of life.

Authors:  T Jonathan Davies
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-02-19       Impact factor: 6.237

2.  Co-extinction in a host-parasite network: identifying key hosts for network stability.

Authors:  Tad Dallas; Emily Cornelius
Journal:  Sci Rep       Date:  2015-08-17       Impact factor: 4.379

3.  Integrating biogeography, threat and evolutionary data to explore extinction crisis in the taxonomic group of cycads.

Authors:  Kowiyou Yessoufou; Barnabas H Daru; Respinah Tafirei; Hosam O Elansary; Isaac Rampedi
Journal:  Ecol Evol       Date:  2017-03-21       Impact factor: 2.912

4.  Geography of current and future global mammal extinction risk.

Authors:  Ana D Davidson; Kevin T Shoemaker; Ben Weinstein; Gabriel C Costa; Thomas M Brooks; Gerardo Ceballos; Volker C Radeloff; Carlo Rondinini; Catherine H Graham
Journal:  PLoS One       Date:  2017-11-16       Impact factor: 3.240

5.  Factors driving the global decline of cycad diversity.

Authors:  Ledile T Mankga; Kowiyou Yessoufou
Journal:  AoB Plants       Date:  2017-05-29       Impact factor: 3.276

  5 in total

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