Literature DB >> 23756897

Genomic best linear unbiased prediction (gBLUP) for the estimation of genomic breeding values.

Samuel A Clark1, Julius van der Werf.   

Abstract

Genomic best linear unbiased prediction (gBLUP) is a method that utilizes genomic relationships to estimate the genetic merit of an individual. For this purpose, a genomic relationship matrix is used, estimated from DNA marker information. The matrix defines the covariance between individuals based on observed similarity at the genomic level, rather than on expected similarity based on pedigree, so that more accurate predictions of merit can be made. gBLUP has been used for the prediction of merit in livestock breeding, may also have some applications to the prediction of disease risk, and is also useful in the estimation of variance components and genomic heritabilities.

Mesh:

Year:  2013        PMID: 23756897     DOI: 10.1007/978-1-62703-447-0_13

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  11 in total

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2.  Effective genetic-risk prediction using mixed models.

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3.  Genome-wide association mapping of canopy wilting in diverse soybean genotypes.

Authors:  Avjinder S Kaler; Jeffery D Ray; William T Schapaugh; C Andy King; Larry C Purcell
Journal:  Theor Appl Genet       Date:  2017-07-20       Impact factor: 5.699

4.  Novel applications of multitask learning and multiple output regression to multiple genetic trait prediction.

Authors:  Dan He; David Kuhn; Laxmi Parida
Journal:  Bioinformatics       Date:  2016-06-15       Impact factor: 6.937

5.  Genetic Dissection of Snow Mold Tolerance in US Pacific Northwest Winter Wheat Through Genome-Wide Association Study and Genomic Selection.

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7.  Genomic heritability estimates in sweet cherry reveal non-additive genetic variance is relevant for industry-prioritized traits.

Authors:  Julia Piaskowski; Craig Hardner; Lichun Cai; Yunyang Zhao; Amy Iezzoni; Cameron Peace
Journal:  BMC Genet       Date:  2018-04-10       Impact factor: 2.797

8.  OCMA: Fast, Memory-Efficient Factorization of Prohibitively Large Relationship Matrices.

Authors:  Zhi Xiong; Qingrun Zhang; Alexander Platt; Wenyuan Liao; Xinghua Shi; Gustavo de Los Campos; Quan Long
Journal:  G3 (Bethesda)       Date:  2019-01-09       Impact factor: 3.154

9.  Sequencing depth and genotype quality: accuracy and breeding operation considerations for genomic selection applications in autopolyploid crops.

Authors:  Dorcus C Gemenet; Hannele Lindqvist-Kreuze; Bert De Boeck; Guilherme da Silva Pereira; Marcelo Mollinari; Zhao-Bang Zeng; G Craig Yencho; Hugo Campos
Journal:  Theor Appl Genet       Date:  2020-09-02       Impact factor: 5.699

10.  Association Analysis between Genetic Variants of elovl5a and elovl5b and Poly-Unsaturated Fatty Acids in Common Carp (Cyprinus carpio).

Authors:  Yan Zhang; Qing-Song Li; Yu-Qing Ye; Qi Wang; Xiao-Qing Sun; Ran Zhao; Jiong-Tang Li
Journal:  Biology (Basel)       Date:  2022-03-18
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