Literature DB >> 23754807

Energy, genes and evolution: introduction to an evolutionary synthesis.

Nick Lane1, William F Martin, John A Raven, John F Allen.   

Abstract

Life is the harnessing of chemical energy in such a way that the energy-harnessing device makes a copy of itself. No energy, no evolution. The 'modern synthesis' of the past century explained evolution in terms of genes, but this is only part of the story. While the mechanisms of natural selection are correct, and increasingly well understood, they do little to explain the actual trajectories taken by life on Earth. From a cosmic perspective-what is the probability of life elsewhere in the Universe, and what are its probable traits?-a gene-based view of evolution says almost nothing. Irresistible geological and environmental changes affected eukaryotes and prokaryotes in very different ways, ones that do not relate to specific genes or niches. Questions such as the early emergence of life, the morphological and genomic constraints on prokaryotes, the singular origin of eukaryotes, and the unique and perplexing traits shared by all eukaryotes but not found in any prokaryote, are instead illuminated by bioenergetics. If nothing in biology makes sense except in the light of evolution, nothing in evolution makes sense except in the light of energetics. This Special Issue of Philosophical Transactions examines the interplay between energy transduction and genome function in the major transitions of evolution, with implications ranging from planetary habitability to human health. We hope that these papers will contribute to a new evolutionary synthesis of energetics and genetics.

Entities:  

Keywords:  energy flow; genomes; mitochondria; origin of life

Mesh:

Year:  2013        PMID: 23754807      PMCID: PMC3685456          DOI: 10.1098/rstb.2012.0253

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  44 in total

1.  Selection for mitonuclear co-adaptation could favour the evolution of two sexes.

Authors:  Zena Hadjivasiliou; Andrew Pomiankowski; Robert M Seymour; Nick Lane
Journal:  Proc Biol Sci       Date:  2011-12-07       Impact factor: 5.349

2.  Evolutionary rewiring: a modified prokaryotic gene-regulatory pathway in chloroplasts.

Authors:  Sujith Puthiyaveetil; Iskander M Ibrahim; John F Allen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-06-10       Impact factor: 6.237

3.  The hydrogen hypothesis for the first eukaryote.

Authors:  W Martin; M Müller
Journal:  Nature       Date:  1998-03-05       Impact factor: 49.962

4.  The evolution of chemiosmotic energy coupling.

Authors:  J A Raven; F A Smith
Journal:  J Theor Biol       Date:  1976-04       Impact factor: 2.691

5.  Solute transport at the plasmalemmma and the early evolution of cells.

Authors:  J A Raven; F A Smith
Journal:  Biosystems       Date:  1982       Impact factor: 1.973

Review 6.  A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: a dawn for evolutionary medicine.

Authors:  Douglas C Wallace
Journal:  Annu Rev Genet       Date:  2005       Impact factor: 16.830

Review 7.  Interactions of photosynthesis with genome size and function.

Authors:  John A Raven; John Beardall; Anthony W D Larkum; Patricia Sánchez-Baracaldo
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-06-10       Impact factor: 6.237

8.  Crystal structure of the entire respiratory complex I.

Authors:  Rozbeh Baradaran; John M Berrisford; Gurdeep S Minhas; Leonid A Sazanov
Journal:  Nature       Date:  2013-02-17       Impact factor: 49.962

9.  Mitochondrial control of nuclear apoptosis.

Authors:  N Zamzami; S A Susin; P Marchetti; T Hirsch; I Gómez-Monterrey; M Castedo; G Kroemer
Journal:  J Exp Med       Date:  1996-04-01       Impact factor: 14.307

Review 10.  Early bioenergetic evolution.

Authors:  Filipa L Sousa; Thorsten Thiergart; Giddy Landan; Shijulal Nelson-Sathi; Inês A C Pereira; John F Allen; Nick Lane; William F Martin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-06-10       Impact factor: 6.237

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  12 in total

Review 1.  Why chloroplasts and mitochondria retain their own genomes and genetic systems: Colocation for redox regulation of gene expression.

Authors:  John F Allen
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-18       Impact factor: 11.205

2.  Microbial catabolic activities are naturally selected by metabolic energy harvest rate.

Authors:  Rebeca González-Cabaleiro; Irina D Ofiţeru; Juan M Lema; Jorge Rodríguez
Journal:  ISME J       Date:  2015-07-10       Impact factor: 10.302

Review 3.  The long goodbye: the rise and fall of flavodoxin during plant evolution.

Authors:  Juan J Pierella Karlusich; Anabella F Lodeyro; Néstor Carrillo
Journal:  J Exp Bot       Date:  2014-07-09       Impact factor: 6.992

4.  Linking the mitochondrial genotype to phenotype: a complex endeavour.

Authors:  Fabrizio Ghiselli; Liliana Milani
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-12-02       Impact factor: 6.237

5.  The transition between acute and chronic infections in light of energy control: a mathematical model of energy flow in response to infection.

Authors:  Gang Zhao; Rainer H Straub; Michael Meyer-Hermann
Journal:  J R Soc Interface       Date:  2022-06-22       Impact factor: 4.293

Review 6.  Horizontal transfer of short and degraded DNA has evolutionary implications for microbes and eukaryotic sexual reproduction.

Authors:  Søren Overballe-Petersen; Eske Willerslev
Journal:  Bioessays       Date:  2014-08-20       Impact factor: 4.345

7.  Alpha proteobacterial ancestry of the [Fe-Fe]-hydrogenases in anaerobic eukaryotes.

Authors:  Mauro Degli Esposti; Diego Cortez; Luis Lozano; Simon Rasmussen; Henrik Bjørn Nielsen; Esperanza Martinez Romero
Journal:  Biol Direct       Date:  2016-07-30       Impact factor: 4.540

Review 8.  Towards a Dynamic Interaction Network of Life to unify and expand the evolutionary theory.

Authors:  Eric Bapteste; Philippe Huneman
Journal:  BMC Biol       Date:  2018-05-29       Impact factor: 7.431

9.  Late Mitochondrial Acquisition, Really?

Authors:  Mauro Degli Esposti
Journal:  Genome Biol Evol       Date:  2016-07-03       Impact factor: 3.416

Review 10.  Ecological Energetic Perspectives on Responses of Nitrogen-Transforming Chemolithoautotrophic Microbiota to Changes in the Marine Environment.

Authors:  Hongyue Dang; Chen-Tung A Chen
Journal:  Front Microbiol       Date:  2017-07-14       Impact factor: 5.640

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