Literature DB >> 23754405

SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid.

Nam K Tonthat1, Sara L Milam, Nagababu Chinnam, Travis Whitfill, William Margolin, Maria A Schumacher.   

Abstract

The spatial and temporal control of Filamenting temperature sensitive mutant Z (FtsZ) Z-ring formation is crucial for proper cell division in bacteria. In Escherichia coli, the synthetic lethal with a defective Min system (SlmA) protein helps mediate nucleoid occlusion, which prevents chromosome fragmentation by binding FtsZ and inhibiting Z-ring formation over the nucleoid. However, to perform its function, SlmA must be bound to the nucleoid. To deduce the basis for this chromosomal requirement, we performed biochemical, cellular, and structural studies. Strikingly, structures show that SlmA dramatically distorts DNA, allowing it to bind as an orientated dimer-of-dimers. Biochemical data indicate that SlmA dimer-of-dimers can spread along the DNA. Combined structural and biochemical data suggest that this DNA-activated SlmA oligomerization would prevent FtsZ protofilament propagation and bundling. Bioinformatic analyses localize SlmA DNA sites near membrane-tethered chromosomal regions, and cellular studies show that SlmA inhibits FtsZ reservoirs from forming membrane-tethered Z rings. Thus, our combined data indicate that SlmA DNA helps block Z-ring formation over chromosomal DNA by forming higher-order protein-nucleic acid complexes that disable FtsZ filaments from coalescing into proper structures needed for Z-ring creation.

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Year:  2013        PMID: 23754405      PMCID: PMC3696773          DOI: 10.1073/pnas.1221036110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Rapid pole-to-pole oscillation of a protein required for directing division to the middle of Escherichia coli.

Authors:  D M Raskin; P A de Boer
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

2.  Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing.

Authors:  D I Svergun
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

3.  FtsZ exhibits rapid movement and oscillation waves in helix-like patterns in Escherichia coli.

Authors:  Swapna Thanedar; William Margolin
Journal:  Curr Biol       Date:  2004-07-13       Impact factor: 10.834

4.  Use of negative stain and single-particle image processing to explore dynamic properties of flexible macromolecules.

Authors:  Stan A Burgess; Matt L Walker; Kavitha Thirumurugan; John Trinick; Peter J Knight
Journal:  J Struct Biol       Date:  2004-09       Impact factor: 2.867

Review 5.  FtsZ and the division of prokaryotic cells and organelles.

Authors:  William Margolin
Journal:  Nat Rev Mol Cell Biol       Date:  2005-11       Impact factor: 94.444

Review 6.  The TetR family of transcriptional repressors.

Authors:  Juan L Ramos; Manuel Martínez-Bueno; Antonio J Molina-Henares; Wilson Terán; Kazuya Watanabe; Xiaodong Zhang; María Trinidad Gallegos; Richard Brennan; Raquel Tobes
Journal:  Microbiol Mol Biol Rev       Date:  2005-06       Impact factor: 11.056

7.  Global rigid body modeling of macromolecular complexes against small-angle scattering data.

Authors:  Maxim V Petoukhov; Dmitri I Svergun
Journal:  Biophys J       Date:  2005-05-27       Impact factor: 4.033

8.  FtsZ ring structure associated with division in Escherichia coli.

Authors:  E F Bi; J Lutkenhaus
Journal:  Nature       Date:  1991-11-14       Impact factor: 49.962

Review 9.  Assembly dynamics of the bacterial MinCDE system and spatial regulation of the Z ring.

Authors:  Joe Lutkenhaus
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

10.  SlmA, a nucleoid-associated, FtsZ binding protein required for blocking septal ring assembly over Chromosomes in E. coli.

Authors:  Thomas G Bernhardt; Piet A J de Boer
Journal:  Mol Cell       Date:  2005-05-27       Impact factor: 17.970

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  39 in total

Review 1.  The bacterial divisome: ready for its close-up.

Authors:  Veronica W Rowlett; William Margolin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-10-05       Impact factor: 6.237

2.  FtsZ Polymers Tethered to the Membrane by ZipA Are Susceptible to Spatial Regulation by Min Waves.

Authors:  Ariadna Martos; Ana Raso; Mercedes Jiménez; Zdeněk Petrášek; Germán Rivas; Petra Schwille
Journal:  Biophys J       Date:  2015-05-05       Impact factor: 4.033

3.  Asymmetric constriction of dividing Escherichia coli cells induced by expression of a fusion between two min proteins.

Authors:  Veronica Wells Rowlett; William Margolin
Journal:  J Bacteriol       Date:  2014-03-28       Impact factor: 3.490

4.  Structural and functional characterization of a ketosteroid transcriptional regulator of Mycobacterium tuberculosis.

Authors:  Adam M Crowe; Peter J Stogios; Israël Casabon; Elena Evdokimova; Alexei Savchenko; Lindsay D Eltis
Journal:  J Biol Chem       Date:  2014-11-18       Impact factor: 5.157

Review 5.  Regulation of cytokinesis: FtsZ and its accessory proteins.

Authors:  Mingzhi Wang; Chao Fang; Bo Ma; Xiaoxing Luo; Zheng Hou
Journal:  Curr Genet       Date:  2019-06-17       Impact factor: 3.886

6.  Bacterial FtsZ protein forms phase-separated condensates with its nucleoid-associated inhibitor SlmA.

Authors:  Begoña Monterroso; Silvia Zorrilla; Marta Sobrinos-Sanguino; Miguel A Robles-Ramos; Marina López-Álvarez; William Margolin; Christine D Keating; Germán Rivas
Journal:  EMBO Rep       Date:  2018-12-06       Impact factor: 8.807

7.  Crystallization and X-ray crystallographic analysis of recombinant TylP, a putative γ-butyrolactone receptor protein from Streptomyces fradiae.

Authors:  Nurhikmah Mohd-Sharif; Sofiyah Shaibullah; Vasanthakumar Givajothi; Cheng Seng Tan; Kok Lian Ho; Aik Hong Teh; Syarul Nataqain Baharum; Jitka Waterman; Chyan Leong Ng
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2017-01-31       Impact factor: 1.056

Review 8.  Guiding divisome assembly and controlling its activity.

Authors:  Mary-Jane Tsang; Thomas G Bernhardt
Journal:  Curr Opin Microbiol       Date:  2015-01-28       Impact factor: 7.934

Review 9.  Divided we stand: splitting synthetic cells for their proliferation.

Authors:  Yaron Caspi; Cees Dekker
Journal:  Syst Synth Biol       Date:  2014-05-27

10.  Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ.

Authors:  Maria A Schumacher; Wenjie Zeng
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-18       Impact factor: 11.205

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