Literature DB >> 23752738

Functional characterization of 32 CYP2C9 allelic variants.

Y Niinuma1, T Saito1, M Takahashi1, C Tsukada1, Mi Ito1, N Hirasawa1, M Hiratsuka1.   

Abstract

Genetic variations in cytochrome P450 2C9 (CYP2C9) contribute to interindividual variability in the metabolism of clinically used drugs such as warfarin and tolbutamide. We functionally characterized 32 types of allelic variant CYP2C9 proteins. Recombinant CYP2C9 proteins generated using a heterologous expression system are useful for comparing functional changes in CYP2C9 variant proteins expressed from low-frequency alleles. Wild-type CYP2C9 and its 31 variants were found to be transiently expressed in COS-7 cells, and the enzymatic activity of the CYP2C9 variants was characterized using S-warfarin as a representative substrate. Among the 32 types of CYP2C9 allelic variants tested, CYP2C9.18, CYP2C9.21, CYP2C9.24, CYP2C9.26, CYP2C9.33 and CYP2C9.35 exhibited no enzyme activity, and 12 types showed significantly decreased enzyme activity. In vitro analysis of CYP2C9 variant proteins should be useful for predicting CYP2C9 phenotypes and for application to personalized drug therapy.

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Year:  2013        PMID: 23752738     DOI: 10.1038/tpj.2013.22

Source DB:  PubMed          Journal:  Pharmacogenomics J        ISSN: 1470-269X            Impact factor:   3.550


  34 in total

1.  Warfarin dose requirements in a patient with the CYP2C9*14 allele.

Authors:  Yee Ming Lee; Jessica Eggen; Vinay Soni; Katarzyna Drozda; Edith A Nutescu; Larisa H Cavallari
Journal:  Pharmacogenomics       Date:  2014-05       Impact factor: 2.533

2.  The role of CYP2C9 genetic polymorphism in carvedilol O-desmethylation in vitro.

Authors:  Pei-Pei Pan; Qing-Hua Weng; Chen-Jian Zhou; Yan-Li Wei; Li Wang; Da-Peng Dai; Jian-Ping Cai; Guo-Xin Hu
Journal:  Eur J Drug Metab Pharmacokinet       Date:  2014-12-05       Impact factor: 2.441

3.  Pharmacogenomic Next-Generation DNA Sequencing: Lessons from the Identification and Functional Characterization of Variants of Unknown Significance in CYP2C9 and CYP2C19.

Authors:  Sandhya Devarajan; Irene Moon; Ming-Fen Ho; Nicholas B Larson; Drew R Neavin; Ann M Moyer; John L Black; Suzette J Bielinski; Steven E Scherer; Liewei Wang; Richard M Weinshilboum; Joel M Reid
Journal:  Drug Metab Dispos       Date:  2019-02-11       Impact factor: 3.922

Review 4.  Recommendations for Clinical CYP2C9 Genotyping Allele Selection: A Joint Recommendation of the Association for Molecular Pathology and College of American Pathologists.

Authors:  Victoria M Pratt; Larisa H Cavallari; Andria L Del Tredici; Houda Hachad; Yuan Ji; Ann M Moyer; Stuart A Scott; Michelle Whirl-Carrillo; Karen E Weck
Journal:  J Mol Diagn       Date:  2019-05-08       Impact factor: 5.568

5.  The presence of two reduced function variants in CYP2C9 influences the acute response to glipizide.

Authors:  L Chen; J H Li; V Kaur; A Muhammad; M Fernandez; M S Hudson; A B Goldfine; J C Florez
Journal:  Diabet Med       Date:  2019-11-25       Impact factor: 4.359

6.  Heterologous Expression and Functional Characterization of Novel CYP2C9 Variants Identified in the Alaska Native People.

Authors:  Matthew G McDonald; Lindsay M Henderson; Sutapa Ray; Catherine K Yeung; Amanda L Johnson; John P Kowalski; Helmut Hanenberg; Constanze Wiek; Kenneth E Thummel; Allan E Rettie
Journal:  J Pharmacol Exp Ther       Date:  2020-05-18       Impact factor: 4.030

7.  Comparison of study designs used to detect and characterize pharmacogenomic interactions in nonexperimental studies: a simulation study.

Authors:  Christy L Avery; Jane S Der; Eric A Whitsel; Til Stürmer
Journal:  Pharmacogenet Genomics       Date:  2014-03       Impact factor: 2.089

8.  Defining screening panel of functional variants of CYP1A1, CYP2C9, CYP2C19, CYP2D6, and CYP3A4 genes in Serbian population.

Authors:  Ivan Skadrić; Oliver Stojković
Journal:  Int J Legal Med       Date:  2019-12-20       Impact factor: 2.686

9.  Variation in genes controlling warfarin disposition and response in American Indian and Alaska Native people: CYP2C9, VKORC1, CYP4F2, CYP4F11, GGCX.

Authors:  Alison E Fohner; Renee Robinson; Joseph Yracheta; Denise A Dillard; Brian Schilling; Burhan Khan; Scarlett Hopkins; Bert Boyer; Jynene Black; Howard Wiener; Hemant K Tiwari; Adam Gordon; Deborah Nickerson; Jesse M Tsai; Federico M Farin; Timothy A Thornton; Allan E Rettie; Kenneth E Thummel
Journal:  Pharmacogenet Genomics       Date:  2015-07       Impact factor: 2.089

10.  Structure of Cytochrome P450 2C9*2 in Complex with Losartan: Insights into the Effect of Genetic Polymorphism.

Authors:  Sonia J Parikh; Chiara M Evans; Juliet O Obi; Qinghai Zhang; Keiko Maekawa; Karen C Glass; Manish B Shah
Journal:  Mol Pharmacol       Date:  2020-09-16       Impact factor: 4.436

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