Literature DB >> 23752312

Managing microRNAs with vector-encoded decoy-type inhibitors.

Rasmus O Bak1, Anne Kruse Hollensen, Jacob Giehm Mikkelsen.   

Abstract

A rapidly growing understanding of the complex circuitry of microRNA (miRNA)-mediated gene regulation is attracting attention to miRNAs as new drug targets. Targeted miRNA suppression is achieved in a sequence-specific manner by antisense RNA "decoy" molecules. Such synthetic miRNA inhibitors have reached the clinic with remarkable pace and may soon appear as new therapeutic modalities in several diseases. Shortcomings, however, include high production costs, the requirement for repeated administration, and difficulty achieving tissue-specific delivery. With the many recent landmark achievements in clinical gene therapy, new and refined vector-encoded miRNA suppression technologies are attractive for many applications, not least as tools in innumerable daily studies of miRNA biology in laboratories worldwide. Here, we provide an overview of the strategies that have been used to adapt vector-encoded inhibitors for miRNA suppression and discuss advantages related to spatiotemporal and long-term miRNA attenuation. With the remarkable new discovery of miRNA management by naturally occurring circular RNAs, RNA circles generated by trans-splicing mechanisms may prove to be well-suited carriers of decoy-type miRNA inhibitors. The community will aspire to combine circles with high-affinity miRNA decoy methodologies, and such "vectorized" RNA circles may represent new solid ways to deliver miRNA inhibitors, perhaps even with therapeutic applications.

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Year:  2013        PMID: 23752312      PMCID: PMC3734669          DOI: 10.1038/mt.2013.113

Source DB:  PubMed          Journal:  Mol Ther        ISSN: 1525-0016            Impact factor:   11.454


  50 in total

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Authors:  Margaret S Ebert; Joel R Neilson; Phillip A Sharp
Journal:  Nat Methods       Date:  2007-08-12       Impact factor: 28.547

3.  Target protectors reveal dampening and balancing of Nodal agonist and antagonist by miR-430.

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4.  Stable knockdown of microRNA in vivo by lentiviral vectors.

Authors:  Bernhard Gentner; Giulia Schira; Alice Giustacchini; Mario Amendola; Brian D Brown; Maurilio Ponzoni; Luigi Naldini
Journal:  Nat Methods       Date:  2008-11-30       Impact factor: 28.547

5.  Circular RNAs are a large class of animal RNAs with regulatory potency.

Authors:  Sebastian Memczak; Marvin Jens; Antigoni Elefsinioti; Francesca Torti; Janna Krueger; Agnieszka Rybak; Luisa Maier; Sebastian D Mackowiak; Lea H Gregersen; Mathias Munschauer; Alexander Loewer; Ulrike Ziebold; Markus Landthaler; Christine Kocks; Ferdinand le Noble; Nikolaus Rajewsky
Journal:  Nature       Date:  2013-02-27       Impact factor: 49.962

6.  Long-term, efficient inhibition of microRNA function in mice using rAAV vectors.

Authors:  Jun Xie; Stefan L Ameres; Randall Friedline; Jui-Hung Hung; Yu Zhang; Qing Xie; Li Zhong; Qin Su; Ran He; Mengxin Li; Huapeng Li; Xin Mu; Hongwei Zhang; Jennifer A Broderick; Jason K Kim; Zhiping Weng; Terence R Flotte; Phillip D Zamore; Guangping Gao
Journal:  Nat Methods       Date:  2012-03-04       Impact factor: 28.547

7.  The sufficient minimal set of miRNA seed types.

Authors:  Daniel C Ellwanger; Florian A Büttner; Hans-Werner Mewes; Volker Stümpflen
Journal:  Bioinformatics       Date:  2011-03-26       Impact factor: 6.937

8.  A resource of vectors and ES cells for targeted deletion of microRNAs in mice.

Authors:  Haydn M Prosser; Hiroko Koike-Yusa; James D Cooper; Frances C Law; Allan Bradley
Journal:  Nat Biotechnol       Date:  2011-08-07       Impact factor: 54.908

9.  A robust system for production of minicircle DNA vectors.

Authors:  Mark A Kay; Cheng-Yi He; Zhi-Ying Chen
Journal:  Nat Biotechnol       Date:  2010-11-21       Impact factor: 54.908

10.  Transgenic microRNA inhibition with spatiotemporal specificity in intact organisms.

Authors:  Carlos M Loya; Cecilia S Lu; David Van Vactor; Tudor A Fulga
Journal:  Nat Methods       Date:  2009-11-15       Impact factor: 28.547

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  28 in total

1.  Baculovirus-mediated miRNA regulation to suppress hepatocellular carcinoma tumorigenicity and metastasis.

Authors:  Chiu-Ling Chen; Jaw-Ching Wu; Guan-Yu Chen; Pei-Hsiang Yuan; Yen-Wen Tseng; Kuei-Chang Li; Shiaw-Min Hwang; Yu-Chen Hu
Journal:  Mol Ther       Date:  2014-07-15       Impact factor: 11.454

2.  Pigmy MicroRNA: surveillance cops in Therapies kingdom.

Authors:  Utpal Bhadra; Pradipta Patra; Jagamohan Chhatai; Manika Pal-Bhadra
Journal:  Mol Med       Date:  2016-09-28       Impact factor: 6.354

Review 3.  Circular RNAs in cancer: novel insights into origins, properties, functions and implications.

Authors:  Jingqiu Li; Jie Yang; Ping Zhou; Yanping Le; Chengwei Zhou; Shaomin Wang; Dazhi Xu; Hui-Kuan Lin; Zhaohui Gong
Journal:  Am J Cancer Res       Date:  2015-01-15       Impact factor: 6.166

Review 4.  Recombinant AAV as a platform for translating the therapeutic potential of RNA interference.

Authors:  Florie Borel; Mark A Kay; Christian Mueller
Journal:  Mol Ther       Date:  2013-12-19       Impact factor: 11.454

Review 5.  Non-coding RNA networks in cancer.

Authors:  Eleni Anastasiadou; Leni S Jacob; Frank J Slack
Journal:  Nat Rev Cancer       Date:  2017-11-24       Impact factor: 60.716

6.  CircFADS2: A potential prognostic biomarker of colorectal cancer.

Authors:  Yi-Sheng Xiao; Hua-Zhang Tong; Xi-Hong Yuan; Chang-Hui Xiong; Xiao-Yang Xu; Yuan-Feng Zeng
Journal:  Exp Biol Med (Maywood)       Date:  2020-06-02

Review 7.  Targeting oncomiRNAs and mimicking tumor suppressor miRNAs: Νew trends in the development of miRNA therapeutic strategies in oncology (Review).

Authors:  Roberto Gambari; Eleonora Brognara; Demetrios A Spandidos; Enrica Fabbri
Journal:  Int J Oncol       Date:  2016-05-04       Impact factor: 5.650

8.  Blocking sense-strand activity improves potency, safety and specificity of anti-hepatitis B virus short hairpin RNA.

Authors:  Thomas Michler; Stefanie Große; Stefan Mockenhaupt; Natalie Röder; Ferdinand Stückler; Bettina Knapp; Chunkyu Ko; Mathias Heikenwalder; Ulrike Protzer; Dirk Grimm
Journal:  EMBO Mol Med       Date:  2016-09-01       Impact factor: 12.137

9.  Methods to Investigate miRNA Function: Focus on Platelet Reactivity.

Authors:  Alix Garcia; Sylvie Dunoyer-Geindre; Richard J Fish; Marguerite Neerman-Arbez; Jean-Luc Reny; Pierre Fontana
Journal:  Thromb Haemost       Date:  2020-10-29       Impact factor: 5.249

Review 10.  Coupling and coordination in gene expression processes with pre-mRNA splicing.

Authors:  Kewu Pan; Jimmy Tsz Hang Lee; Zhe Huang; Chi-Ming Wong
Journal:  Int J Mol Sci       Date:  2015-03-11       Impact factor: 5.923

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