Literature DB >> 23751305

Identification and expression analysis of a new glycoside hydrolase family 55 exo-β-1,3-glucanase-encoding gene in Volvariella volvacea suggests a role in fruiting body development.

Yongxin Tao1, Baogui Xie, Zhiyun Yang, Zhihong Chen, Bingzhi Chen, Youjin Deng, Yuji Jiang, Arend F van Peer.   

Abstract

The edible straw mushroom Volvariella volvacea is an important crop in South East Asia and is predominantly harvested in the egg stage. Rapid stipe elongation and cap expansion result in a swift transition from the egg to elongation and maturation stage, which are subjected to fast senescence and deterioration. In other mushrooms, β-1,3-glucanases have been associated with degradation (softening) of the cell wall during stipe elongation and senescence. We present a new glycoside hydrolase family 55 (GH55) exo-β-1,3-glucanase gene, exg2, and highly conserved deduced EXG2 protein. The 3D model and presumed catalytic residues of V. volvacea EXG2 are identical to Lentinula edodes EXG2 and Phanerochaete chrysosporium Lam55A, supporting similar enzymatic functions. In addition to previous association to stipe elongation and senescence, our data clearly indicates a role for cap (pileus) expansion. Digital gene expression, quantitative PCR and isobaric tags for relative and absolute quantification analysis showed low exg2 and EXG2 levels in primordia, button, egg and elongation stages and significantly increased levels in the maturation stage. Subsequent relative quantitative PCR analysis designated expression of exg2 to the stipe in the elongation stage and to the pileus and stipe in the maturation stage. EXG2 cell wall softening activity, close correlation of exg2 expression with the principal expanding mushroom tissues and a strong conservation of expression patterns and protein sequences in other mushrooms, make V. volvacea exg2 an important candidate for future studies on mechanisms of fruiting body expansion and senescence causing commodity value loss.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  AA; BU; CDS; CTAB; DGE; DNA complementary to RNA; EG; EL; Edible fungi; Expression profile; GH 55 gene; GH55; Gene identification; Hexadecyl trimethyl ammonium Bromide; MA; ORF; PR; Pileus expansion; Q-PCR; Stipe elongation; TPM; amino acid; button stage; cDNA; digital gene expression; egg stage; elongation stage; glycoside hydrolase family 55; iTRAQ; isobaric tags for relative and absolute quantification; maturation stage; open reading frame; primordia; real time quantitative PCR; sequence coding for amino acids in protein; transcripts per million clean tags

Mesh:

Substances:

Year:  2013        PMID: 23751305     DOI: 10.1016/j.gene.2013.05.071

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  12 in total

1.  Chitinases Play a Key Role in Stipe Cell Wall Extension in the Mushroom Coprinopsis cinerea.

Authors:  Jiangsheng Zhou; Liqin Kang; Cuicui Liu; Xin Niu; Xiaojun Wang; Hailong Liu; Wenming Zhang; Zhonghua Liu; Jean-Paul Latgé; Sheng Yuan
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

Review 2.  Evolutionary Morphogenesis of Sexual Fruiting Bodies in Basidiomycota: Toward a New Evo-Devo Synthesis.

Authors:  Máté Virágh; Zsolt Merényi; Árpád Csernetics; Csenge Földi; Neha Sahu; Xiao-Bin Liu; David S Hibbett; László G Nagy
Journal:  Microbiol Mol Biol Rev       Date:  2021-11-24       Impact factor: 13.044

3.  The Accordant Trend of Both Parameters (rgs Expression and cAMP Content) Follows the Pattern of Development of Fruiting Body in Volvariella volvacea.

Authors:  Yuanping Lu; Lingdan Lian; Lixian Guo; Bin Xie; Wei Wang; Bingzhi Chen; Arend Frans van Peer; Shaojie Li; Taju Wu; Baogui Xie
Journal:  Curr Microbiol       Date:  2015-08-12       Impact factor: 2.188

4.  Gene expression profiling reveals large regulatory switches between succeeding stipe stages in Volvariella volvacea.

Authors:  Yongxin Tao; Arend F van Peer; Bingzhi Chen; Zhihong Chen; Jian Zhu; Youjin Deng; Yuji Jiang; Shaojie Li; Taju Wu; Baogui Xie
Journal:  PLoS One       Date:  2014-05-27       Impact factor: 3.240

5.  The Sequence Characteristics and Expression Models Reveal Superoxide Dismutase Involved in Cold Response and Fruiting Body Development in Volvariella volvacea.

Authors:  Jun-Jie Yan; Lei Zhang; Rui-Qing Wang; Bin Xie; Xiao Li; Ren-Liang Chen; Li-Xian Guo; Bao-Gui Xie
Journal:  Int J Mol Sci       Date:  2016-01-14       Impact factor: 5.923

6.  Identification of novel and robust internal control genes from Volvariella volvacea that are suitable for RT-qPCR in filamentous fungi.

Authors:  Yongxin Tao; Arend Frans van Peer; Qianhui Huang; Yanping Shao; Lei Zhang; Bin Xie; Yuji Jiang; Jian Zhu; Baogui Xie
Journal:  Sci Rep       Date:  2016-07-12       Impact factor: 4.379

7.  Isolation and Characterization of ScGluD2, a New Sugarcane beta-1,3-Glucanase D Family Gene Induced by Sporisorium scitamineum, ABA, H2O2, NaCl, and CdCl2 Stresses.

Authors:  Yachun Su; Zhuqing Wang; Feng Liu; Zhu Li; Qiong Peng; Jinlong Guo; Liping Xu; Youxiong Que
Journal:  Front Plant Sci       Date:  2016-09-02       Impact factor: 5.753

8.  Diversity of nitrogen-fixing rhizobacteria associated with sugarcane: a comprehensive study of plant-microbe interactions for growth enhancement in Saccharum spp.

Authors:  Rajesh Kumar Singh; Pratiksha Singh; Hai-Bi Li; Qi-Qi Song; Dao-Jun Guo; Manoj K Solanki; Krishan K Verma; Mukesh K Malviya; Xiu-Peng Song; Prakash Lakshmanan; Li-Tao Yang; Yang-Rui Li
Journal:  BMC Plant Biol       Date:  2020-05-18       Impact factor: 4.215

9.  Identification and Characterization of Two New S-Adenosylmethionine-Dependent Methyltransferase Encoding Genes Suggested Their Involvement in Stipe Elongation of Flammulina velutipes.

Authors:  Qianhui Huang; Irum Mukhtar; Yelin Zhang; Zhongyang Wei; Xing Han; Rongmei Huang; Junjie Yan; Baogui Xie
Journal:  Mycobiology       Date:  2019-09-13       Impact factor: 1.858

10.  Cloning and Expression Analysis of Vvlcc3, a Novel and Functional Laccase Gene Possibly Involved in Stipe Elongation.

Authors:  Yuanping Lu; Guangmei Wu; Lingdan Lian; Lixian Guo; Wei Wang; Zhiyun Yang; Juan Miao; Bingzhi Chen; Baogui Xie
Journal:  Int J Mol Sci       Date:  2015-12-01       Impact factor: 5.923

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.