Literature DB >> 23750508

Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the α/β hydrolase family.

María Alcaide1, Jesús Tornés, Peter J Stogios, Xiaohui Xu, Christoph Gertler, Rosa Di Leo, Rafael Bargiela, Alvaro Lafraya, María-Eugenia Guazzaroni, Nieves López-Cortés, Tatyana N Chernikova, Olga V Golyshina, Taras Y Nechitaylo, Iris Plumeier, Dietmar H Pieper, Michail M Yakimov, Alexei Savchenko, Peter N Golyshin, Manuel Ferrer.   

Abstract

Several members of the C-C MCP (meta-cleavage product) hydrolase family demonstrate an unusual ability to hydrolyse esters as well as the MCPs (including those from mono- and bi-cyclic aromatics). Although the molecular mechanisms responsible for such substrate promiscuity are starting to emerge, the full understanding of these complex enzymes is far from complete. In the present paper, we describe six distinct α/β hydrolases identified through genomic approaches, four of which demonstrate the unprecedented characteristic of activity towards a broad spectrum of substrates, including p-nitrophenyl, halogenated, fatty acyl, aryl, glycerol, cinnamoyl and carbohydrate esters, lactones, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate and 2-hydroxy-6-oxohepta-2,4-dienoate. Using structural analysis and site-directed mutagenesis we have identified the three residues (Ser32, Val130 and Trp144) that determine the unusual substrate specificity of one of these proteins, CCSP0084. The results may open up new research avenues into comparative catalytic models, structural and mechanistic studies, and biotechnological applications of MCP hydrolases.

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Year:  2013        PMID: 23750508     DOI: 10.1042/BJ20130552

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  10 in total

1.  How the Same Core Catalytic Machinery Catalyzes 17 Different Reactions: the Serine-Histidine-Aspartate Catalytic Triad of α/β-Hydrolase Fold Enzymes.

Authors:  Alissa Rauwerdink; Romas J Kazlauskas
Journal:  ACS Catal       Date:  2015-09-09       Impact factor: 13.084

2.  Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp Rimicaris exoculata by using functional metagenomics.

Authors:  María Alcaide; Anatoli Tchigvintsev; Mónica Martínez-Martínez; Ana Popovic; Oleg N Reva; Álvaro Lafraya; Rafael Bargiela; Taras Y Nechitaylo; Ruth Matesanz; Marie-Anne Cambon-Bonavita; Mohamed Jebbar; Michail M Yakimov; Alexei Savchenko; Olga V Golyshina; Alexander F Yakunin; Peter N Golyshin; Manuel Ferrer
Journal:  Appl Environ Microbiol       Date:  2015-01-16       Impact factor: 4.792

3.  Insights into the degradation capacities of Amycolatopsis tucumanensis DSM 45259 guided by microarray data.

Authors:  Natalia Bourguignon; Rafael Bargiela; David Rojo; Tatyana N Chernikova; Sara A López de Rodas; Jesús García-Cantalejo; Daniela J Näther; Peter N Golyshin; Coral Barbas; Marcela Ferrero; Manuel Ferrer
Journal:  World J Microbiol Biotechnol       Date:  2016-10-26       Impact factor: 3.312

4.  Differential Roles of Three Different Upper Pathway meta Ring Cleavage Product Hydrolases in the Degradation of Dibenzo-p-Dioxin and Dibenzofuran by Sphingomonas wittichii Strain RW1.

Authors:  Thamer Y Mutter; Gerben J Zylstra
Journal:  Appl Environ Microbiol       Date:  2021-09-01       Impact factor: 4.792

Review 5.  Synthetic biology approaches to improve biocatalyst identification in metagenomic library screening.

Authors:  María-Eugenia Guazzaroni; Rafael Silva-Rocha; Richard John Ward
Journal:  Microb Biotechnol       Date:  2014-08-13       Impact factor: 5.813

6.  Biochemical studies on a versatile esterase that is most catalytically active with polyaromatic esters.

Authors:  Mónica Martínez-Martínez; Iván Lores; Carlina Peña-García; Rafael Bargiela; Dolores Reyes-Duarte; María-Eugenia Guazzaroni; Ana Isabel Peláez; Jesús Sánchez; Manuel Ferrer
Journal:  Microb Biotechnol       Date:  2014-01-13       Impact factor: 5.813

Review 7.  Estimating the success of enzyme bioprospecting through metagenomics: current status and future trends.

Authors:  Manuel Ferrer; Mónica Martínez-Martínez; Rafael Bargiela; Wolfgang R Streit; Olga V Golyshina; Peter N Golyshin
Journal:  Microb Biotechnol       Date:  2015-08-14       Impact factor: 5.813

8.  Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families.

Authors:  Ana Popovic; Tran Hai; Anatoly Tchigvintsev; Mahbod Hajighasemi; Boguslaw Nocek; Anna N Khusnutdinova; Greg Brown; Julia Glinos; Robert Flick; Tatiana Skarina; Tatyana N Chernikova; Veronica Yim; Thomas Brüls; Denis Le Paslier; Michail M Yakimov; Andrzej Joachimiak; Manuel Ferrer; Olga V Golyshina; Alexei Savchenko; Peter N Golyshin; Alexander F Yakunin
Journal:  Sci Rep       Date:  2017-03-08       Impact factor: 4.379

9.  Structural and Functional Characterization of a Ruminal β-Glycosidase Defines a Novel Subfamily of Glycoside Hydrolase Family 3 with Permuted Domain Topology.

Authors:  Mercedes Ramírez-Escudero; Mercedes V Del Pozo; Julia Marín-Navarro; Beatriz González; Peter N Golyshin; Julio Polaina; Manuel Ferrer; Julia Sanz-Aparicio
Journal:  J Biol Chem       Date:  2016-09-27       Impact factor: 5.157

10.  The acid-base-nucleophile catalytic triad in ABH-fold enzymes is coordinated by a set of structural elements.

Authors:  Alexander Denesyuk; Polytimi S Dimitriou; Mark S Johnson; Toru Nakayama; Konstantin Denessiouk
Journal:  PLoS One       Date:  2020-02-21       Impact factor: 3.240

  10 in total

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