Literature DB >> 23749213

A new player in Pol II pausing.

Nicholas J Fuda1, John T Lis.   

Abstract

Transcriptional control plays a primary role in gene expression and can be exerted at multiple levels of the transcription process, such as RNA polymerase recruitment and promoter-proximal pausing. A recent report published in The EMBO Journal (Li and Gilmour, 2013) provides new insights into the regulation of a large class of paused genes through the identification of a novel transcription factor (TF; Motif 1 binding protein, M1BP) that binds to promoters of paused genes and controls their expression.

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Year:  2013        PMID: 23749213      PMCID: PMC3981171          DOI: 10.1038/emboj.2013.138

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  11 in total

1.  Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation.

Authors:  Daniel A Gilchrist; Gilberto Dos Santos; David C Fargo; Bin Xie; Yuan Gao; Leping Li; Karen Adelman
Journal:  Cell       Date:  2010-11-12       Impact factor: 41.582

Review 2.  Controlling the elongation phase of transcription with P-TEFb.

Authors:  B Matija Peterlin; David H Price
Journal:  Mol Cell       Date:  2006-08-04       Impact factor: 17.970

3.  Precise maps of RNA polymerase reveal how promoters direct initiation and pausing.

Authors:  Hojoong Kwak; Nicholas J Fuda; Leighton J Core; John T Lis
Journal:  Science       Date:  2013-02-22       Impact factor: 47.728

Review 4.  Pol II waiting in the starting gates: Regulating the transition from transcription initiation into productive elongation.

Authors:  Sergei Nechaev; Karen Adelman
Journal:  Biochim Biophys Acta       Date:  2010-11-13

5.  Computational analysis of core promoters in the Drosophila genome.

Authors:  Uwe Ohler; Guo-chun Liao; Heinrich Niemann; Gerald M Rubin
Journal:  Genome Biol       Date:  2002-12-20       Impact factor: 13.583

6.  Defining the status of RNA polymerase at promoters.

Authors:  Leighton J Core; Joshua J Waterfall; Daniel A Gilchrist; David C Fargo; Hojoong Kwak; Karen Adelman; John T Lis
Journal:  Cell Rep       Date:  2012-10-10       Impact factor: 9.423

7.  Distinct mechanisms of transcriptional pausing orchestrated by GAGA factor and M1BP, a novel transcription factor.

Authors:  Jian Li; David S Gilmour
Journal:  EMBO J       Date:  2013-05-24       Impact factor: 11.598

Review 8.  Transcription elongation factors DSIF and NELF: promoter-proximal pausing and beyond.

Authors:  Yuki Yamaguchi; Hirotaka Shibata; Hiroshi Handa
Journal:  Biochim Biophys Acta       Date:  2012-11-29

9.  NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila.

Authors:  Chanhyo Lee; Xiaoyong Li; Aaron Hechmer; Michael Eisen; Mark D Biggin; Bryan J Venters; Cizhong Jiang; Jian Li; B Franklin Pugh; David S Gilmour
Journal:  Mol Cell Biol       Date:  2008-03-10       Impact factor: 4.272

10.  Promoter elements associated with RNA Pol II stalling in the Drosophila embryo.

Authors:  David A Hendrix; Joung-Woo Hong; Julia Zeitlinger; Daniel S Rokhsar; Michael S Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-27       Impact factor: 11.205

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  1 in total

1.  The natural chemopreventive agent sulforaphane inhibits STAT5 activity.

Authors:  Sophia Pinz; Samy Unser; Anne Rascle
Journal:  PLoS One       Date:  2014-06-09       Impact factor: 3.240

  1 in total

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