Literature DB >> 23748216

Eubacterial rhodopsins - unique photosensors and diverse ion pumps.

Leonid S Brown1.   

Abstract

Since the discovery of proteorhodopsins, the ubiquitous marine light-driven proton pumps of eubacteria, a large number of other eubacterial rhodopsins with diverse structures and functions have been characterized. Here, we review the body of knowledge accumulated on the four major groups of eubacterial rhodopsins, with the focus on their biophysical characterization. We discuss advances and controversies on the unique eubacterial sensory rhodopsins (as represented by Anabaena sensory rhodopsin), proton-pumping proteorhodopsins and xanthorhodopsins, as well as novel non-proton ion pumps. This article is part of a Special Issue entitled: Retinal Proteins - You can teach an old dog new tricks.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Biospectroscopy; Eubacterial rhodopsins; Photosensory transduction; Proton pumping; Retinal-binding proteins

Mesh:

Substances:

Year:  2013        PMID: 23748216     DOI: 10.1016/j.bbabio.2013.05.006

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  23 in total

1.  History and Perspectives of Ion-Transporting Rhodopsins.

Authors:  Hideki Kandori
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

2.  Spectroscopic study of the transmembrane domain of a rhodopsin-phosphodiesterase fusion protein from a unicellular eukaryote.

Authors:  Masahito Watari; Tatsuya Ikuta; Daichi Yamada; Wataru Shihoya; Kazuho Yoshida; Satoshi P Tsunoda; Osamu Nureki; Hideki Kandori
Journal:  J Biol Chem       Date:  2019-01-08       Impact factor: 5.157

3.  Cation-Specific Conformations in a Dual-Function Ion-Pumping Microbial Rhodopsin.

Authors:  Giordano F Z da Silva; Brandon R Goblirsch; Ah-Lim Tsai; John L Spudich
Journal:  Biochemistry       Date:  2015-06-17       Impact factor: 3.162

4.  Biochemical Analysis of Microbial Rhodopsins.

Authors:  Julia A Maresca; Jessica L Keffer; Kelsey J Miller
Journal:  Curr Protoc Microbiol       Date:  2016-05-06

Review 5.  Marine Bacterial and Archaeal Ion-Pumping Rhodopsins: Genetic Diversity, Physiology, and Ecology.

Authors:  Jarone Pinhassi; Edward F DeLong; Oded Béjà; José M González; Carlos Pedrós-Alió
Journal:  Microbiol Mol Biol Rev       Date:  2016-09-14       Impact factor: 11.056

6.  Structure of an Inward Proton-Transporting Anabaena Sensory Rhodopsin Mutant: Mechanistic Insights.

Authors:  Bamboo Dong; Lissete Sánchez-Magraner; Hartmut Luecke
Journal:  Biophys J       Date:  2016-09-06       Impact factor: 4.033

7.  A unique choanoflagellate enzyme rhodopsin exhibits light-dependent cyclic nucleotide phosphodiesterase activity.

Authors:  Kazuho Yoshida; Satoshi P Tsunoda; Leonid S Brown; Hideki Kandori
Journal:  J Biol Chem       Date:  2017-03-16       Impact factor: 5.157

Review 8.  Microbial Rhodopsins: Diversity, Mechanisms, and Optogenetic Applications.

Authors:  Elena G Govorunova; Oleg A Sineshchekov; Hai Li; John L Spudich
Journal:  Annu Rev Biochem       Date:  2017-03-09       Impact factor: 23.643

9.  Using total internal reflection fluorescence microscopy to visualize rhodopsin-containing cells.

Authors:  J L Keffer; C R Sabanayagam; M E Lee; E F DeLong; M W Hahn; J A Maresca
Journal:  Appl Environ Microbiol       Date:  2015-03-13       Impact factor: 4.792

10.  Characterization of an Unconventional Rhodopsin from the Freshwater Actinobacterium Rhodoluna lacicola.

Authors:  J L Keffer; M W Hahn; J A Maresca
Journal:  J Bacteriol       Date:  2015-06-08       Impact factor: 3.490

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