Literature DB >> 23747193

Diversity training for signal transduction: leveraging cell-to-cell variability to dissect cellular signaling, differentiation and death.

Jesse W Cotari1, Guillaume Voisinne, Grégoire Altan-Bonnet.   

Abstract

Populations of 'identical' cells are rarely truly identical. Even when in the same state of differentiation, isogenic cells may vary in expression of key signaling regulators, activate signal transduction at different thresholds, and consequently respond heterogeneously to a given stimulus. Here, we review how new experimental and analytical techniques are suited to connect these different levels of variability, quantitatively mapping the effects of cell-to-cell variability on cellular decision-making. In particular, we summarize how this helps classify signaling regulators according to the impact of their variability on biological functions. We further discuss how variability can also be leveraged to shed light on the molecular mechanisms regulating cellular signaling, from the individual cell to the population of cells as a whole.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23747193      PMCID: PMC3863640          DOI: 10.1016/j.copbio.2013.05.002

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  38 in total

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3.  Coordinate analysis of murine immune cell surface markers and intracellular phosphoproteins by flow cytometry.

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4.  Characterization of the murine immunological signaling network with phosphospecific flow cytometry.

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5.  Dissecting T cell contraction in vivo using a genetically encoded reporter of apoptosis.

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6.  Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum.

Authors:  Sean C Bendall; Erin F Simonds; Peng Qiu; El-ad D Amir; Peter O Krutzik; Rachel Finck; Robert V Bruggner; Rachel Melamed; Angelica Trejo; Olga I Ornatsky; Robert S Balderas; Sylvia K Plevritis; Karen Sachs; Dana Pe'er; Scott D Tanner; Garry P Nolan
Journal:  Science       Date:  2011-05-06       Impact factor: 47.728

7.  Cell-to-cell variability analysis dissects the plasticity of signaling of common γ chain cytokines in T cells.

Authors:  Jesse W Cotari; Guillaume Voisinne; Orly Even Dar; Volkan Karabacak; Grégoire Altan-Bonnet
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8.  Single cell profiling of potentiated phospho-protein networks in cancer cells.

Authors:  Jonathan M Irish; Randi Hovland; Peter O Krutzik; Omar D Perez; Øystein Bruserud; Bjørn T Gjertsen; Garry P Nolan
Journal:  Cell       Date:  2004-07-23       Impact factor: 41.582

Review 9.  Measurement and modeling of signaling at the single-cell level.

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Journal:  Biochemistry       Date:  2012-09-14       Impact factor: 3.162

10.  Bet hedging in yeast by heterogeneous, age-correlated expression of a stress protectant.

Authors:  Sasha F Levy; Naomi Ziv; Mark L Siegal
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  6 in total

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3.  Multidimensional single-cell analysis of BCR signaling reveals proximal activation defect as a hallmark of chronic lymphocytic leukemia B cells.

Authors:  M Lia Palomba; Kelly Piersanti; Carly G K Ziegler; Hugo Decker; Jesse W Cotari; Kurt Bantilan; Ivelise Rijo; Jeff R Gardner; Mark Heaney; Debra Bemis; Robert Balderas; Sami N Malek; Erlene Seymour; Andrew D Zelenetz; Marcel R M van den Brink; Grégoire Altan-Bonnet
Journal:  PLoS One       Date:  2014-01-29       Impact factor: 3.240

4.  Novel robust biomarkers for human bladder cancer based on activation of intracellular signaling pathways.

Authors:  Ksenia Lezhnina; Olga Kovalchuk; Alexander A Zhavoronkov; Mikhail B Korzinkin; Anastasia A Zabolotneva; Peter V Shegay; Dmitry G Sokov; Nurshat M Gaifullin; Igor G Rusakov; Alexander M Aliper; Sergey A Roumiantsev; Boris Y Alekseev; Nikolay M Borisov; Anton A Buzdin
Journal:  Oncotarget       Date:  2014-10-15

5.  Constitutive Activation of the B Cell Receptor Underlies Dysfunctional Signaling in Chronic Lymphocytic Leukemia.

Authors:  Carly G K Ziegler; Joel Kim; Kelly Piersanti; Alon Oyler-Yaniv; Kimon V Argyropoulos; Marcel R M van den Brink; M Lia Palomba; Nihal Altan-Bonnet; Grégoire Altan-Bonnet
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6.  Dichotomy of cellular inhibition by small-molecule inhibitors revealed by single-cell analysis.

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  6 in total

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