Literature DB >> 23738844

Sum-frequency-generation vibration spectroscopy and density functional theory calculations with dispersion corrections (DFT-D2) for cellulose Iα and Iβ.

Christopher M Lee1, Naseer M A Mohamed, Heath D Watts, James D Kubicki, Seong H Kim.   

Abstract

Sum-frequency-generation (SFG) vibration spectroscopy selectively detects noncentrosymmetric vibrational modes in crystalline cellulose inside intact lignocellulose. However, SFG peak assignment in biomass samples is challenging due to the complexity of the SFG processes and the lack of reference SFG spectra from the two crystal forms synthesized in nature, cellulose Iα and Iβ. This paper compares SFG spectra of laterally aligned cellulose Iα and Iβ crystals with vibration frequencies calculated from density functional theory with dispersion corrections (DFT-D2). Two possible hydrogen-bond networks A and B ( Nishiyama et al. Biomacromolecules 2008 , 9 , 3133 ) were investigated for both polymorphs. From DFT-D2 calculations the energetically favorable structures for cellulose Iα and Iβ had CH2OH groups in tg conformations and network A hydrogen bonding. The calculated frequencies of C-H stretch modes agreed reasonably well with the peak positions observed with SFG and were localized vibrations; thus, peak assignments to specific alkyl groups were proposed. DFT-D2 calculations underestimated the distances between hydrogen-bonded oxygen atoms compared to the experimentally determined values; therefore, the OH stretching calculated frequencies were ~100 cm(-1) lower than observed. The SFG peak assignments through comparison with DFT-D2 calculations will guide the SFG analysis of the crystalline cellulose structure in plant cell walls and lignocellulose biomass.

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Year:  2013        PMID: 23738844     DOI: 10.1021/jp402998s

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  6 in total

1.  Monitoring meso-scale ordering of cellulose in intact plant cell walls using sum frequency generation spectroscopy.

Authors:  Yong Bum Park; Christopher M Lee; Bon-Wook Koo; Sunkyu Park; Daniel J Cosgrove; Seong H Kim
Journal:  Plant Physiol       Date:  2013-08-30       Impact factor: 8.340

2.  Hyperspectral imaging with laser-scanning sum-frequency generation microscopy.

Authors:  Adam Hanninen; Ming Wai Shu; Eric O Potma
Journal:  Biomed Opt Express       Date:  2017-08-29       Impact factor: 3.732

3.  Progressive structural changes of Avicel, bleached softwood, and bacterial cellulose during enzymatic hydrolysis.

Authors:  Kabindra Kafle; Heenae Shin; Christopher M Lee; Sunkyu Park; Seong H Kim
Journal:  Sci Rep       Date:  2015-10-14       Impact factor: 4.379

4.  How cellulose stretches: synergism between covalent and hydrogen bonding.

Authors:  Clemens M Altaner; Lynne H Thomas; Anwesha N Fernandes; Michael C Jarvis
Journal:  Biomacromolecules       Date:  2014-02-26       Impact factor: 6.988

5.  Modification of the nanostructure of lignocellulose cell walls via a non-enzymatic lignocellulose deconstruction system in brown rot wood-decay fungi.

Authors:  Barry Goodell; Yuan Zhu; Seong Kim; Kabindra Kafle; Daniel Eastwood; Geoffrey Daniel; Jody Jellison; Makoto Yoshida; Leslie Groom; Sai Venkatesh Pingali; Hugh O'Neill
Journal:  Biotechnol Biofuels       Date:  2017-07-11       Impact factor: 6.040

6.  Theoretical Sum Frequency Generation Spectroscopy of Peptides.

Authors:  Joshua K Carr; Lu Wang; Santanu Roy; James L Skinner
Journal:  J Phys Chem B       Date:  2014-09-24       Impact factor: 2.991

  6 in total

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