Literature DB >> 23731809

Applying various algorithms for species distribution modelling.

Xinhai Li1, Yuan Wang.   

Abstract

Species distribution models have been used extensively in many fields, including climate change biology, landscape ecology and conservation biology. In the past 3 decades, a number of new models have been proposed, yet researchers still find it difficult to select appropriate models for data and objectives. In this review, we aim to provide insight into the prevailing species distribution models for newcomers in the field of modelling. We compared 11 popular models, including regression models (the generalized linear model, the generalized additive model, the multivariate adaptive regression splines model and hierarchical modelling), classification models (mixture discriminant analysis, the generalized boosting model, and classification and regression tree analysis) and complex models (artificial neural network, random forest, genetic algorithm for rule set production and maximum entropy approaches). Our objectives are: (i) to compare the strengths and weaknesses of the models, their characteristics and identify suitable situations for their use (in terms of data type and species-environment relationships) and (ii) to provide guidelines for model application, including 3 steps: model selection, model formulation and parameter estimation.
© 2012 Wiley Publishing Asia Pty Ltd, ISZS and IOZ/CAS.

Mesh:

Year:  2013        PMID: 23731809     DOI: 10.1111/1749-4877.12000

Source DB:  PubMed          Journal:  Integr Zool        ISSN: 1749-4869            Impact factor:   2.654


  21 in total

1.  Idiosyncratic responses to drivers of genetic differentiation in the complex landscapes of Isthmian Central America.

Authors:  Adrián García-Rodríguez; Carlos E Guarnizo; Andrew J Crawford; Adrian A Garda; Gabriel C Costa
Journal:  Heredity (Edinb)       Date:  2020-10-13       Impact factor: 3.821

2.  A multiscale approach indicates a severe reduction in Atlantic Forest wetlands and highlights that São Paulo Marsh Antwren is on the brink of extinction.

Authors:  Glaucia Del-Rio; Marco Antonio Rêgo; Luís Fábio Silveira
Journal:  PLoS One       Date:  2015-03-23       Impact factor: 3.240

3.  Effects of interspecific interaction-linked habitat factors on moose resource selection and environmental stress.

Authors:  Heng Bao; John M Fryxell; Hui Liu; Hongliang Dou; Yingjie Ma; Guangshun Jiang
Journal:  Sci Rep       Date:  2017-01-27       Impact factor: 4.379

4.  Using geomorphological variables to predict the spatial distribution of plant species in agricultural drainage networks.

Authors:  Gabrielle Rudi; Jean-Stéphane Bailly; Fabrice Vinatier
Journal:  PLoS One       Date:  2018-01-23       Impact factor: 3.240

5.  Different life stage, different risks: Thermal performance across the life cycle of Salmo trutta and Salmo salar in the face of climate change.

Authors:  Oskar Kärcher; Martina Flörke; Danijela Markovic
Journal:  Ecol Evol       Date:  2021-06-08       Impact factor: 2.912

6.  Predicting Spatial Patterns of Sindbis Virus (SINV) Infection Risk in Finland Using Vector, Host and Environmental Data.

Authors:  Ruut Uusitalo; Mika Siljander; C Lorna Culverwell; Guy Hendrickx; Andreas Lindén; Timothée Dub; Juha Aalto; Jussi Sane; Cedric Marsboom; Maija T Suvanto; Andrea Vajda; Hilppa Gregow; Essi M Korhonen; Eili Huhtamo; Petri Pellikka; Olli Vapalahti
Journal:  Int J Environ Res Public Health       Date:  2021-07-01       Impact factor: 3.390

7.  Consensus Statement on Electronic Health Predictive Analytics: A Guiding Framework to Address Challenges.

Authors:  Ruben Amarasingham; Anne-Marie J Audet; David W Bates; I Glenn Cohen; Martin Entwistle; G J Escobar; Vincent Liu; Lynn Etheredge; Bernard Lo; Lucila Ohno-Machado; Sudha Ram; Suchi Saria; Lisa M Schilling; Anand Shahi; Walter F Stewart; Ewout W Steyerberg; Bin Xie
Journal:  EGEMS (Wash DC)       Date:  2016-03-07

8.  Ecological Niche Modelling Predicts Southward Expansion of Lutzomyia (Nyssomyia) flaviscutellata (Diptera: Psychodidae: Phlebotominae), Vector of Leishmania (Leishmania) amazonensis in South America, under Climate Change.

Authors:  Bruno M Carvalho; Elizabeth F Rangel; Paul D Ready; Mariana M Vale
Journal:  PLoS One       Date:  2015-11-30       Impact factor: 3.240

9.  Modelling the Distribution of Forest-Dependent Species in Human-Dominated Landscapes: Patterns for the Pine Marten in Intensively Cultivated Lowlands.

Authors:  Alessandro Balestrieri; Giuseppe Bogliani; Giovanni Boano; Aritz Ruiz-González; Nicola Saino; Stefano Costa; Pietro Milanesi
Journal:  PLoS One       Date:  2016-07-01       Impact factor: 3.240

10.  Projecting the Global Distribution of the Emerging Amphibian Fungal Pathogen, Batrachochytrium dendrobatidis, Based on IPCC Climate Futures.

Authors:  Gisselle Yang Xie; Deanna H Olson; Andrew R Blaustein
Journal:  PLoS One       Date:  2016-08-11       Impact factor: 3.240

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