Literature DB >> 23730359

Quantum-like model for the adaptive dynamics of the genetic regulation of E. coli's metabolism of glucose/lactose.

Masanari Asano1, Irina Basieva, Andrei Khrennikov, Masanori Ohya, Yoshiharu Tanaka, Ichiro Yamato.   

Abstract

We developed a quantum-like model describing the gene regulation of glucose/lactose metabolism in a bacterium, Escherichia coli. Our quantum-like model can be considered as a kind of the operational formalism for microbiology and genetics. Instead of trying to describe processes in a cell in the very detail, we propose a formal operator description. Such a description may be very useful in situation in which the detailed description of processes is impossible or extremely complicated. We analyze statistical data obtained from experiments, and we compute the degree of E. coli's preference within adaptive dynamics. It is known that there are several types of E. coli characterized by the metabolic system. We demonstrate that the same type of E. coli can be described by the well determined operators; we find invariant operator quantities characterizing each type. Such invariant quantities can be calculated from the obtained statistical data.

Entities:  

Keywords:  Adaptive systems; Glucose/lactose metabolism in Escherichia coli; Lifting; Quantum channel; Quantum operators for glucose/lactose metabolism; Quantum-like operational approach

Year:  2012        PMID: 23730359      PMCID: PMC3424196          DOI: 10.1007/s11693-012-9091-1

Source DB:  PubMed          Journal:  Syst Synth Biol        ISSN: 1872-5325


  4 in total

1.  Mechanism responsible for glucose-lactose diauxie in Escherichia coli: challenge to the cAMP model.

Authors:  T Inada; K Kimata; H Aiba
Journal:  Genes Cells       Date:  1996-03       Impact factor: 1.891

2.  Genetic regulatory mechanisms in the synthesis of proteins.

Authors:  F JACOB; J MONOD
Journal:  J Mol Biol       Date:  1961-06       Impact factor: 5.469

3.  Quantum-like interference effect in gene expression: glucose-lactose destructive interference.

Authors:  Irina Basieva; Andrei Khrennikov; Masanori Ohya; Ichiro Yamato
Journal:  Syst Synth Biol       Date:  2011-03-20

4.  Quantum-like model of brain's functioning: decision making from decoherence.

Authors:  Masanari Asano; Masanori Ohya; Yoshiharu Tanaka; Irina Basieva; Andrei Khrennikov
Journal:  J Theor Biol       Date:  2011-05-07       Impact factor: 2.691

  4 in total
  4 in total

1.  A model of epigenetic evolution based on theory of open quantum systems.

Authors:  Masanari Asano; Irina Basieva; Andrei Khrennikov; Masanori Ohya; Yoshiharu Tanaka; Ichiro Yamato
Journal:  Syst Synth Biol       Date:  2013-06-18

2.  Quantum Bayesianism as the basis of general theory of decision-making.

Authors:  Andrei Khrennikov
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2016-05-28       Impact factor: 4.226

3.  A model of adaptive decision-making from representation of information environment by quantum fields.

Authors:  F Bagarello; E Haven; A Khrennikov
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-11-13       Impact factor: 4.226

4.  Order-Stability in Complex Biological, Social, and AI-Systems from Quantum Information Theory.

Authors:  Andrei Khrennikov; Noboru Watanabe
Journal:  Entropy (Basel)       Date:  2021-03-16       Impact factor: 2.524

  4 in total

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