Literature DB >> 23725062

Reactive ground-state pathways are not ubiquitous in red/green cyanobacteriochromes.

Che-Wei Chang1, Sean M Gottlieb, Peter W Kim, Nathan C Rockwell, J Clark Lagarias, Delmar S Larsen.   

Abstract

Recent characterization of the red/green cyanobacteriochrome (CBCR) NpR6012g4 revealed a high quantum yield for its forward photoreaction [J. Am. Chem. Soc. 2012, 134, 130-133] that was ascribed to the activity of hidden, productive ground-state intermediates. The dynamics of the pathways involving these ground-state intermediates was resolved with femtosecond dispersed pump-dump-probe spectroscopy, the first such study reported for any CBCR. To address the ubiquity of such second-chance initiation dynamics (SCID) in CBCRs, we examined the closely related red/green CBCR NpF2164g6 from Nostoc punctiforme. Both NpF2164g6 and NpR6012g4 use phycocyanobilin as the chromophore precursor and exhibit similar excited-state dynamics. However, NpF2164g6 exhibits a lower quantum yield of 32% for the generation of the isomerized Lumi-R primary photoproduct, compared to 40% for NpR6012g4. This difference arises from significantly different ground-state dynamics between the two proteins, with the SCID mechanism deactivated in NpF2164g6. We present an integrated inhomogeneous target model that self-consistently fits the pump-probe and pump-dump-probe signals for both forward and reverse photoreactions in both proteins. This work demonstrates that reactive ground-state intermediates are not ubiquitous phenomena in CBCRs.

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Year:  2013        PMID: 23725062     DOI: 10.1021/jp402112u

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  6 in total

1.  The interplay between chromophore and protein determines the extended excited state dynamics in a single-domain phytochrome.

Authors:  Chavdar Slavov; Tobias Fischer; Avishai Barnoy; Heewhan Shin; Aditya G Rao; Christian Wiebeler; Xiaoli Zeng; Yafang Sun; Qianzhao Xu; Alexander Gutt; Kai-Hong Zhao; Wolfgang Gärtner; Xiaojing Yang; Igor Schapiro; Josef Wachtveitl
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-26       Impact factor: 11.205

2.  Protein-chromophore interactions controlling photoisomerization in red/green cyanobacteriochromes.

Authors:  Nathan C Rockwell; Marcus V Moreno; Shelley S Martin; J Clark Lagarias
Journal:  Photochem Photobiol Sci       Date:  2022-04-11       Impact factor: 4.328

3.  NMR chemical shift pattern changed by ammonium sulfate precipitation in cyanobacterial phytochrome Cph1.

Authors:  Chen Song; Christina Lang; Jakub Kopycki; Jon Hughes; Jörg Matysik
Journal:  Front Mol Biosci       Date:  2015-07-28

4.  Heterogeneous photodynamics of the pfr state in the cyanobacterial phytochrome Cph1.

Authors:  Peter W Kim; Nathan C Rockwell; Shelley S Martin; J Clark Lagarias; Delmar S Larsen
Journal:  Biochemistry       Date:  2014-07-08       Impact factor: 3.162

5.  Dynamic inhomogeneity in the photodynamics of cyanobacterial phytochrome Cph1.

Authors:  Peter W Kim; Nathan C Rockwell; Shelley S Martin; J Clark Lagarias; Delmar S Larsen
Journal:  Biochemistry       Date:  2014-04-21       Impact factor: 3.162

6.  The Cruciality of Single Amino Acid Replacement for the Spectral Tuning of Biliverdin-Binding Cyanobacteriochromes.

Authors:  Keiji Fushimi; Hiroki Hoshino; Naeko Shinozaki-Narikawa; Yuto Kuwasaki; Keita Miyake; Takahiro Nakajima; Moritoshi Sato; Fumi Kano; Rei Narikawa
Journal:  Int J Mol Sci       Date:  2020-08-30       Impact factor: 5.923

  6 in total

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