Literature DB >> 23723949

(E)-3-[4-(Di-fluoro-meth-oxy)-3-hy-droxy-phen-yl]-1-phenyl-prop-2-en-1-one.

Thothadri Srinivasan1, Govindaraj Senthilkumar, Kaliaperumal Neelakandan, Haridoss Manikandan, Devadasan Velmurugan.   

Abstract

In the title compound, C16H12F2O3, the plane of the phenyl ring makes a dihedral angle of 3.22 (8)° with that of the benzene ring. The mol-ecule has an E conformation about the C=C bond. In the crystal, mol-ecules are linked via pairs of O-H⋯O hydrogen bonds, forming inversion dimers which are further consolidated by a pair of C-H⋯O hydrogen bonds. The dimers are linked via C-H⋯O hydrogen bonds, forming columns along the b-axis direction.

Entities:  

Year:  2013        PMID: 23723949      PMCID: PMC3648329          DOI: 10.1107/S1600536813011288

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of chalcones, see: Di Carlo et al. (1999 ▶); Lin et al. (2002 ▶). For a related structure, see: Ranjith et al. (2010 ▶).

Experimental

Crystal data

C16H12F2O3 M = 290.26 Monoclinic, a = 17.1880 (11) Å b = 4.1124 (3) Å c = 19.6699 (13) Å β = 106.289 (4)° V = 1334.54 (16) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 293 K 0.30 × 0.25 × 0.20 mm

Data collection

Bruker SMART APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.966, T max = 0.977 12412 measured reflections 3328 independent reflections 2456 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.120 S = 1.03 3328 reflections 191 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813011288/su2584sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813011288/su2584Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813011288/su2584Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12F2O3F(000) = 600
Mr = 290.26Dx = 1.445 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3328 reflections
a = 17.1880 (11) Åθ = 1.4–28.3°
b = 4.1124 (3) ŵ = 0.12 mm1
c = 19.6699 (13) ÅT = 293 K
β = 106.289 (4)°Block, colourless
V = 1334.54 (16) Å30.30 × 0.25 × 0.20 mm
Z = 4
Bruker SMART APEXII area-detector diffractometer3328 independent reflections
Radiation source: fine-focus sealed tube2456 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
ω and φ scansθmax = 28.3°, θmin = 1.4°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −22→21
Tmin = 0.966, Tmax = 0.977k = −5→5
12412 measured reflectionsl = −26→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.120H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0528P)2 + 0.3218P] where P = (Fo2 + 2Fc2)/3
3328 reflections(Δ/σ)max < 0.001
191 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. #========================================================================= # 8. Refinement Data #========================================================================= Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.58013 (9)0.9403 (4)0.34909 (8)0.0501 (4)
H10.55530.73230.33050.060*
C20.57744 (8)1.0801 (3)0.23416 (7)0.0408 (3)
C30.52043 (8)0.8962 (3)0.18585 (7)0.0406 (3)
C40.53484 (8)0.8222 (4)0.12164 (7)0.0421 (3)
H40.49690.70010.08850.051*
C50.60481 (7)0.9264 (3)0.10571 (7)0.0399 (3)
C60.66097 (8)1.1133 (4)0.15554 (7)0.0459 (3)
H60.70781.18720.14570.055*
C70.64685 (9)1.1882 (4)0.21944 (8)0.0478 (3)
H70.68431.31200.25270.057*
C80.61704 (8)0.8271 (4)0.03816 (7)0.0443 (3)
H80.57630.69900.00940.053*
C90.67854 (8)0.8960 (4)0.01260 (7)0.0471 (3)
H90.72031.02750.03880.057*
C100.68243 (8)0.7696 (4)−0.05624 (7)0.0434 (3)
C110.75269 (8)0.8529 (3)−0.08315 (7)0.0429 (3)
C120.75121 (10)0.7547 (4)−0.15079 (8)0.0587 (4)
H120.70620.6441−0.17850.070*
C130.81561 (11)0.8191 (5)−0.17761 (9)0.0662 (5)
H130.81430.7488−0.22290.079*
C140.88160 (10)0.9868 (5)−0.13757 (10)0.0655 (5)
H140.92471.0326−0.15600.079*
C150.88416 (10)1.0869 (5)−0.07064 (10)0.0710 (5)
H150.92911.1997−0.04350.085*
C160.81987 (9)1.0202 (4)−0.04329 (8)0.0576 (4)
H160.82191.08850.00220.069*
O10.56344 (6)1.1715 (2)0.29861 (5)0.0490 (3)
O20.45380 (6)0.7923 (3)0.20384 (5)0.0547 (3)
H20.42530.68300.17150.082*
O30.62832 (6)0.5935 (3)−0.09091 (6)0.0615 (3)
F10.65995 (7)0.9098 (4)0.37665 (6)0.1057 (5)
F20.55249 (7)1.0449 (3)0.40166 (5)0.0779 (3)
U11U22U33U12U13U23
C10.0568 (8)0.0515 (8)0.0449 (7)0.0069 (7)0.0190 (6)−0.0019 (6)
C20.0461 (7)0.0362 (7)0.0401 (6)0.0061 (6)0.0120 (5)−0.0010 (5)
C30.0368 (6)0.0450 (7)0.0406 (6)0.0024 (6)0.0120 (5)0.0022 (6)
C40.0366 (6)0.0507 (8)0.0384 (6)−0.0055 (6)0.0097 (5)−0.0029 (6)
C50.0374 (6)0.0424 (7)0.0404 (6)0.0006 (5)0.0116 (5)0.0038 (5)
C60.0398 (7)0.0487 (8)0.0508 (8)−0.0063 (6)0.0153 (6)0.0009 (6)
C70.0480 (7)0.0440 (8)0.0486 (7)−0.0067 (6)0.0090 (6)−0.0057 (6)
C80.0409 (7)0.0521 (8)0.0406 (7)−0.0057 (6)0.0124 (5)0.0000 (6)
C90.0429 (7)0.0560 (9)0.0441 (7)−0.0083 (6)0.0150 (6)−0.0016 (6)
C100.0395 (7)0.0498 (8)0.0419 (7)−0.0032 (6)0.0128 (5)0.0042 (6)
C110.0420 (7)0.0457 (8)0.0436 (7)0.0005 (6)0.0165 (5)0.0058 (6)
C120.0577 (9)0.0730 (11)0.0498 (8)−0.0128 (8)0.0224 (7)−0.0035 (8)
C130.0730 (11)0.0793 (12)0.0581 (9)−0.0036 (10)0.0377 (8)0.0019 (9)
C140.0554 (9)0.0719 (11)0.0814 (12)0.0000 (8)0.0394 (9)0.0111 (10)
C150.0479 (9)0.0908 (14)0.0791 (12)−0.0185 (9)0.0258 (8)−0.0072 (10)
C160.0483 (8)0.0727 (11)0.0551 (8)−0.0111 (8)0.0200 (7)−0.0068 (8)
O10.0638 (6)0.0415 (5)0.0433 (5)0.0093 (5)0.0178 (4)−0.0050 (4)
O20.0452 (5)0.0768 (8)0.0471 (5)−0.0116 (5)0.0214 (4)−0.0088 (5)
O30.0530 (6)0.0835 (8)0.0511 (6)−0.0251 (6)0.0199 (5)−0.0131 (6)
F10.0658 (7)0.1779 (15)0.0725 (7)0.0482 (8)0.0180 (5)0.0333 (8)
F20.0913 (8)0.0979 (8)0.0562 (6)0.0185 (6)0.0402 (5)−0.0023 (5)
C1—F21.3250 (16)C8—H80.9300
C1—F11.3322 (18)C9—C101.4693 (19)
C1—O11.3461 (18)C9—H90.9300
C1—H10.9800C10—O31.2244 (16)
C2—C71.378 (2)C10—C111.4880 (17)
C2—C31.3830 (19)C11—C161.383 (2)
C2—O11.4063 (16)C11—C121.384 (2)
C3—O21.3589 (15)C12—C131.379 (2)
C3—C41.3873 (18)C12—H120.9300
C4—C51.3925 (17)C13—C141.372 (3)
C4—H40.9300C13—H130.9300
C5—C61.3974 (19)C14—C151.368 (3)
C5—C81.4605 (18)C14—H140.9300
C6—C71.380 (2)C15—C161.385 (2)
C6—H60.9300C15—H150.9300
C7—H70.9300C16—H160.9300
C8—C91.3223 (18)O2—H20.8200
F2—C1—F1105.47 (13)C8—C9—C10121.50 (13)
F2—C1—O1107.31 (12)C8—C9—H9119.3
F1—C1—O1110.42 (14)C10—C9—H9119.3
F2—C1—H1111.1O3—C10—C9119.92 (12)
F1—C1—H1111.1O3—C10—C11120.23 (12)
O1—C1—H1111.1C9—C10—C11119.85 (12)
C7—C2—C3121.35 (12)C16—C11—C12118.51 (13)
C7—C2—O1118.71 (12)C16—C11—C10122.99 (13)
C3—C2—O1119.88 (12)C12—C11—C10118.50 (13)
O2—C3—C2118.64 (12)C13—C12—C11120.78 (15)
O2—C3—C4123.15 (12)C13—C12—H12119.6
C2—C3—C4118.20 (12)C11—C12—H12119.6
C3—C4—C5121.55 (12)C14—C13—C12120.00 (16)
C3—C4—H4119.2C14—C13—H13120.0
C5—C4—H4119.2C12—C13—H13120.0
C4—C5—C6118.80 (12)C15—C14—C13120.14 (15)
C4—C5—C8118.20 (12)C15—C14—H14119.9
C6—C5—C8122.99 (12)C13—C14—H14119.9
C7—C6—C5119.88 (12)C14—C15—C16120.01 (16)
C7—C6—H6120.1C14—C15—H15120.0
C5—C6—H6120.1C16—C15—H15120.0
C2—C7—C6120.21 (13)C11—C16—C15120.55 (15)
C2—C7—H7119.9C11—C16—H16119.7
C6—C7—H7119.9C15—C16—H16119.7
C9—C8—C5128.35 (13)C1—O1—C2114.90 (10)
C9—C8—H8115.8C3—O2—H2109.5
C5—C8—H8115.8
C7—C2—C3—O2178.98 (13)C8—C9—C10—C11179.99 (14)
O1—C2—C3—O2−3.68 (19)O3—C10—C11—C16−172.66 (15)
C7—C2—C3—C40.0 (2)C9—C10—C11—C166.6 (2)
O1—C2—C3—C4177.37 (12)O3—C10—C11—C126.5 (2)
O2—C3—C4—C5−178.42 (13)C9—C10—C11—C12−174.29 (14)
C2—C3—C4—C50.5 (2)C16—C11—C12—C130.7 (3)
C3—C4—C5—C6−0.8 (2)C10—C11—C12—C13−178.48 (15)
C3—C4—C5—C8177.55 (13)C11—C12—C13—C14−1.1 (3)
C4—C5—C6—C70.7 (2)C12—C13—C14—C150.9 (3)
C8—C5—C6—C7−177.60 (14)C13—C14—C15—C16−0.3 (3)
C3—C2—C7—C6−0.2 (2)C12—C11—C16—C15−0.1 (3)
O1—C2—C7—C6−177.53 (12)C10—C11—C16—C15179.00 (16)
C5—C6—C7—C2−0.2 (2)C14—C15—C16—C11−0.1 (3)
C4—C5—C8—C9−179.68 (15)F2—C1—O1—C2−170.69 (12)
C6—C5—C8—C9−1.4 (3)F1—C1—O1—C274.84 (16)
C5—C8—C9—C10178.56 (14)C7—C2—O1—C1−101.79 (16)
C8—C9—C10—O3−0.8 (2)C3—C2—O1—C180.80 (16)
D—H···AD—HH···AD···AD—H···A
O2—H2···O3i0.821.962.7722 (16)172
C4—H4···O3i0.932.483.1940 (19)134
C1—H1···O1ii0.982.403.3022 (19)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2⋯O3i 0.821.962.7722 (16)172
C4—H4⋯O3i 0.932.483.1940 (19)134
C1—H1⋯O1ii 0.982.403.3022 (19)152

Symmetry codes: (i) ; (ii) .

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