Literature DB >> 23723947

1,2-Bis(2,4-di-nitro-phen-yl)disulfane.

Selvarasu Muthulakshmi1, Doraisamyraja Kalaivani.   

Abstract

In the title mol-ecule, C12H6N4O8S2, the dihedral angle between the benzene rings is 77.00 (8)°. The mean planes of the nitro groups are twisted slightly from the benzene rings, forming dihedral angles in the range 2.3 (2)-8.6 (3)°. The S-S bond length is 2.0458 (7) Å. Each S atom is essentially coplanar with the benzene ring to which it is attached, with deviations from the ring planes of 0.0163 (5) and 0.0538 (5) Å. In the crystal, mol-ecules are linked through weak C-H⋯O hydrogen bonds, forming a two-dimensional network parallel to (001).

Entities:  

Year:  2013        PMID: 23723947      PMCID: PMC3648327          DOI: 10.1107/S1600536813011082

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For synthetic applications of di­sulfides, see: Khavasch et al. (1950 ▶); Mitin & Zaperalova (1974 ▶); Stepanov et al. (1974 ▶, 1977 ▶); Cochran et al. (1996 ▶). For the natural occurrence of di­sulfides, see: Ramadas & Srinivasan (1995 ▶). For the preparation procedures for di­sulfides, see: Khavasch & Cameron (1951 ▶); Traynelis & Rieck (1973 ▶); Bilozor & Boldyrev (1984 ▶). For standard bond lengths, see: Allen et al. (1987 ▶). For related structures, see: Glidewell et al. (2000 ▶); Song & Fan (2009 ▶); Xiao et al. (2010 ▶); Buvaneswari et al. (2012 ▶). For hydrogen-bond graph-set motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C12H6N4O8S2 M = 398.33 Monoclinic, a = 11.3776 (6) Å b = 11.9579 (5) Å c = 11.0459 (6) Å β = 90.943 (2)° V = 1502.62 (13) Å3 Z = 4 Mo Kα radiation μ = 0.41 mm−1 T = 293 K 0.25 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.804, T max = 0.922 22589 measured reflections 5706 independent reflections 3983 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.141 S = 1.02 5706 reflections 235 parameters H-atom parameters constrained Δρmax = 0.44 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813011082/lh5606sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813011082/lh5606Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813011082/lh5606Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H6N4O8S2F(000) = 808
Mr = 398.33Dx = 1.761 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7792 reflections
a = 11.3776 (6) Åθ = 2.5–30.2°
b = 11.9579 (5) ŵ = 0.41 mm1
c = 11.0459 (6) ÅT = 293 K
β = 90.943 (2)°Block, yellow
V = 1502.62 (13) Å30.25 × 0.20 × 0.20 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer5706 independent reflections
Radiation source: fine-focus sealed tube3983 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.025
ω and φ scanθmax = 33.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −17→16
Tmin = 0.804, Tmax = 0.922k = −17→18
22589 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.141H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0681P)2 + 0.4377P] where P = (Fo2 + 2Fc2)/3
5706 reflections(Δ/σ)max < 0.001
235 parametersΔρmax = 0.44 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.94644 (14)0.13448 (15)0.26049 (15)0.0423 (3)
C20.87515 (16)0.21656 (14)0.21366 (17)0.0459 (4)
H20.87040.28630.25040.055*
C30.81090 (15)0.19244 (13)0.11069 (16)0.0414 (3)
C40.81370 (13)0.08818 (12)0.05402 (14)0.0360 (3)
C50.88741 (14)0.00751 (13)0.10614 (15)0.0402 (3)
H50.8917−0.06310.07110.048*
C60.95385 (14)0.03052 (14)0.20845 (16)0.0423 (3)
H61.0032−0.02370.24190.051*
C70.56165 (13)−0.32356 (13)0.13396 (14)0.0357 (3)
C80.62734 (13)−0.37316 (13)0.04595 (15)0.0386 (3)
H80.6302−0.45050.03800.046*
C90.68881 (13)−0.30433 (13)−0.03018 (14)0.0358 (3)
C100.68625 (12)−0.18758 (13)−0.02111 (13)0.0342 (3)
C110.61794 (14)−0.14233 (13)0.07059 (15)0.0391 (3)
H110.6145−0.06510.07980.047*
C120.55557 (14)−0.20961 (13)0.14776 (15)0.0385 (3)
H120.5101−0.17840.20820.046*
N11.01562 (15)0.15860 (17)0.37076 (16)0.0594 (4)
N20.73842 (17)0.28314 (13)0.06113 (19)0.0586 (4)
N30.49685 (13)−0.39543 (13)0.21674 (14)0.0477 (3)
N40.75847 (13)−0.36018 (14)−0.12208 (14)0.0476 (3)
O11.08349 (18)0.0867 (2)0.40606 (18)0.0917 (6)
O21.00333 (17)0.24936 (18)0.41926 (17)0.0815 (5)
O30.7298 (2)0.36795 (16)0.1202 (2)0.1180 (9)
O40.69201 (16)0.26986 (13)−0.03687 (19)0.0752 (5)
O50.44650 (15)−0.35239 (14)0.30093 (15)0.0700 (4)
O60.49935 (17)−0.49559 (13)0.19861 (18)0.0799 (5)
O70.75453 (16)−0.46121 (13)−0.12824 (17)0.0778 (5)
O80.81704 (14)−0.30190 (14)−0.18852 (14)0.0655 (4)
S10.72498 (4)0.05824 (4)−0.07550 (4)0.04737 (13)
S20.76812 (4)−0.10241 (4)−0.12039 (4)0.04554 (12)
U11U22U33U12U13U23
C10.0357 (7)0.0502 (9)0.0413 (8)−0.0104 (6)0.0067 (6)−0.0055 (7)
C20.0488 (9)0.0382 (8)0.0513 (9)−0.0065 (7)0.0143 (7)−0.0080 (7)
C30.0412 (8)0.0335 (7)0.0499 (9)−0.0008 (6)0.0103 (7)0.0043 (6)
C40.0359 (7)0.0335 (7)0.0390 (7)−0.0070 (5)0.0064 (6)0.0041 (5)
C50.0407 (8)0.0332 (7)0.0467 (8)−0.0027 (6)0.0038 (6)−0.0013 (6)
C60.0356 (7)0.0427 (8)0.0487 (9)−0.0013 (6)0.0020 (6)0.0029 (7)
C70.0326 (7)0.0360 (7)0.0384 (7)−0.0004 (5)0.0012 (5)0.0030 (5)
C80.0381 (7)0.0320 (6)0.0458 (8)0.0035 (5)−0.0016 (6)−0.0028 (6)
C90.0325 (7)0.0387 (7)0.0360 (7)0.0036 (5)0.0004 (5)−0.0076 (6)
C100.0318 (6)0.0378 (7)0.0331 (6)−0.0037 (5)0.0009 (5)−0.0017 (5)
C110.0427 (8)0.0309 (6)0.0440 (8)−0.0003 (6)0.0077 (6)−0.0032 (6)
C120.0383 (7)0.0362 (7)0.0414 (8)0.0024 (6)0.0097 (6)−0.0032 (6)
N10.0498 (9)0.0760 (12)0.0524 (9)−0.0147 (8)−0.0006 (7)−0.0107 (8)
N20.0671 (11)0.0374 (8)0.0714 (11)0.0071 (7)0.0062 (9)0.0083 (7)
N30.0443 (8)0.0449 (8)0.0540 (9)−0.0049 (6)0.0050 (6)0.0119 (6)
N40.0445 (8)0.0499 (8)0.0485 (8)0.0045 (6)0.0063 (6)−0.0146 (6)
O10.0865 (13)0.1028 (15)0.0845 (13)0.0076 (11)−0.0384 (10)−0.0111 (11)
O20.0828 (12)0.0917 (12)0.0701 (11)−0.0154 (10)0.0018 (9)−0.0382 (9)
O30.196 (3)0.0589 (11)0.0986 (15)0.0615 (14)−0.0184 (16)−0.0123 (10)
O40.0770 (11)0.0504 (8)0.0972 (13)0.0045 (7)−0.0282 (10)0.0116 (8)
O50.0730 (10)0.0733 (10)0.0646 (9)−0.0068 (8)0.0304 (8)0.0071 (8)
O60.0989 (13)0.0415 (7)0.1001 (13)−0.0095 (8)0.0274 (10)0.0162 (8)
O70.0914 (12)0.0486 (8)0.0946 (13)0.0047 (8)0.0382 (10)−0.0246 (8)
O80.0707 (9)0.0673 (9)0.0594 (8)−0.0052 (7)0.0297 (7)−0.0162 (7)
S10.0535 (3)0.0414 (2)0.0469 (2)−0.00851 (17)−0.00634 (18)0.00949 (16)
S20.0508 (2)0.0483 (2)0.0377 (2)−0.01204 (17)0.00926 (16)−0.00253 (16)
C1—C21.369 (3)C9—C101.400 (2)
C1—C61.373 (2)C9—N41.460 (2)
C1—N11.468 (2)C10—C111.396 (2)
C2—C31.373 (3)C10—S21.7723 (15)
C2—H20.9300C11—C121.378 (2)
C3—C41.396 (2)C11—H110.9300
C3—N21.463 (2)C12—H120.9300
C4—C51.396 (2)N1—O11.216 (3)
C4—S11.7738 (16)N1—O21.219 (3)
C5—C61.377 (2)N2—O41.207 (3)
C5—H50.9300N2—O31.211 (3)
C6—H60.9300N3—O51.215 (2)
C7—C81.371 (2)N3—O61.215 (2)
C7—C121.373 (2)N4—O71.211 (2)
C7—N31.463 (2)N4—O81.218 (2)
C8—C91.376 (2)S1—S22.0458 (7)
C8—H80.9300
C2—C1—C6122.07 (16)C8—C9—N4116.01 (14)
C2—C1—N1118.61 (17)C10—C9—N4121.21 (14)
C6—C1—N1119.31 (17)C11—C10—C9116.81 (13)
C1—C2—C3117.81 (15)C11—C10—S2122.06 (12)
C1—C2—H2121.1C9—C10—S2121.13 (11)
C3—C2—H2121.1C12—C11—C10121.42 (14)
C2—C3—C4122.93 (15)C12—C11—H11119.3
C2—C3—N2116.33 (16)C10—C11—H11119.3
C4—C3—N2120.74 (16)C7—C12—C11118.92 (14)
C3—C4—C5116.76 (15)C7—C12—H12120.5
C3—C4—S1121.68 (12)C11—C12—H12120.5
C5—C4—S1121.54 (12)O1—N1—O2124.45 (19)
C6—C5—C4121.21 (15)O1—N1—C1117.14 (19)
C6—C5—H5119.4O2—N1—C1118.4 (2)
C4—C5—H5119.4O4—N2—O3123.72 (19)
C1—C6—C5119.21 (16)O4—N2—C3118.27 (17)
C1—C6—H6120.4O3—N2—C3118.0 (2)
C5—C6—H6120.4O5—N3—O6123.81 (17)
C8—C7—C12122.49 (14)O5—N3—C7118.59 (15)
C8—C7—N3118.38 (14)O6—N3—C7117.57 (16)
C12—C7—N3119.13 (14)O7—N4—O8123.85 (16)
C7—C8—C9117.59 (14)O7—N4—C9118.39 (16)
C7—C8—H8121.2O8—N4—C9117.76 (15)
C9—C8—H8121.2C4—S1—S2104.44 (6)
C8—C9—C10122.78 (14)C10—S2—S1105.01 (5)
C6—C1—C2—C3−0.7 (3)N3—C7—C12—C11179.17 (14)
N1—C1—C2—C3−179.85 (15)C10—C11—C12—C70.3 (2)
C1—C2—C3—C41.3 (2)C2—C1—N1—O1−175.60 (19)
C1—C2—C3—N2−178.22 (15)C6—C1—N1—O15.2 (3)
C2—C3—C4—C5−0.9 (2)C2—C1—N1—O22.9 (3)
N2—C3—C4—C5178.56 (15)C6—C1—N1—O2−176.26 (18)
C2—C3—C4—S1177.43 (13)C2—C3—N2—O4171.12 (18)
N2—C3—C4—S1−3.1 (2)C4—C3—N2—O4−8.4 (3)
C3—C4—C5—C60.0 (2)C2—C3—N2—O3−7.9 (3)
S1—C4—C5—C6−178.38 (12)C4—C3—N2—O3172.6 (2)
C2—C1—C6—C5−0.2 (3)C8—C7—N3—O5173.98 (16)
N1—C1—C6—C5178.95 (15)C12—C7—N3—O5−5.4 (2)
C4—C5—C6—C10.6 (2)C8—C7—N3—O6−4.1 (2)
C12—C7—C8—C90.1 (2)C12—C7—N3—O6176.51 (17)
N3—C7—C8—C9−179.24 (13)C8—C9—N4—O72.6 (2)
C7—C8—C9—C10−0.2 (2)C10—C9—N4—O7−177.71 (17)
C7—C8—C9—N4179.53 (14)C8—C9—N4—O8−177.67 (16)
C8—C9—C10—C110.3 (2)C10—C9—N4—O82.1 (2)
N4—C9—C10—C11−179.36 (14)C3—C4—S1—S2178.71 (12)
C8—C9—C10—S2179.38 (12)C5—C4—S1—S2−3.03 (14)
N4—C9—C10—S2−0.3 (2)C11—C10—S2—S1−4.57 (14)
C9—C10—C11—C12−0.4 (2)C9—C10—S2—S1176.45 (11)
S2—C10—C11—C12−179.43 (13)C4—S1—S2—C1080.78 (7)
C8—C7—C12—C11−0.2 (2)
D—H···AD—HH···AD···AD—H···A
C5—H5···O2i0.932.543.341 (3)144
C8—H8···O3ii0.932.603.403 (2)144
C12—H12···O6iii0.932.423.139 (2)134
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5⋯O2i 0.932.543.341 (3)144
C8—H8⋯O3ii 0.932.603.403 (2)144
C12—H12⋯O6iii 0.932.423.139 (2)134

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Conformational preferences and supramolecular aggregation in 2-nitrophenylthiolates: disulfides and thiosulfonates.

Authors:  C Glidewell; J N Low; J L Wardell
Journal:  Acta Crystallogr B       Date:  2000-10-01

3.  1,2-Bis(2-nitro-phen-yl)disulfane.

Authors:  Mingzhi Song; Chuangang Fan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-23

4.  1,2-Bis(4-ethynylphen-yl)disulfane.

Authors:  Qi Xiao; Rui Liu; Yu-Hao Li; Hong-Bin Chen; Hong-Jun Zhu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-13

5.  Bis(2,4-dinitro-phen-yl)sulfane.

Authors:  M Buvaneswari; D Kalaivani; M Nethaji
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-13
  5 in total

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