| Literature DB >> 23723929 |
Ke Wang1, Yifeng Wang, Minjie Yao, Danqian Xu.
Abstract
In the title compound, C20H25NO5, the di-hydro-pyridine ring adopts a flattened boat conformation. The meth-oxy-phenyl ring is almost perpendicular to the mean plane of the pyridine ring [dihedral angle = 88.42 (3)°]. The two carbonyl units adopt a synperiplanar conformation with respect to the double bonds in the di-hydro-pyridine ring. In the crystal, mol-ecules are connected by N-H⋯O hydrogen bonds into R 4 (4)(24) tetra-meric rings. A region of disordered electron density, located at the center of four adjacent mol-ecules, was treated with the SQUEEZE routine in PLATON [Spek (2009 ▶). Acta Cryst. D65, 148-155]. It is probably the result of traces of the solvent of crystallization and was not taken into account during the structure refinement.Entities:
Year: 2013 PMID: 23723929 PMCID: PMC3648309 DOI: 10.1107/S1600536813009951
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H25NO5 | |
| Mo | |
| Tetragonal, | Cell parameters from 36625 reflections |
| Hall symbol: P -4 2n | θ = 3.1–27.4° |
| µ = 0.08 mm−1 | |
| Block, colorless | |
| 0.47 × 0.31 × 0.22 mm | |
| Rigaku R-AXIS RAPID/ZJUG diffractometer | 4755 independent reflections |
| Radiation source: rotating anode | 3128 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.00 pixels mm-1 | θmax = 27.5°, θmin = 3.1° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 60800 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4755 reflections | (Δ/σ)max = 0.008 |
| 241 parameters | Δρmax = 0.17 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.48258 (11) | 0.26476 (11) | 0.3185 (3) | 0.0488 (6) | |
| H1 | 0.5183 | 0.2658 | 0.3866 | 0.059* | |
| C2 | 0.43244 (11) | 0.29128 (12) | 0.4187 (3) | 0.0487 (6) | |
| C3 | 0.39385 (13) | 0.33091 (13) | 0.3545 (4) | 0.0559 (7) | |
| C4 | 0.45445 (13) | 0.34162 (12) | 0.1122 (3) | 0.0524 (7) | |
| C5 | 0.49582 (12) | 0.30287 (11) | 0.1698 (3) | 0.0482 (6) | |
| C6 | 0.47208 (12) | 0.19936 (12) | 0.2738 (3) | 0.0485 (6) | |
| C7 | 0.51178 (14) | 0.15615 (13) | 0.3240 (4) | 0.0623 (8) | |
| H7 | 0.5442 | 0.1673 | 0.3872 | 0.075* | |
| C8 | 0.50466 (18) | 0.09635 (15) | 0.2830 (5) | 0.0797 (10) | |
| H8 | 0.5316 | 0.0681 | 0.3207 | 0.096* | |
| C9 | 0.45815 (16) | 0.07942 (15) | 0.1875 (5) | 0.0802 (10) | |
| H9 | 0.4540 | 0.0397 | 0.1575 | 0.096* | |
| C10 | 0.41693 (16) | 0.12109 (14) | 0.1349 (4) | 0.0705 (8) | |
| H10 | 0.3851 | 0.1095 | 0.0700 | 0.085* | |
| C11 | 0.42368 (13) | 0.18025 (12) | 0.1801 (4) | 0.0546 (7) | |
| C12 | 0.33177 (15) | 0.20776 (18) | 0.0506 (5) | 0.0826 (11) | |
| H12A | 0.3415 | 0.1878 | −0.0490 | 0.124* | |
| H12B | 0.3088 | 0.2428 | 0.0273 | 0.124* | |
| H12C | 0.3090 | 0.1815 | 0.1184 | 0.124* | |
| C13 | 0.42649 (12) | 0.27102 (13) | 0.5869 (3) | 0.0515 (6) | |
| C14 | 0.47214 (15) | 0.21103 (14) | 0.7908 (3) | 0.0628 (8) | |
| H14A | 0.4387 | 0.1840 | 0.8019 | 0.075* | |
| H14B | 0.4685 | 0.2420 | 0.8722 | 0.075* | |
| C15 | 0.52918 (17) | 0.17829 (16) | 0.8121 (5) | 0.0817 (10) | |
| H15A | 0.5305 | 0.1453 | 0.7383 | 0.123* | |
| H15B | 0.5319 | 0.1639 | 0.9215 | 0.123* | |
| H15C | 0.5619 | 0.2046 | 0.7904 | 0.123* | |
| C16 | 0.34108 (15) | 0.35877 (18) | 0.4346 (5) | 0.0817 (10) | |
| H16A | 0.3139 | 0.3282 | 0.4683 | 0.123* | |
| H16B | 0.3215 | 0.3849 | 0.3594 | 0.123* | |
| H16C | 0.3539 | 0.3811 | 0.5275 | 0.123* | |
| C17 | 0.45761 (16) | 0.37777 (15) | −0.0409 (4) | 0.0698 (9) | |
| H17A | 0.4739 | 0.4163 | −0.0171 | 0.105* | |
| H17B | 0.4184 | 0.3823 | −0.0853 | 0.105* | |
| H17C | 0.4826 | 0.3579 | −0.1182 | 0.105* | |
| C18 | 0.55359 (12) | 0.29701 (12) | 0.0932 (4) | 0.0525 (7) | |
| C19 | 0.65098 (15) | 0.2576 (2) | 0.1250 (5) | 0.0846 (11) | |
| H19A | 0.6722 | 0.2949 | 0.1383 | 0.102* | |
| H19B | 0.6512 | 0.2471 | 0.0108 | 0.102* | |
| C20 | 0.6793 (2) | 0.2111 (3) | 0.2197 (7) | 0.140 (2) | |
| H20A | 0.6677 | 0.2149 | 0.3313 | 0.210* | |
| H20B | 0.7218 | 0.2148 | 0.2110 | 0.210* | |
| H20C | 0.6672 | 0.1729 | 0.1794 | 0.210* | |
| N1 | 0.40319 (10) | 0.35131 (11) | 0.1988 (3) | 0.0599 (6) | |
| H1A | 0.3752 | 0.3713 | 0.1532 | 0.072* | |
| O1 | 0.38505 (9) | 0.22427 (9) | 0.1319 (3) | 0.0636 (6) | |
| O2 | 0.47297 (9) | 0.23683 (10) | 0.6302 (2) | 0.0633 (6) | |
| O3 | 0.38594 (9) | 0.28131 (11) | 0.6811 (3) | 0.0712 (6) | |
| O4 | 0.59075 (8) | 0.26366 (10) | 0.1817 (3) | 0.0654 (6) | |
| O5 | 0.56955 (10) | 0.31897 (11) | −0.0357 (3) | 0.0738 (6) |
| C1 | 0.0473 (14) | 0.0528 (14) | 0.0462 (13) | 0.0037 (11) | 0.0026 (12) | 0.0049 (12) |
| C2 | 0.0461 (14) | 0.0570 (15) | 0.0429 (13) | −0.0004 (11) | 0.0039 (11) | −0.0004 (12) |
| C3 | 0.0520 (15) | 0.0602 (17) | 0.0554 (16) | 0.0044 (13) | 0.0034 (13) | 0.0039 (13) |
| C4 | 0.0585 (16) | 0.0496 (14) | 0.0490 (15) | −0.0008 (12) | −0.0007 (13) | 0.0047 (12) |
| C5 | 0.0511 (14) | 0.0492 (14) | 0.0442 (14) | −0.0067 (12) | 0.0027 (12) | 0.0024 (11) |
| C6 | 0.0525 (14) | 0.0499 (14) | 0.0432 (13) | 0.0026 (11) | 0.0073 (12) | 0.0077 (11) |
| C7 | 0.0605 (17) | 0.0605 (17) | 0.0659 (18) | 0.0080 (14) | 0.0056 (15) | 0.0099 (15) |
| C8 | 0.086 (2) | 0.0608 (19) | 0.092 (3) | 0.0170 (17) | 0.011 (2) | 0.0100 (18) |
| C9 | 0.089 (2) | 0.0545 (18) | 0.097 (3) | 0.0006 (17) | 0.012 (2) | 0.0019 (19) |
| C10 | 0.081 (2) | 0.0586 (18) | 0.072 (2) | −0.0094 (16) | 0.0081 (17) | −0.0001 (16) |
| C11 | 0.0564 (15) | 0.0543 (15) | 0.0530 (15) | −0.0003 (13) | 0.0088 (13) | 0.0092 (13) |
| C12 | 0.063 (2) | 0.088 (2) | 0.096 (3) | −0.0112 (18) | −0.0207 (18) | 0.013 (2) |
| C13 | 0.0530 (15) | 0.0578 (15) | 0.0439 (14) | −0.0028 (13) | 0.0014 (12) | −0.0015 (12) |
| C14 | 0.0764 (19) | 0.0706 (18) | 0.0415 (14) | −0.0027 (15) | 0.0005 (14) | 0.0091 (14) |
| C15 | 0.102 (3) | 0.080 (2) | 0.063 (2) | 0.017 (2) | −0.004 (2) | 0.0156 (18) |
| C16 | 0.0598 (19) | 0.102 (3) | 0.084 (2) | 0.0253 (19) | 0.0137 (18) | 0.006 (2) |
| C17 | 0.083 (2) | 0.0630 (18) | 0.0630 (19) | 0.0057 (17) | 0.0066 (17) | 0.0187 (16) |
| C18 | 0.0548 (15) | 0.0510 (14) | 0.0516 (15) | −0.0058 (12) | 0.0025 (13) | 0.0010 (13) |
| C19 | 0.0505 (17) | 0.123 (3) | 0.080 (2) | 0.0072 (19) | 0.0162 (17) | −0.003 (2) |
| C20 | 0.088 (3) | 0.194 (6) | 0.139 (4) | 0.073 (3) | 0.026 (3) | 0.045 (4) |
| N1 | 0.0559 (14) | 0.0657 (15) | 0.0580 (15) | 0.0110 (11) | 0.0007 (12) | 0.0094 (12) |
| O1 | 0.0616 (12) | 0.0581 (12) | 0.0711 (13) | −0.0028 (9) | −0.0114 (10) | 0.0088 (10) |
| O2 | 0.0647 (12) | 0.0804 (14) | 0.0447 (10) | 0.0107 (11) | 0.0054 (9) | 0.0094 (10) |
| O3 | 0.0668 (13) | 0.0950 (16) | 0.0517 (12) | 0.0103 (12) | 0.0162 (11) | 0.0039 (11) |
| O4 | 0.0472 (10) | 0.0853 (14) | 0.0637 (13) | 0.0086 (10) | 0.0097 (10) | 0.0092 (11) |
| O5 | 0.0707 (14) | 0.0829 (15) | 0.0678 (14) | −0.0057 (12) | 0.0180 (11) | 0.0189 (12) |
| C1—C2 | 1.519 (4) | C12—H12C | 0.9600 |
| C1—C5 | 1.525 (4) | C13—O3 | 1.220 (3) |
| C1—C6 | 1.533 (4) | C13—O2 | 1.345 (3) |
| C1—H1 | 0.9800 | C14—O2 | 1.446 (3) |
| C2—C3 | 1.351 (4) | C14—C15 | 1.488 (5) |
| C2—C13 | 1.466 (4) | C14—H14A | 0.9700 |
| C3—N1 | 1.379 (4) | C14—H14B | 0.9700 |
| C3—C16 | 1.494 (4) | C15—H15A | 0.9600 |
| C4—C5 | 1.359 (4) | C15—H15B | 0.9600 |
| C4—N1 | 1.373 (4) | C15—H15C | 0.9600 |
| C4—C17 | 1.503 (4) | C16—H16A | 0.9600 |
| C5—C18 | 1.449 (4) | C16—H16B | 0.9600 |
| C6—C7 | 1.382 (4) | C16—H16C | 0.9600 |
| C6—C11 | 1.401 (4) | C17—H17A | 0.9600 |
| C7—C8 | 1.395 (5) | C17—H17B | 0.9600 |
| C7—H7 | 0.9300 | C17—H17C | 0.9600 |
| C8—C9 | 1.363 (5) | C18—O5 | 1.225 (3) |
| C8—H8 | 0.9300 | C18—O4 | 1.338 (3) |
| C9—C10 | 1.387 (5) | C19—O4 | 1.438 (4) |
| C9—H9 | 0.9300 | C19—C20 | 1.451 (6) |
| C10—C11 | 1.389 (4) | C19—H19A | 0.9700 |
| C10—H10 | 0.9300 | C19—H19B | 0.9700 |
| C11—O1 | 1.374 (3) | C20—H20A | 0.9600 |
| C12—O1 | 1.422 (4) | C20—H20B | 0.9600 |
| C12—H12A | 0.9600 | C20—H20C | 0.9600 |
| C12—H12B | 0.9600 | N1—H1A | 0.8600 |
| C2—C1—C5 | 111.2 (2) | O2—C14—C15 | 107.2 (3) |
| C2—C1—C6 | 113.1 (2) | O2—C14—H14A | 110.3 |
| C5—C1—C6 | 112.0 (2) | C15—C14—H14A | 110.3 |
| C2—C1—H1 | 106.7 | O2—C14—H14B | 110.3 |
| C5—C1—H1 | 106.7 | C15—C14—H14B | 110.3 |
| C6—C1—H1 | 106.7 | H14A—C14—H14B | 108.5 |
| C3—C2—C13 | 121.1 (2) | C14—C15—H15A | 109.5 |
| C3—C2—C1 | 121.5 (2) | C14—C15—H15B | 109.5 |
| C13—C2—C1 | 117.4 (2) | H15A—C15—H15B | 109.5 |
| C2—C3—N1 | 119.1 (3) | C14—C15—H15C | 109.5 |
| C2—C3—C16 | 127.8 (3) | H15A—C15—H15C | 109.5 |
| N1—C3—C16 | 113.1 (3) | H15B—C15—H15C | 109.5 |
| C5—C4—N1 | 119.6 (2) | C3—C16—H16A | 109.5 |
| C5—C4—C17 | 127.4 (3) | C3—C16—H16B | 109.5 |
| N1—C4—C17 | 113.0 (2) | H16A—C16—H16B | 109.5 |
| C4—C5—C18 | 121.2 (2) | C3—C16—H16C | 109.5 |
| C4—C5—C1 | 120.5 (2) | H16A—C16—H16C | 109.5 |
| C18—C5—C1 | 118.3 (2) | H16B—C16—H16C | 109.5 |
| C7—C6—C11 | 116.8 (3) | C4—C17—H17A | 109.5 |
| C7—C6—C1 | 120.1 (3) | C4—C17—H17B | 109.5 |
| C11—C6—C1 | 123.1 (2) | H17A—C17—H17B | 109.5 |
| C6—C7—C8 | 122.0 (3) | C4—C17—H17C | 109.5 |
| C6—C7—H7 | 119.0 | H17A—C17—H17C | 109.5 |
| C8—C7—H7 | 119.0 | H17B—C17—H17C | 109.5 |
| C9—C8—C7 | 119.8 (3) | O5—C18—O4 | 121.1 (3) |
| C9—C8—H8 | 120.1 | O5—C18—C5 | 127.1 (3) |
| C7—C8—H8 | 120.1 | O4—C18—C5 | 111.8 (2) |
| C8—C9—C10 | 120.3 (3) | O4—C19—C20 | 107.8 (3) |
| C8—C9—H9 | 119.9 | O4—C19—H19A | 110.1 |
| C10—C9—H9 | 119.9 | C20—C19—H19A | 110.1 |
| C9—C10—C11 | 119.3 (3) | O4—C19—H19B | 110.1 |
| C9—C10—H10 | 120.3 | C20—C19—H19B | 110.1 |
| C11—C10—H10 | 120.3 | H19A—C19—H19B | 108.5 |
| O1—C11—C10 | 122.9 (3) | C19—C20—H20A | 109.5 |
| O1—C11—C6 | 115.4 (2) | C19—C20—H20B | 109.5 |
| C10—C11—C6 | 121.7 (3) | H20A—C20—H20B | 109.5 |
| O1—C12—H12A | 109.5 | C19—C20—H20C | 109.5 |
| O1—C12—H12B | 109.5 | H20A—C20—H20C | 109.5 |
| H12A—C12—H12B | 109.5 | H20B—C20—H20C | 109.5 |
| O1—C12—H12C | 109.5 | C4—N1—C3 | 124.0 (2) |
| H12A—C12—H12C | 109.5 | C4—N1—H1A | 118.0 |
| H12B—C12—H12C | 109.5 | C3—N1—H1A | 118.0 |
| O3—C13—O2 | 121.3 (3) | C11—O1—C12 | 118.7 (3) |
| O3—C13—C2 | 127.7 (3) | C13—O2—C14 | 117.5 (2) |
| O2—C13—C2 | 111.0 (2) | C18—O4—C19 | 117.5 (3) |
| C5—C1—C2—C3 | 19.7 (4) | C9—C10—C11—C6 | 1.9 (5) |
| C6—C1—C2—C3 | −107.3 (3) | C7—C6—C11—O1 | −180.0 (2) |
| C5—C1—C2—C13 | −161.9 (2) | C1—C6—C11—O1 | −0.9 (4) |
| C6—C1—C2—C13 | 71.1 (3) | C7—C6—C11—C10 | −2.2 (4) |
| C13—C2—C3—N1 | 176.3 (3) | C1—C6—C11—C10 | 176.8 (3) |
| C1—C2—C3—N1 | −5.4 (4) | C3—C2—C13—O3 | 7.5 (5) |
| C13—C2—C3—C16 | −1.2 (5) | C1—C2—C13—O3 | −171.0 (3) |
| C1—C2—C3—C16 | 177.1 (3) | C3—C2—C13—O2 | −173.4 (3) |
| N1—C4—C5—C18 | −172.1 (2) | C1—C2—C13—O2 | 8.2 (3) |
| C17—C4—C5—C18 | 7.1 (4) | C4—C5—C18—O5 | −9.0 (4) |
| N1—C4—C5—C1 | 7.3 (4) | C1—C5—C18—O5 | 171.6 (3) |
| C17—C4—C5—C1 | −173.4 (3) | C4—C5—C18—O4 | 170.5 (3) |
| C2—C1—C5—C4 | −20.6 (3) | C1—C5—C18—O4 | −8.9 (3) |
| C6—C1—C5—C4 | 107.0 (3) | C5—C4—N1—C3 | 9.9 (4) |
| C2—C1—C5—C18 | 158.8 (2) | C17—C4—N1—C3 | −169.4 (3) |
| C6—C1—C5—C18 | −73.5 (3) | C2—C3—N1—C4 | −11.0 (4) |
| C2—C1—C6—C7 | −119.7 (3) | C16—C3—N1—C4 | 166.8 (3) |
| C5—C1—C6—C7 | 113.7 (3) | C10—C11—O1—C12 | 8.5 (4) |
| C2—C1—C6—C11 | 61.3 (3) | C6—C11—O1—C12 | −173.8 (3) |
| C5—C1—C6—C11 | −65.3 (3) | O3—C13—O2—C14 | 2.1 (4) |
| C11—C6—C7—C8 | 0.5 (4) | C2—C13—O2—C14 | −177.1 (2) |
| C1—C6—C7—C8 | −178.5 (3) | C15—C14—O2—C13 | −177.1 (3) |
| C6—C7—C8—C9 | 1.5 (5) | O5—C18—O4—C19 | 3.7 (4) |
| C7—C8—C9—C10 | −1.9 (6) | C5—C18—O4—C19 | −175.9 (3) |
| C8—C9—C10—C11 | 0.2 (5) | C20—C19—O4—C18 | −169.0 (4) |
| C9—C10—C11—O1 | 179.5 (3) |
| H··· | ||||
| N1—H1 | 0.86 | 2.07 | 2.924 (3) | 170 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.07 | 2.924 (3) | 170 |
Symmetry code: (i) .