Literature DB >> 23723905

2-({1-[2-(Methyl-sulfan-yl)phen-yl]-1H-tetra-zol-5-yl}sulfan-yl)acetic acid.

Ana C Mafud1, Yvonne P Mascarenhas, Alessandro S Nascimento.   

Abstract

In the title compound, C10H10N4O2S2, the tetra-zole and benzene rings are almost normal to one another, with a dihedral angle between their planes of 84.33 (9)°. In the crystal, mol-ecules are linked via pairs of bifurcated O-H⋯(N,N) hydrogen bonds, forming inversion dimers with graph-set motif R 4 (4)(12). The dimers are linked by significant π-π inter-actions involving inversion-related tetra-zole rings and inversion-related benzene rings, with centroid-centroid distances of 3.7376 (14) and 3.8444 (15) Å, respectively.

Entities:  

Year:  2013        PMID: 23723905      PMCID: PMC3648285          DOI: 10.1107/S160053681300980X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the ZINC database, see: Irwin et al. (2012 ▶). For information on the biological properties of tetra­zoles, see: Kees et al. (1989 ▶); Nolte et al. (1998 ▶); Mafud & Nascimento (2013 ▶).

Experimental

Crystal data

C10H10N4O2S2 M = 282.34 Triclinic, a = 7.1500 (3) Å b = 8.3770 (3) Å c = 11.0890 (5) Å α = 74.7480 (14)° β = 79.3090 (14)° γ = 86.286 (3)° V = 629.58 (4) Å3 Z = 2 Mo Kα radiation μ = 0.42 mm−1 T = 290 K 0.1 × 0.05 × 0.05 mm

Data collection

Bruker–Nonius KappaCCD diffractometer Absorption correction: for a cylinder mounted on the ϕ axis (Dwiggins, 1975 ▶) T min = 0.861, T max = 0.862 15888 measured reflections 2335 independent reflections 1879 reflections with I > 2σ(I) R int = 0.079

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.15 S = 1.04 2335 reflections 167 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.50 e Å−3 Δρmin = −0.30 e Å−3 Data collection: COLLECT (Nonius, 1999 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO (Otwinowski & Minor, 1997 ▶) and SCALEPACK; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681300980X/su2571sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681300980X/su2571Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S160053681300980X/su2571Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H10N4O2S2Z = 2
Mr = 282.34F(000) = 292
Triclinic, P1none
Hall symbol: -P 1Dx = 1.489 Mg m3
a = 7.1500 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.3770 (3) ÅCell parameters from 2086 reflections
c = 11.0890 (5) Åθ = 10.4–19.8°
α = 74.7480 (14)°µ = 0.42 mm1
β = 79.3090 (14)°T = 290 K
γ = 86.286 (3)°Prism, yellow
V = 629.58 (4) Å30.1 × 0.05 × 0.05 mm
Bruker–Nonius KappaCCD diffractometer2335 independent reflections
Radiation source: Fine-focus1879 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.079
CCD scansθmax = 25.7°, θmin = 3.8°
Absorption correction: for a cylinder mounted on the φ axis (Dwiggins, 1975)h = −8→8
Tmin = 0.861, Tmax = 0.862k = −10→10
15888 measured reflectionsl = −13→13
Refinement on F20 restraints
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.051w = 1/[σ2(Fo2) + (0.0968P)2 + 0.1021P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.15(Δ/σ)max < 0.001
S = 1.04Δρmax = 0.50 e Å3
2335 reflectionsΔρmin = −0.30 e Å3
167 parameters
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individuallno in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are onlno used when theno are defined bno crnostal snommetrno. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
S10.12427 (8)0.32835 (9)0.14822 (6)0.0644 (3)
S20.31586 (12)0.16473 (8)0.46904 (6)0.0744 (3)
O10.3263 (3)0.0525 (3)−0.07328 (19)0.0753 (6)
H10.367 (6)−0.039 (5)−0.072 (4)0.113*
O20.1581 (4)−0.0338 (3)0.1185 (2)0.0973 (8)
N10.5089 (3)0.2791 (3)0.0763 (2)0.0593 (5)
N20.6701 (3)0.3173 (3)0.1112 (2)0.0621 (5)
N30.6313 (3)0.3917 (3)0.2004 (2)0.0593 (5)
N40.4384 (2)0.4047 (2)0.22640 (17)0.0490 (4)
C10.2079 (3)0.0747 (3)0.0282 (2)0.0576 (6)
C20.1398 (3)0.2518 (3)0.0096 (2)0.0546 (5)
H2A0.01530.2615−0.01480.066*
H2B0.22610.3207−0.05970.066*
C30.3657 (3)0.3352 (3)0.1496 (2)0.0507 (5)
C40.3483 (3)0.4803 (3)0.3259 (2)0.0497 (5)
C50.3341 (4)0.6503 (3)0.2979 (2)0.0597 (6)
H50.37230.71380.21530.072*
C60.2621 (4)0.7248 (4)0.3944 (3)0.0721 (7)
H60.24890.83940.37740.087*
C70.2099 (4)0.6277 (4)0.5165 (3)0.0736 (8)
H70.16450.67820.58170.088*
C80.2235 (4)0.4586 (4)0.5438 (2)0.0637 (6)
H80.18660.3960.62670.076*
C90.2925 (3)0.3800 (3)0.4476 (2)0.0539 (5)
C100.2427 (5)0.0824 (4)0.6350 (3)0.0923 (10)
H10A0.32740.11850.680.138*
H10B0.2456−0.03630.65440.138*
H10C0.11560.12040.66040.138*
U11U22U33U12U13U23
S10.0435 (4)0.0871 (5)0.0716 (5)−0.0001 (3)−0.0027 (3)−0.0413 (4)
S20.0991 (6)0.0597 (4)0.0580 (4)−0.0016 (3)−0.0056 (3)−0.0094 (3)
O10.0897 (14)0.0694 (12)0.0682 (12)0.0092 (10)−0.0035 (10)−0.0296 (10)
O20.1136 (18)0.0716 (13)0.0805 (14)0.0116 (12)0.0131 (12)0.0020 (11)
N10.0483 (10)0.0683 (12)0.0648 (12)−0.0004 (9)0.0007 (8)−0.0307 (10)
N20.0473 (10)0.0726 (13)0.0670 (13)0.0032 (9)−0.0015 (9)−0.0260 (11)
N30.0434 (10)0.0711 (13)0.0628 (12)0.0002 (8)−0.0052 (8)−0.0192 (10)
N40.0425 (9)0.0543 (10)0.0501 (10)0.0014 (7)−0.0045 (7)−0.0163 (8)
C10.0544 (12)0.0648 (14)0.0558 (14)−0.0015 (10)−0.0109 (10)−0.0186 (11)
C20.0496 (12)0.0600 (13)0.0571 (13)−0.0012 (10)−0.0111 (10)−0.0188 (11)
C30.0475 (11)0.0545 (12)0.0522 (12)0.0008 (9)−0.0048 (9)−0.0205 (10)
C40.0460 (11)0.0569 (12)0.0506 (12)0.0024 (9)−0.0103 (9)−0.0206 (10)
C50.0611 (14)0.0563 (14)0.0640 (14)0.0032 (10)−0.0140 (11)−0.0184 (11)
C60.0711 (16)0.0646 (16)0.094 (2)0.0088 (12)−0.0231 (14)−0.0392 (15)
C70.0624 (15)0.095 (2)0.0812 (19)0.0070 (14)−0.0154 (13)−0.0530 (17)
C80.0594 (14)0.0837 (18)0.0538 (13)0.0016 (12)−0.0090 (10)−0.0289 (12)
C90.0481 (11)0.0649 (14)0.0514 (12)0.0001 (10)−0.0096 (9)−0.0193 (10)
C100.096 (2)0.093 (2)0.0671 (18)0.0006 (17)−0.0007 (15)0.0068 (16)
S1—C31.734 (2)C2—H2B0.97
S1—C21.798 (2)C4—C51.376 (3)
S2—C91.757 (3)C4—C91.391 (3)
S2—C101.778 (3)C5—C61.381 (4)
O1—C11.324 (3)C5—H50.93
O1—H10.80 (4)C6—C71.380 (4)
O2—C11.177 (3)C6—H60.93
N1—C31.327 (3)C7—C81.369 (4)
N1—N21.364 (3)C7—H70.93
N2—N31.282 (3)C8—C91.395 (3)
N3—N41.359 (3)C8—H80.93
N4—C31.341 (3)C10—H10A0.96
N4—C41.444 (3)C10—H10B0.96
C1—C21.504 (3)C10—H10C0.96
C2—H2A0.97
C3—S1—C298.45 (10)C9—C4—N4118.91 (19)
C9—S2—C10104.17 (14)C4—C5—C6118.8 (2)
C1—O1—H1118 (3)C4—C5—H5120.6
C3—N1—N2105.52 (19)C6—C5—H5120.6
N3—N2—N1111.51 (18)C7—C6—C5119.3 (3)
N2—N3—N4106.22 (18)C7—C6—H6120.3
C3—N4—N3108.48 (17)C5—C6—H6120.3
C3—N4—C4131.62 (18)C8—C7—C6121.6 (2)
N3—N4—C4119.88 (18)C8—C7—H7119.2
O2—C1—O1123.2 (2)C6—C7—H7119.2
O2—C1—C2125.3 (2)C7—C8—C9120.2 (2)
O1—C1—C2111.4 (2)C7—C8—H8119.9
C1—C2—S1113.73 (17)C9—C8—H8119.9
C1—C2—H2A108.8C4—C9—C8117.2 (2)
S1—C2—H2A108.8C4—C9—S2117.76 (17)
C1—C2—H2B108.8C8—C9—S2125.01 (19)
S1—C2—H2B108.8S2—C10—H10A109.5
H2A—C2—H2B107.7S2—C10—H10B109.5
N1—C3—N4108.27 (19)H10A—C10—H10B109.5
N1—C3—S1127.70 (17)S2—C10—H10C109.5
N4—C3—S1124.01 (16)H10A—C10—H10C109.5
C5—C4—C9122.8 (2)H10B—C10—H10C109.5
C5—C4—N4118.2 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1···N1i0.81 (4)2.15 (4)2.952 (4)176 (4)
O1—H1···N2i0.81 (4)2.51 (4)3.232 (4)149 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯N1i 0.81 (4)2.15 (4)2.952 (4)176 (4)
O1—H1⋯N2i 0.81 (4)2.51 (4)3.232 (4)149 (4)

Symmetry code: (i) .

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