Literature DB >> 23723904

3-[(1-Bromo-naphthalen-2-yl)meth-oxy]-5,5-di-methyl-cyclo-hex-2-enone.

Liang-Liang Fang1, Nan Liu, Xin-Ying Zhang.   

Abstract

In the title compound, C19H19BrO2, the cyclo-hexenone ring adopts an envelope conformation with the C atom bearing the methyl substituents as the flap. In the crystal, weak π-π stacking is observed between parallel aromatic rings of adjacent mol-ecules, the centroid-centroid distance being 3.694 (6) Å. The entire bromonaphthylmethyl unit is disordered over two orientations, with a site-occupancy ratio of 0.5214 (19):0.4786 (19).

Entities:  

Year:  2013        PMID: 23723904      PMCID: PMC3648284          DOI: 10.1107/S160053681301026X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity and applications of cyclo­hex-2-enone derivatives, see: Aghil et al. (1992 ▶); Correcia et al. (2001 ▶); Ghorab et al. (2011 ▶).

Experimental

Crystal data

C19H19BrO2 M = 359.25 Monoclinic, a = 13.986 (3) Å b = 9.9970 (18) Å c = 11.859 (2) Å β = 91.169 (2)° V = 1657.8 (5) Å3 Z = 4 Mo Kα radiation μ = 2.48 mm−1 T = 296 K 0.32 × 0.29 × 0.27 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.504, T max = 0.554 11934 measured reflections 3075 independent reflections 1931 reflections with I > 2σ(I) R int = 0.074

Refinement

R[F 2 > 2σ(F 2)] = 0.061 wR(F 2) = 0.199 S = 1.07 3075 reflections 222 parameters 72 restraints H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.20 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681301026X/xu5694sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681301026X/xu5694Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S160053681301026X/xu5694Isup3.cdx Click here for additional data file. Supplementary material file. DOI: 10.1107/S160053681301026X/xu5694Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H19BrO2F(000) = 736
Mr = 359.25Dx = 1.439 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2538 reflections
a = 13.986 (3) Åθ = 2.5–20.6°
b = 9.9970 (18) ŵ = 2.48 mm1
c = 11.859 (2) ÅT = 296 K
β = 91.169 (2)°Block, colourless
V = 1657.8 (5) Å30.32 × 0.29 × 0.27 mm
Z = 4
Bruker SMART 1000 CCD area-detector diffractometer3075 independent reflections
Radiation source: fine-focus sealed tube1931 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.074
phi and ω scansθmax = 25.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −16→16
Tmin = 0.504, Tmax = 0.554k = −12→12
11934 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.061Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.199H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0635P)2 + 1.8223P] where P = (Fo2 + 2Fc2)/3
3075 reflections(Δ/σ)max < 0.001
222 parametersΔρmax = 0.26 e Å3
72 restraintsΔρmin = −0.20 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Br10.93272 (9)0.21923 (16)0.49100 (14)0.0729 (5)0.5214 (19)
C90.8583 (5)0.0318 (10)0.6902 (8)0.0531 (17)0.5214 (19)
H9A0.83280.01220.61530.064*0.5214 (19)
H9B0.8464−0.04480.73810.064*0.5214 (19)
C101.1164 (5)0.0103 (9)0.7741 (7)0.0667 (19)0.5214 (19)
H101.1523−0.03160.83070.080*0.5214 (19)
C111.0182 (6)−0.0061 (16)0.7684 (11)0.082 (4)0.5214 (19)
H110.9881−0.05990.82080.098*0.5214 (19)
C120.9649 (5)0.0574 (9)0.6848 (7)0.057 (2)0.5214 (19)
C131.0089 (4)0.1363 (8)0.6063 (6)0.0555 (17)0.5214 (19)
C141.1077 (4)0.1516 (9)0.6101 (7)0.068 (3)0.5214 (19)
C151.1529 (4)0.2292 (9)0.5302 (7)0.076 (3)0.5214 (19)
H151.11710.27070.47330.092*0.5214 (19)
C161.2513 (5)0.2448 (9)0.5352 (7)0.073 (3)0.5214 (19)
H161.28160.29680.48160.087*0.5214 (19)
C171.3047 (5)0.1829 (8)0.6201 (7)0.068 (3)0.5214 (19)
H171.37070.19340.62340.081*0.5214 (19)
C181.2595 (4)0.1054 (9)0.7000 (7)0.070 (2)0.5214 (19)
H181.29530.06380.75690.085*0.5214 (19)
C191.1611 (4)0.0897 (9)0.6950 (6)0.068 (3)0.5214 (19)
C9'0.8450 (6)0.0553 (11)0.6468 (9)0.0531 (17)0.4786 (19)
H9'10.80380.05950.58000.064*0.4786 (19)
H9'20.8458−0.03590.67480.064*0.4786 (19)
C10'1.0349 (5)0.2273 (10)0.4867 (7)0.0667 (19)0.4786 (19)
H10'1.03680.27770.42090.080*0.4786 (19)
C11'0.9485 (6)0.1796 (18)0.5240 (12)0.082 (4)0.4786 (19)
H11'0.89230.19960.48420.098*0.4786 (19)
C12'0.9454 (5)0.1022 (10)0.6205 (7)0.057 (2)0.4786 (19)
C13'1.0287 (5)0.0714 (9)0.6786 (7)0.0555 (17)0.4786 (19)
C14'1.1158 (4)0.1209 (10)0.6427 (7)0.068 (3)0.4786 (19)
C15'1.2003 (5)0.0901 (10)0.7016 (8)0.076 (3)0.4786 (19)
H15'1.19860.03690.76580.092*0.4786 (19)
C16'1.2875 (6)0.1393 (10)0.6641 (9)0.073 (3)0.4786 (19)
H16'1.34380.11880.70340.087*0.4786 (19)
C17'1.2901 (6)0.2191 (10)0.5678 (8)0.068 (3)0.4786 (19)
H17'1.34820.25190.54280.081*0.4786 (19)
C18'1.2056 (5)0.2498 (9)0.5089 (7)0.070 (2)0.4786 (19)
H18'1.20730.30310.44460.085*0.4786 (19)
C19'1.1184 (4)0.2007 (9)0.5463 (7)0.068 (3)0.4786 (19)
Br1'1.02132 (16)−0.0384 (2)0.80852 (18)0.1011 (8)0.4786 (19)
C10.7221 (3)0.1315 (4)0.7734 (3)0.0451 (10)
C20.6685 (3)0.0219 (5)0.7571 (4)0.0515 (11)
H20.6915−0.04920.71490.062*
C30.5733 (3)0.0146 (5)0.8065 (4)0.0525 (11)
C40.5388 (3)0.1316 (5)0.8710 (4)0.0531 (11)
H4A0.49620.10010.92880.064*
H4B0.50200.18880.82040.064*
C50.6191 (3)0.2159 (4)0.9280 (3)0.0471 (10)
C60.6897 (3)0.2516 (4)0.8369 (4)0.0465 (10)
H6A0.65980.31430.78460.056*
H6B0.74480.29540.87140.056*
C70.6693 (4)0.1348 (6)1.0219 (4)0.0652 (14)
H7A0.71860.18821.05690.098*
H7B0.69720.05580.99020.098*
H7C0.62350.10951.07720.098*
C80.5763 (4)0.3438 (6)0.9770 (5)0.0684 (14)
H8A0.62630.39701.01070.103*
H8B0.53070.32071.03320.103*
H8C0.54500.39380.91780.103*
O10.8111 (2)0.1500 (3)0.7355 (3)0.0642 (10)
O20.5246 (3)−0.0871 (4)0.7946 (3)0.0814 (12)
U11U22U33U12U13U23
Br10.0660 (7)0.0816 (11)0.0705 (9)0.0125 (6)−0.0091 (5)−0.0032 (7)
C90.0528 (19)0.0533 (19)0.053 (2)0.0011 (10)0.0026 (10)−0.0008 (10)
C100.073 (5)0.065 (5)0.061 (4)0.008 (4)0.007 (4)0.009 (4)
C110.102 (8)0.075 (9)0.068 (9)0.010 (6)−0.003 (6)0.013 (6)
C120.063 (5)0.051 (5)0.060 (6)0.007 (4)0.011 (5)−0.017 (4)
C130.040 (4)0.062 (5)0.065 (5)0.001 (3)0.007 (4)−0.006 (3)
C140.052 (3)0.067 (6)0.084 (7)−0.003 (3)0.014 (4)−0.024 (5)
C150.055 (7)0.079 (6)0.096 (7)−0.010 (5)0.012 (5)−0.004 (5)
C160.059 (5)0.063 (6)0.096 (7)0.013 (4)−0.012 (4)−0.004 (5)
C170.044 (4)0.067 (6)0.093 (9)−0.002 (4)0.009 (5)0.008 (6)
C180.075 (7)0.060 (5)0.077 (6)−0.001 (5)0.008 (5)0.001 (4)
C190.050 (5)0.059 (5)0.097 (7)0.004 (4)0.009 (5)−0.021 (5)
C9'0.0528 (19)0.0533 (19)0.053 (2)0.0011 (10)0.0026 (10)−0.0008 (10)
C10'0.073 (5)0.065 (5)0.061 (4)0.008 (4)0.007 (4)0.009 (4)
C11'0.102 (8)0.075 (9)0.068 (9)0.010 (6)−0.003 (6)0.013 (6)
C12'0.063 (5)0.051 (5)0.060 (6)0.007 (4)0.011 (5)−0.017 (4)
C13'0.040 (4)0.062 (5)0.065 (5)0.001 (3)0.007 (4)−0.006 (3)
C14'0.052 (3)0.067 (6)0.084 (7)−0.003 (3)0.014 (4)−0.024 (5)
C15'0.055 (7)0.079 (6)0.096 (7)−0.010 (5)0.012 (5)−0.004 (5)
C16'0.059 (5)0.063 (6)0.096 (7)0.013 (4)−0.012 (4)−0.004 (5)
C17'0.044 (4)0.067 (6)0.093 (9)−0.002 (4)0.009 (5)0.008 (6)
C18'0.075 (7)0.060 (5)0.077 (6)−0.001 (5)0.008 (5)0.001 (4)
C19'0.050 (5)0.059 (5)0.097 (7)0.004 (4)0.009 (5)−0.021 (5)
Br1'0.1561 (17)0.0705 (11)0.0769 (14)−0.0061 (9)0.0059 (10)0.0235 (9)
C10.043 (2)0.050 (3)0.042 (2)0.0009 (19)0.0091 (18)0.0007 (19)
C20.051 (3)0.054 (3)0.050 (2)−0.008 (2)0.008 (2)−0.009 (2)
C30.053 (3)0.062 (3)0.042 (2)−0.017 (2)−0.001 (2)0.002 (2)
C40.042 (2)0.064 (3)0.053 (3)−0.006 (2)0.006 (2)0.001 (2)
C50.041 (2)0.057 (3)0.043 (2)−0.003 (2)0.0087 (18)−0.001 (2)
C60.045 (2)0.051 (3)0.044 (2)−0.0027 (19)0.0065 (18)0.0026 (19)
C70.072 (3)0.087 (4)0.037 (2)−0.014 (3)0.001 (2)0.010 (2)
C80.063 (3)0.073 (3)0.070 (3)−0.004 (3)0.015 (3)−0.017 (3)
O10.0533 (19)0.059 (2)0.081 (2)−0.0126 (15)0.0272 (17)−0.0207 (18)
O20.069 (2)0.083 (3)0.093 (3)−0.035 (2)0.018 (2)−0.018 (2)
Br1—C131.907 (6)C13'—Br1'1.897 (7)
C9—O11.461 (10)C14'—C15'1.395 (5)
C9—C121.515 (8)C14'—C19'1.395 (5)
C9—H9A0.9700C15'—C16'1.395 (5)
C9—H9B0.9700C15'—H15'0.9300
C10—C111.383 (6)C16'—C17'1.395 (5)
C10—C191.387 (6)C16'—H16'0.9300
C10—H100.9300C17'—C18'1.395 (5)
C11—C121.382 (6)C17'—H17'0.9300
C11—H110.9300C18'—C19'1.395 (5)
C12—C131.376 (6)C18'—H18'0.9300
C13—C141.390 (6)C1—C21.339 (6)
C14—C191.386 (5)C1—O11.345 (5)
C14—C151.386 (5)C1—C61.493 (6)
C15—C161.386 (5)C2—C31.467 (6)
C15—H150.9300C2—H20.9300
C16—C171.386 (5)C3—O21.231 (6)
C16—H160.9300C3—C41.483 (7)
C17—C181.386 (5)C4—C51.548 (6)
C17—H170.9300C4—H4A0.9700
C18—C191.386 (5)C4—H4B0.9700
C18—H180.9300C5—C61.520 (6)
C9'—O11.499 (11)C5—C81.531 (7)
C9'—C12'1.519 (9)C5—C71.536 (6)
C9'—H9'10.9700C6—H6A0.9700
C9'—H9'20.9700C6—H6B0.9700
C10'—C19'1.379 (7)C7—H7A0.9600
C10'—C11'1.380 (6)C7—H7B0.9600
C10'—H10'0.9300C7—H7C0.9600
C11'—C12'1.383 (6)C8—H8A0.9600
C11'—H11'0.9300C8—H8B0.9600
C12'—C13'1.377 (6)C8—H8C0.9600
C13'—C14'1.389 (7)
O1—C9—C12109.3 (7)C14'—C15'—C16'120.0
O1—C9—H9A109.8C14'—C15'—H15'120.0
C12—C9—H9A109.8C16'—C15'—H15'120.0
O1—C9—H9B109.8C15'—C16'—C17'120.0
C12—C9—H9B109.8C15'—C16'—H16'120.0
H9A—C9—H9B108.3C17'—C16'—H16'120.0
C11—C10—C19119.7 (4)C18'—C17'—C16'120.0
C11—C10—H10120.2C18'—C17'—H17'120.0
C19—C10—H10120.2C16'—C17'—H17'120.0
C12—C11—C10120.1 (4)C17'—C18'—C19'120.0
C12—C11—H11120.0C17'—C18'—H18'120.0
C10—C11—H11120.0C19'—C18'—H18'120.0
C13—C12—C11120.4 (4)C10'—C19'—C18'120.4 (4)
C13—C12—C9125.5 (6)C10'—C19'—C14'119.6 (4)
C11—C12—C9114.2 (6)C18'—C19'—C14'120.0
C12—C13—C14120.0 (4)C2—C1—O1125.7 (4)
C12—C13—Br1118.9 (4)C2—C1—C6123.7 (4)
C14—C13—Br1121.1 (4)O1—C1—C6110.6 (4)
C19—C14—C15120.0C1—C2—C3119.5 (4)
C19—C14—C13119.6 (3)C1—C2—H2120.2
C15—C14—C13120.4 (3)C3—C2—H2120.2
C16—C15—C14120.0O2—C3—C2120.0 (4)
C16—C15—H15120.0O2—C3—C4121.7 (4)
C14—C15—H15120.0C2—C3—C4118.3 (4)
C17—C16—C15120.0C3—C4—C5114.4 (4)
C17—C16—H16120.0C3—C4—H4A108.7
C15—C16—H16120.0C5—C4—H4A108.7
C16—C17—C18120.0C3—C4—H4B108.7
C16—C17—H17120.0C5—C4—H4B108.7
C18—C17—H17120.0H4A—C4—H4B107.6
C17—C18—C19120.0C6—C5—C8109.8 (4)
C17—C18—H18120.0C6—C5—C7110.2 (4)
C19—C18—H18120.0C8—C5—C7110.0 (4)
C14—C19—C18120.0C6—C5—C4107.1 (3)
C14—C19—C10120.2 (3)C8—C5—C4109.5 (4)
C18—C19—C10119.8 (3)C7—C5—C4110.2 (4)
O1—C9'—C12'104.8 (7)C1—C6—C5112.2 (3)
O1—C9'—H9'1110.8C1—C6—H6A109.2
C12'—C9'—H9'1110.8C5—C6—H6A109.2
O1—C9'—H9'2110.8C1—C6—H6B109.2
C12'—C9'—H9'2110.8C5—C6—H6B109.2
H9'1—C9'—H9'2108.9H6A—C6—H6B107.9
C19'—C10'—C11'120.5 (4)C5—C7—H7A109.5
C19'—C10'—H10'119.8C5—C7—H7B109.5
C11'—C10'—H10'119.8H7A—C7—H7B109.5
C10'—C11'—C12'120.1 (4)C5—C7—H7C109.5
C10'—C11'—H11'120.0H7A—C7—H7C109.5
C12'—C11'—H11'120.0H7B—C7—H7C109.5
C13'—C12'—C11'119.9 (4)C5—C8—H8A109.5
C13'—C12'—C9'127.3 (7)C5—C8—H8B109.5
C11'—C12'—C9'112.8 (7)H8A—C8—H8B109.5
C12'—C13'—C14'120.4 (4)C5—C8—H8C109.5
C12'—C13'—Br1'118.4 (4)H8A—C8—H8C109.5
C14'—C13'—Br1'121.2 (4)H8B—C8—H8C109.5
C13'—C14'—C15'120.5 (4)C1—O1—C9116.1 (4)
C13'—C14'—C19'119.5 (4)C1—O1—C9'117.1 (4)
C15'—C14'—C19'120.0C9—O1—C9'23.1 (5)
C19—C10—C11—C12−1 (2)C12'—C13'—C14'—C19'−0.8 (14)
C10—C11—C12—C131 (2)Br1'—C13'—C14'—C19'179.6 (6)
C10—C11—C12—C9−179.1 (13)C13'—C14'—C15'—C16'179.4 (11)
O1—C9—C12—C13−75.3 (11)C19'—C14'—C15'—C16'0.0
O1—C9—C12—C11104.4 (12)C14'—C15'—C16'—C17'0.0
C11—C12—C13—C140.6 (17)C15'—C16'—C17'—C18'0.0
C9—C12—C13—C14−179.8 (9)C16'—C17'—C18'—C19'0.0
C11—C12—C13—Br1178.9 (11)C11'—C10'—C19'—C18'−179.5 (12)
C9—C12—C13—Br1−1.5 (13)C11'—C10'—C19'—C14'2.4 (17)
C12—C13—C14—C19−1.6 (12)C17'—C18'—C19'—C10'−178.1 (10)
Br1—C13—C14—C19−179.8 (5)C17'—C18'—C19'—C14'0.0
C12—C13—C14—C15178.9 (7)C13'—C14'—C19'—C10'−1.3 (11)
Br1—C13—C14—C150.7 (11)C15'—C14'—C19'—C10'178.1 (10)
C19—C14—C15—C160.0C13'—C14'—C19'—C18'−179.4 (11)
C13—C14—C15—C16179.5 (10)C15'—C14'—C19'—C18'0.0
C14—C15—C16—C170.0O1—C1—C2—C3178.3 (4)
C15—C16—C17—C180.0C6—C1—C2—C3−2.0 (7)
C16—C17—C18—C190.0C1—C2—C3—O2−178.0 (5)
C15—C14—C19—C180.0C1—C2—C3—C41.4 (7)
C13—C14—C19—C18−179.5 (10)O2—C3—C4—C5151.0 (4)
C15—C14—C19—C10−179.0 (10)C2—C3—C4—C5−28.4 (6)
C13—C14—C19—C101.5 (10)C3—C4—C5—C652.9 (5)
C17—C18—C19—C140.0C3—C4—C5—C8171.8 (4)
C17—C18—C19—C10179.0 (9)C3—C4—C5—C7−67.0 (5)
C11—C10—C19—C14−0.4 (15)C2—C1—C6—C529.6 (6)
C11—C10—C19—C18−179.4 (11)O1—C1—C6—C5−150.7 (4)
C19'—C10'—C11'—C12'−1 (2)C8—C5—C6—C1−170.9 (4)
C10'—C11'—C12'—C13'−1 (2)C7—C5—C6—C167.8 (5)
C10'—C11'—C12'—C9'−178.3 (14)C4—C5—C6—C1−52.1 (5)
O1—C9'—C12'—C13'83.4 (12)C2—C1—O1—C9−11.2 (7)
O1—C9'—C12'—C11'−99.3 (13)C6—C1—O1—C9169.1 (5)
C11'—C12'—C13'—C14'1.8 (18)C2—C1—O1—C9'14.7 (8)
C9'—C12'—C13'—C14'178.9 (10)C6—C1—O1—C9'−165.1 (6)
C11'—C12'—C13'—Br1'−178.6 (12)C12—C9—O1—C1−162.9 (5)
C9'—C12'—C13'—Br1'−1.5 (15)C12—C9—O1—C9'98.9 (13)
C12'—C13'—C14'—C15'179.8 (8)C12'—C9'—O1—C1179.2 (6)
Br1'—C13'—C14'—C15'0.2 (12)C12'—C9'—O1—C9−87.4 (13)
  3 in total

1.  Alkyl phenols and derivatives from Tapirira obtusa.

Authors:  S D Correia; J M David; J P David; H B Chai; J M Pezzuto; G A Cordell
Journal:  Phytochemistry       Date:  2001-04       Impact factor: 4.072

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and cytotoxicity of shikimate analogues. Structure:activity studies based on 1-crotonyloxymethyl-3R,4R,5R-trihydroxycyclohex-2-enone.

Authors:  O Aghil; M C Bibby; S J Carrington; J Double; K T Douglas; R M Phillips; T K Shing
Journal:  Anticancer Drug Des       Date:  1992-02
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.