Literature DB >> 23723900

2-Methyl-4-(4-methyl-piperazin-1-yl)-10H-thieno[2,3-b][1,5]benzodiazepine (olanzapine) propan-2-ol disolvate.

Rajni M Bhardwaj1, Alastair J Florence.   

Abstract

In the title solvate, C17H20N4S·2C3H8O, pairs of olanzapine mol-ecules related by a centre of inversion stack along the a axis, forming columns, which are packed parallel to each other along the b axis, forming a sheet arrangement. The columns within these sheets are hydrogen bonded to each other through the propan-2-ol solvent mol-ecules. The diazepine ring of the olanzapine exists in a puckered conformation with the thiophene and phenyl rings making a dihedral angle of 57.66 (7)° and the piperazine ring adopts a chair conformation with the methyl group in an equatorial position.

Entities:  

Year:  2013        PMID: 23723900      PMCID: PMC3648280          DOI: 10.1107/S1600536813009811

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For literature on olanzapine and related structural studies, see: Fulton & Goa (1997 ▶); Sanger et al. (2001 ▶); Tollefson et al. (1997 ▶); Reutzel-Edens et al. (2003 ▶); Bhardwaj et al. (2013 ▶). For details of experimental methods used, see: Florence et al. (2003 ▶). For details of XPac, see: Gelbrich & Hursthouse (2005 ▶).

Experimental

Crystal data

C17H20N4S·2C3H8O M = 432.62 Triclinic, a = 9.9621 (5) Å b = 10.8702 (6) Å c = 12.2298 (7) Å α = 70.421 (2)° β = 74.560 (2)° γ = 77.296 (2)° V = 1190.24 (11) Å3 Z = 2 Mo Kα radiation μ = 0.16 mm−1 T = 123 K 0.41 × 0.34 × 0.11 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.581, T max = 0.745 16365 measured reflections 4880 independent reflections 4073 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.106 S = 1.04 4880 reflections 289 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.33 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶) and WinGX (Farrugia, 2012 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) and WinGX (Farrugia, 2012 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶) and ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: enCIFer (Allen et al., 2004 ▶) and publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813009811/fj2624sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813009811/fj2624Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813009811/fj2624Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H20N4S·2C3H8OZ = 2
Mr = 432.62F(000) = 468
Triclinic, P1Dx = 1.207 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.9621 (5) ÅCell parameters from 8504 reflections
b = 10.8702 (6) Åθ = 2.3–26.5°
c = 12.2298 (7) ŵ = 0.16 mm1
α = 70.421 (2)°T = 123 K
β = 74.560 (2)°Plate, yellow
γ = 77.296 (2)°0.41 × 0.34 × 0.11 mm
V = 1190.24 (11) Å3
Bruker APEXII CCD diffractometer4880 independent reflections
Radiation source: fine-focus sealed tube4073 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.025
φ and ω scansθmax = 26.6°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −12→10
Tmin = 0.581, Tmax = 0.745k = −11→13
16365 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.106H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.055P)2 + 0.4568P] where P = (Fo2 + 2Fc2)/3
4880 reflections(Δ/σ)max < 0.001
289 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
H1N−0.1193 (19)0.9466 (19)0.1993 (16)0.032 (5)*
H3S0.514 (2)0.758 (2)0.825 (2)0.050 (6)*
H1S0.260 (3)0.830 (2)0.854 (2)0.058 (7)*
S10.04115 (4)0.91878 (4)0.36298 (3)0.02407 (11)
N1−0.09642 (13)0.85854 (13)0.22328 (11)0.0230 (3)
N40.36303 (13)0.26018 (12)0.32261 (11)0.0219 (3)
N30.14149 (12)0.47811 (12)0.30511 (11)0.0217 (3)
N2−0.08278 (13)0.56928 (12)0.28169 (11)0.0219 (3)
C140.21368 (16)0.24248 (14)0.35573 (14)0.0244 (3)
H14A0.17870.23250.44150.029*
H14B0.20460.16060.34140.029*
C160.28887 (15)0.49962 (14)0.26562 (14)0.0223 (3)
H16A0.29850.58310.27690.027*
H16B0.32100.50680.18010.027*
C50.03110 (15)0.57973 (14)0.30703 (12)0.0200 (3)
C60.13109 (15)0.67258 (14)0.43396 (13)0.0213 (3)
H60.17550.58980.47560.026*
C70.13712 (15)0.78773 (15)0.45145 (13)0.0228 (3)
C130.12395 (16)0.35797 (14)0.28589 (14)0.0229 (3)
H13A0.15340.36490.20030.027*
H13B0.02380.34480.31260.027*
C12−0.33300 (16)0.60148 (15)0.33644 (13)0.0246 (3)
H12−0.32750.50820.35900.030*
C3−0.21953 (15)0.79562 (14)0.26365 (12)0.0211 (3)
C150.37834 (16)0.38554 (15)0.33649 (14)0.0243 (3)
H15A0.47830.39930.30900.029*
H15B0.34930.38170.42140.029*
C2−0.00519 (15)0.81452 (14)0.30203 (13)0.0208 (3)
C10−0.47383 (16)0.81431 (16)0.30737 (14)0.0259 (3)
H10−0.56330.86780.30910.031*
C4−0.20831 (15)0.65708 (14)0.29640 (13)0.0213 (3)
C80.20862 (17)0.81074 (16)0.53509 (15)0.0273 (3)
H8A0.14040.81440.60870.041*
H8B0.24670.89440.49810.041*
H8C0.28540.73840.55300.041*
C170.44267 (18)0.14983 (16)0.39751 (15)0.0301 (4)
H17A0.54230.16100.37460.045*
H17B0.43250.06690.38730.045*
H17C0.40660.14760.48080.045*
C11−0.46419 (16)0.67801 (16)0.34425 (14)0.0259 (3)
H11−0.54710.63730.37470.031*
C10.05185 (15)0.68643 (14)0.34722 (13)0.0206 (3)
C9−0.35177 (16)0.87206 (15)0.26790 (13)0.0241 (3)
H9−0.35850.96550.24330.029*
O1S0.44594 (13)0.77562 (13)0.87986 (11)0.0348 (3)
C2S0.50035 (18)0.80746 (17)0.96257 (14)0.0318 (4)
H2S0.56190.87730.91790.038*
C3S0.58641 (19)0.6878 (2)1.02927 (16)0.0425 (5)
H3S10.52780.61761.07120.064*
H3S20.62110.71071.08680.064*
H3S30.66640.65720.97330.064*
C1S0.3754 (2)0.8628 (2)1.04315 (16)0.0420 (5)
H1S10.32280.93970.99520.063*
H1S20.40870.88921.09940.063*
H1S30.31400.79521.08690.063*
O2S0.17158 (13)0.85357 (11)0.84879 (10)0.0308 (3)
C5S0.08774 (19)0.77005 (18)0.94873 (15)0.0345 (4)
H6S0.10120.78031.02320.041*
C4S−0.0636 (2)0.8177 (2)0.93962 (18)0.0464 (5)
H5S1−0.08830.90950.94130.070*
H5S2−0.12420.76251.00660.070*
H5S3−0.07710.81200.86500.070*
C6S0.1325 (3)0.62811 (19)0.9508 (2)0.0577 (6)
H7S10.11920.61690.87830.087*
H7S20.07550.57231.02020.087*
H7S30.23200.60260.95520.087*
U11U22U33U12U13U23
S10.0235 (2)0.01788 (19)0.0328 (2)−0.00162 (14)−0.00854 (15)−0.00866 (15)
N10.0219 (6)0.0188 (6)0.0268 (6)−0.0008 (5)−0.0093 (5)−0.0029 (5)
N40.0211 (6)0.0199 (6)0.0267 (6)0.0027 (5)−0.0098 (5)−0.0092 (5)
N30.0173 (6)0.0179 (6)0.0316 (7)−0.0013 (5)−0.0065 (5)−0.0092 (5)
N20.0208 (6)0.0206 (6)0.0259 (6)−0.0006 (5)−0.0085 (5)−0.0074 (5)
C140.0241 (8)0.0187 (7)0.0306 (8)−0.0019 (6)−0.0050 (6)−0.0088 (6)
C160.0181 (7)0.0198 (7)0.0306 (8)−0.0027 (6)−0.0051 (6)−0.0096 (6)
C50.0203 (7)0.0181 (7)0.0208 (7)−0.0029 (6)−0.0051 (6)−0.0039 (5)
C60.0182 (7)0.0204 (7)0.0258 (7)−0.0008 (6)−0.0063 (6)−0.0072 (6)
C70.0188 (7)0.0232 (7)0.0272 (7)−0.0017 (6)−0.0054 (6)−0.0088 (6)
C130.0202 (7)0.0201 (7)0.0310 (8)−0.0023 (6)−0.0068 (6)−0.0103 (6)
C120.0247 (8)0.0246 (8)0.0283 (8)−0.0023 (6)−0.0121 (6)−0.0082 (6)
C30.0210 (7)0.0236 (7)0.0201 (7)−0.0008 (6)−0.0074 (6)−0.0071 (6)
C150.0210 (7)0.0249 (8)0.0315 (8)0.0009 (6)−0.0098 (6)−0.0135 (6)
C20.0171 (7)0.0209 (7)0.0253 (7)−0.0022 (6)−0.0044 (6)−0.0084 (6)
C100.0201 (7)0.0337 (9)0.0267 (8)0.0042 (6)−0.0096 (6)−0.0140 (7)
C40.0211 (7)0.0231 (7)0.0223 (7)0.0005 (6)−0.0099 (6)−0.0082 (6)
C80.0261 (8)0.0267 (8)0.0346 (8)−0.0025 (6)−0.0105 (7)−0.0138 (7)
C170.0330 (9)0.0266 (8)0.0309 (8)0.0065 (7)−0.0143 (7)−0.0094 (7)
C110.0201 (7)0.0337 (8)0.0279 (8)−0.0037 (6)−0.0083 (6)−0.0119 (6)
C10.0167 (7)0.0201 (7)0.0256 (7)−0.0008 (6)−0.0050 (6)−0.0084 (6)
C90.0259 (8)0.0225 (7)0.0244 (7)0.0027 (6)−0.0100 (6)−0.0079 (6)
O1S0.0261 (6)0.0516 (8)0.0322 (6)0.0042 (5)−0.0095 (5)−0.0228 (6)
C2S0.0355 (9)0.0347 (9)0.0283 (8)−0.0080 (7)−0.0084 (7)−0.0104 (7)
C3S0.0288 (9)0.0608 (13)0.0309 (9)0.0016 (9)−0.0060 (7)−0.0098 (9)
C1S0.0504 (12)0.0442 (11)0.0350 (10)0.0068 (9)−0.0151 (9)−0.0201 (8)
O2S0.0258 (6)0.0242 (6)0.0362 (6)−0.0032 (5)−0.0058 (5)−0.0019 (5)
C5S0.0340 (9)0.0412 (10)0.0281 (8)−0.0136 (8)−0.0074 (7)−0.0042 (7)
C4S0.0314 (10)0.0684 (14)0.0401 (10)−0.0170 (9)−0.0035 (8)−0.0139 (10)
C6S0.0651 (15)0.0318 (10)0.0726 (15)−0.0172 (10)−0.0297 (12)0.0074 (10)
S1—C71.7415 (15)C10—C111.386 (2)
S1—C21.7415 (15)C10—C91.388 (2)
N1—C21.3959 (19)C10—H100.9500
N1—C31.4268 (19)C8—H8A0.9800
N1—H1N0.897 (19)C8—H8B0.9800
N4—C171.4627 (19)C8—H8C0.9800
N4—C141.4723 (19)C17—H17A0.9800
N4—C151.4728 (18)C17—H17B0.9800
N3—C51.3782 (18)C17—H17C0.9800
N3—C131.4558 (18)C11—H110.9500
N3—C161.4633 (18)C9—H90.9500
N2—C51.2897 (19)O1S—C2S1.430 (2)
N2—C41.4061 (18)O1S—H3S0.86 (2)
C14—C131.516 (2)C2S—C3S1.504 (2)
C14—H14A0.9900C2S—C1S1.515 (2)
C14—H14B0.9900C2S—H2S1.0000
C16—C151.513 (2)C3S—H3S10.9800
C16—H16A0.9900C3S—H3S20.9800
C16—H16B0.9900C3S—H3S30.9800
C5—C11.474 (2)C1S—H1S10.9800
C6—C71.355 (2)C1S—H1S20.9800
C6—C11.434 (2)C1S—H1S30.9800
C6—H60.9500O2S—C5S1.436 (2)
C7—C81.501 (2)O2S—H1S0.87 (2)
C13—H13A0.9900C5S—C6S1.502 (3)
C13—H13B0.9900C5S—C4S1.504 (3)
C12—C111.385 (2)C5S—H6S1.0000
C12—C41.399 (2)C4S—H5S10.9800
C12—H120.9500C4S—H5S20.9800
C3—C91.393 (2)C4S—H5S30.9800
C3—C41.409 (2)C6S—H7S10.9800
C15—H15A0.9900C6S—H7S20.9800
C15—H15B0.9900C6S—H7S30.9800
C2—C11.368 (2)
C7—S1—C291.98 (7)C7—C8—H8A109.5
C2—N1—C3114.13 (12)C7—C8—H8B109.5
C2—N1—H1N113.8 (12)H8A—C8—H8B109.5
C3—N1—H1N110.7 (12)C7—C8—H8C109.5
C17—N4—C14109.50 (12)H8A—C8—H8C109.5
C17—N4—C15110.02 (12)H8B—C8—H8C109.5
C14—N4—C15110.22 (11)N4—C17—H17A109.5
C5—N3—C13120.29 (12)N4—C17—H17B109.5
C5—N3—C16122.85 (12)H17A—C17—H17B109.5
C13—N3—C16110.77 (11)N4—C17—H17C109.5
C5—N2—C4123.11 (13)H17A—C17—H17C109.5
N4—C14—C13112.02 (12)H17B—C17—H17C109.5
N4—C14—H14A109.2C12—C11—C10119.60 (14)
C13—C14—H14A109.2C12—C11—H11120.2
N4—C14—H14B109.2C10—C11—H11120.2
C13—C14—H14B109.2C2—C1—C6112.09 (13)
H14A—C14—H14B107.9C2—C1—C5121.52 (13)
N3—C16—C15109.49 (12)C6—C1—C5126.38 (13)
N3—C16—H16A109.8C10—C9—C3121.24 (14)
C15—C16—H16A109.8C10—C9—H9119.4
N3—C16—H16B109.8C3—C9—H9119.4
C15—C16—H16B109.8C2S—O1S—H3S109.0 (15)
H16A—C16—H16B108.2O1S—C2S—C3S110.46 (14)
N2—C5—N3118.01 (13)O1S—C2S—C1S106.97 (14)
N2—C5—C1126.03 (13)C3S—C2S—C1S112.88 (15)
N3—C5—C1115.78 (12)O1S—C2S—H2S108.8
C7—C6—C1114.22 (13)C3S—C2S—H2S108.8
C7—C6—H6122.9C1S—C2S—H2S108.8
C1—C6—H6122.9C2S—C3S—H3S1109.5
C6—C7—C8128.92 (14)C2S—C3S—H3S2109.5
C6—C7—S1110.50 (11)H3S1—C3S—H3S2109.5
C8—C7—S1120.55 (11)C2S—C3S—H3S3109.5
N3—C13—C14108.59 (12)H3S1—C3S—H3S3109.5
N3—C13—H13A110.0H3S2—C3S—H3S3109.5
C14—C13—H13A110.0C2S—C1S—H1S1109.5
N3—C13—H13B110.0C2S—C1S—H1S2109.5
C14—C13—H13B110.0H1S1—C1S—H1S2109.5
H13A—C13—H13B108.4C2S—C1S—H1S3109.5
C11—C12—C4122.09 (14)H1S1—C1S—H1S3109.5
C11—C12—H12119.0H1S2—C1S—H1S3109.5
C4—C12—H12119.0C5S—O2S—H1S108.9 (15)
C9—C3—C4119.78 (14)O2S—C5S—C6S110.43 (16)
C9—C3—N1119.63 (13)O2S—C5S—C4S107.23 (14)
C4—C3—N1120.57 (13)C6S—C5S—C4S112.72 (17)
N4—C15—C16110.50 (12)O2S—C5S—H6S108.8
N4—C15—H15A109.5C6S—C5S—H6S108.8
C16—C15—H15A109.5C4S—C5S—H6S108.8
N4—C15—H15B109.5C5S—C4S—H5S1109.5
C16—C15—H15B109.5C5S—C4S—H5S2109.5
H15A—C15—H15B108.1H5S1—C4S—H5S2109.5
C1—C2—N1125.87 (13)C5S—C4S—H5S3109.5
C1—C2—S1111.18 (11)H5S1—C4S—H5S3109.5
N1—C2—S1122.83 (11)H5S2—C4S—H5S3109.5
C11—C10—C9119.46 (14)C5S—C6S—H7S1109.5
C11—C10—H10120.3C5S—C6S—H7S2109.5
C9—C10—H10120.3H7S1—C6S—H7S2109.5
C12—C4—N2116.18 (13)C5S—C6S—H7S3109.5
C12—C4—C3117.75 (13)H7S1—C6S—H7S3109.5
N2—C4—C3125.76 (13)H7S2—C6S—H7S3109.5
C17—N4—C14—C13176.70 (12)C7—S1—C2—N1175.64 (13)
C15—N4—C14—C1355.54 (16)C11—C12—C4—N2−173.92 (13)
C5—N3—C16—C15146.27 (13)C11—C12—C4—C30.1 (2)
C13—N3—C16—C15−61.22 (15)C5—N2—C4—C12−142.24 (15)
C4—N2—C5—N3171.00 (13)C5—N2—C4—C344.3 (2)
C4—N2—C5—C1−4.0 (2)C9—C3—C4—C12−2.3 (2)
C13—N3—C5—N2−5.6 (2)N1—C3—C4—C12179.32 (13)
C16—N3—C5—N2144.38 (14)C9—C3—C4—N2171.08 (13)
C13—N3—C5—C1169.89 (13)N1—C3—C4—N2−7.3 (2)
C16—N3—C5—C1−40.10 (19)C4—C12—C11—C102.5 (2)
C1—C6—C7—C8179.38 (15)C9—C10—C11—C12−2.8 (2)
C1—C6—C7—S11.28 (16)N1—C2—C1—C6−174.71 (13)
C2—S1—C7—C6−0.43 (12)S1—C2—C1—C61.34 (16)
C2—S1—C7—C8−178.71 (13)N1—C2—C1—C55.7 (2)
C5—N3—C13—C14−146.81 (13)S1—C2—C1—C5−178.28 (11)
C16—N3—C13—C1459.88 (15)C7—C6—C1—C2−1.73 (19)
N4—C14—C13—N3−57.24 (16)C7—C6—C1—C5177.87 (13)
C2—N1—C3—C9126.29 (14)N2—C5—C1—C2−38.1 (2)
C2—N1—C3—C4−55.31 (18)N3—C5—C1—C2146.84 (14)
C17—N4—C15—C16−176.32 (13)N2—C5—C1—C6142.37 (16)
C14—N4—C15—C16−55.47 (16)N3—C5—C1—C6−32.7 (2)
N3—C16—C15—N458.31 (16)C11—C10—C9—C30.6 (2)
C3—N1—C2—C155.2 (2)C4—C3—C9—C102.0 (2)
C3—N1—C2—S1−120.37 (13)N1—C3—C9—C10−179.59 (13)
C7—S1—C2—C1−0.55 (12)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O2Si0.90 (2)2.04 (2)2.933 (2)177 (2)
O1S—H3S···N4ii0.86 (2)1.94 (2)2.778 (2)167 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N⋯O2S i 0.90 (2)2.04 (2)2.933 (2)177 (2)
O1S—H3S⋯N4ii 0.86 (2)1.94 (2)2.778 (2)167 (2)

Symmetry codes: (i) ; (ii) .

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Authors:  Alastair J Florence; Bruno Baumgartner; Chris Weston; Norman Shankland; Alan R Kennedy; Kenneth Shankland; William I F David
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2.  A short history of SHELX.

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Journal:  J Clin Psychiatry       Date:  2001-04       Impact factor: 4.384

Review 4.  Olanzapine. A review of its pharmacological properties and therapeutic efficacy in the management of schizophrenia and related psychoses.

Authors:  B Fulton; K L Goa
Journal:  Drugs       Date:  1997-02       Impact factor: 9.546

  4 in total
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1.  Crystal structure of a mixed solvated form of amoxapine acetate.

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