Literature DB >> 23723858

3-(4-Meth-oxy-phen-yl)-1,3-selenazolo[2,3-b][1,3]benzo-thia-zol-4-ium hydrogen sulfate.

Gunay Z Mammadova1, Zhanna V Matsulevich, Galina N Borisova, Alexander V Borisov, Victor N Khrustalev.   

Abstract

The title compound, C16H12NOSSe(+)·HSO4 (-), was obtained from a mixture of 3-(4-meth-oxy-phen-yl)[1,3]selenazolo[2,3-b][1,3]benzo-thia-zol-4-ium chloride and potassium hydrogen sulfate. In the cation, the benzene ring is twisted by 71.62 (7)° from the tricycle mean plane. In the crystal, O-H⋯O hydrogen bonds link the anions into chains along [100]. The anions in adjacent chains are linked via weak C-H⋯O hydrogen bonds. The crystal packing exhibits short inter-molecular contacts between the chalcogen unit and the O atoms: Se⋯O(anion) 2.713 (3), Se⋯O(cation) 2.987 (3) and S⋯O(anion) 2.958 (3) Å.

Entities:  

Year:  2013        PMID: 23723858      PMCID: PMC3648238          DOI: 10.1107/S1600536813009288

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the synthesis and the biological properties of selenium- and nitro­gen-containing heterocycles, see: Back (2009 ▶); Mlochowski & Giurg (2009 ▶); Mukherjee et al. (2010 ▶); Selvakumar et al. (2010 ▶). For the synthesis of the starting compound, 3-(4-meth­oxy­phen­yl)[1,3]selenazolo[2,3-b][1,3]benzo­thia­zol-4-ium chloride, see: Borisov et al. (2012 ▶).

Experimental

Crystal data

C16H12NOSSeHO4S− M = 442.35 Monoclinic, a = 4.6408 (8) Å b = 18.263 (3) Å c = 9.4482 (16) Å β = 94.294 (3)° V = 798.6 (2) Å3 Z = 2 Mo Kα radiation μ = 2.64 mm−1 T = 100 K 0.30 × 0.18 × 0.02 mm

Data collection

Bruker SMART 1K CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1998 ▶) T min = 0.505, T max = 0.949 8638 measured reflections 4145 independent reflections 3555 reflections with I > 2σ(I) R int = 0.052

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.085 S = 0.97 4145 reflections 227 parameters 1 restraint H-atom parameters constrained Δρmax = 0.74 e Å−3 Δρmin = −0.99 e Å−3 Absolute structure: Flack (1983 ▶), 2075 Friedel pairs Flack parameter: 0.038 (9) Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813009288/cv5401sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813009288/cv5401Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813009288/cv5401Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12NOSSe+·HO4SF(000) = 444
Mr = 442.35Dx = 1.840 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 2780 reflections
a = 4.6408 (8) Åθ = 2.2–28.3°
b = 18.263 (3) ŵ = 2.64 mm1
c = 9.4482 (16) ÅT = 100 K
β = 94.294 (3)°Plate, colourless
V = 798.6 (2) Å30.30 × 0.18 × 0.02 mm
Z = 2
Bruker SMART 1K CCD diffractometer4145 independent reflections
Radiation source: fine-focus sealed tube3555 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.052
φ and ω scansθmax = 29.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 1998)h = −6→6
Tmin = 0.505, Tmax = 0.949k = −24→24
8638 measured reflectionsl = −12→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040H-atom parameters constrained
wR(F2) = 0.085w = 1/[σ2(Fo2) + (0.001P)2] where P = (Fo2 + 2Fc2)/3
S = 0.97(Δ/σ)max < 0.001
4145 reflectionsΔρmax = 0.74 e Å3
227 parametersΔρmin = −0.99 e Å3
1 restraintAbsolute structure: Flack (1983), 2075 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.038 (9)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Se1−0.35253 (8)0.72534 (2)0.59512 (4)0.01626 (9)
C2−0.3094 (9)0.6448 (2)0.4783 (4)0.0173 (8)
H2−0.41810.63890.38980.021*
C3−0.1125 (9)0.5955 (2)0.5288 (4)0.0165 (8)
N40.0200 (7)0.61551 (17)0.6630 (4)0.0147 (7)
C4A0.2352 (8)0.5819 (2)0.7546 (4)0.0149 (8)
C50.3787 (8)0.5164 (2)0.7368 (4)0.0168 (8)
H50.33300.48660.65590.020*
C60.5907 (9)0.4956 (2)0.8401 (4)0.0186 (9)
H60.69110.45080.82960.022*
C70.6596 (9)0.5392 (2)0.9593 (4)0.0182 (8)
H70.80680.52381.02820.022*
C80.5155 (9)0.6048 (2)0.9785 (5)0.0180 (8)
H80.56080.63461.05960.022*
C8A0.3030 (8)0.6250 (2)0.8747 (4)0.0146 (8)
S90.0967 (2)0.70586 (5)0.87325 (11)0.0174 (2)
C9A−0.0728 (8)0.6813 (2)0.7133 (4)0.0163 (8)
C10−0.0297 (8)0.5298 (2)0.4485 (4)0.0158 (8)
C110.1148 (8)0.5411 (2)0.3255 (4)0.0172 (8)
H110.15670.58960.29720.021*
C120.1981 (9)0.4824 (2)0.2441 (4)0.0182 (8)
H120.30040.49080.16220.022*
C130.1307 (8)0.4114 (2)0.2833 (4)0.0156 (8)
C14−0.0266 (9)0.3998 (2)0.4026 (5)0.0205 (9)
H14−0.08190.35160.42700.025*
C15−0.1006 (8)0.4583 (2)0.4841 (4)0.0192 (9)
H15−0.20190.44980.56630.023*
O10.2001 (6)0.35027 (15)0.2094 (3)0.0199 (6)
C160.3593 (9)0.3608 (2)0.0861 (4)0.0198 (9)
H16A0.39010.31340.04110.030*
H16B0.54660.38330.11450.030*
H16C0.24970.39300.01880.030*
S10.2806 (2)0.78392 (5)0.26484 (11)0.0180 (2)
O20.3759 (7)0.7346 (2)0.1596 (3)0.0333 (8)
O30.2090 (6)0.74833 (15)0.3937 (3)0.0228 (6)
O40.0395 (6)0.83188 (17)0.2081 (3)0.0256 (7)
O50.5298 (6)0.83793 (17)0.3069 (4)0.0277 (7)
H5O0.66340.83700.24130.042*
U11U22U33U12U13U23
Se10.01455 (16)0.01458 (16)0.02001 (18)0.00098 (18)0.00359 (13)0.00010 (19)
C20.0167 (19)0.018 (2)0.018 (2)−0.0019 (16)0.0052 (16)0.0018 (16)
C30.0159 (19)0.0149 (18)0.019 (2)−0.0012 (15)0.0058 (16)0.0005 (16)
N40.0130 (15)0.0124 (15)0.0192 (17)−0.0010 (13)0.0049 (13)−0.0009 (13)
C4A0.0115 (18)0.0145 (18)0.019 (2)−0.0025 (15)0.0036 (15)−0.0001 (15)
C50.017 (2)0.0164 (19)0.018 (2)−0.0027 (16)0.0047 (16)−0.0004 (16)
C60.0153 (19)0.0165 (19)0.025 (2)0.0015 (16)0.0085 (17)0.0024 (17)
C70.0135 (19)0.022 (2)0.019 (2)0.0007 (16)0.0020 (16)0.0031 (17)
C80.016 (2)0.0172 (19)0.021 (2)−0.0006 (16)0.0050 (17)0.0012 (17)
C8A0.0156 (19)0.0124 (18)0.016 (2)0.0009 (15)0.0053 (15)−0.0010 (15)
S90.0163 (4)0.0168 (5)0.0192 (5)0.0003 (3)0.0028 (4)−0.0013 (4)
C9A0.0155 (19)0.0165 (18)0.0175 (19)−0.0055 (16)0.0054 (15)−0.0042 (16)
C100.0132 (18)0.0137 (18)0.021 (2)−0.0009 (15)0.0019 (16)−0.0011 (16)
C110.0149 (19)0.0165 (19)0.020 (2)−0.0005 (16)0.0007 (16)0.0008 (16)
C120.018 (2)0.019 (2)0.018 (2)−0.0002 (16)0.0034 (16)0.0003 (16)
C130.0148 (19)0.0155 (19)0.016 (2)0.0012 (15)0.0000 (15)−0.0035 (16)
C140.019 (2)0.018 (2)0.025 (2)−0.0031 (17)0.0067 (17)0.0013 (17)
C150.0171 (19)0.021 (2)0.021 (2)−0.0022 (16)0.0055 (17)−0.0016 (17)
O10.0223 (15)0.0163 (14)0.0223 (15)−0.0003 (12)0.0096 (13)−0.0003 (12)
C160.021 (2)0.021 (2)0.018 (2)−0.0003 (17)0.0067 (17)−0.0029 (17)
S10.0164 (5)0.0182 (5)0.0197 (5)0.0014 (4)0.0029 (4)0.0002 (4)
O20.0372 (17)0.036 (2)0.0270 (14)0.0050 (17)0.0053 (13)−0.0125 (16)
O30.0204 (15)0.0232 (15)0.0252 (15)0.0021 (12)0.0041 (12)0.0073 (12)
O40.0152 (15)0.0258 (16)0.0353 (18)0.0019 (12)−0.0007 (13)0.0102 (14)
O50.0167 (15)0.0263 (17)0.0406 (18)−0.0014 (13)0.0064 (14)−0.0019 (15)
Se1—C9A1.834 (4)C10—C151.394 (5)
Se1—C21.859 (4)C10—C111.399 (6)
C2—C31.345 (5)C11—C121.391 (6)
C2—H20.9500C11—H110.9500
C3—N41.415 (5)C12—C131.390 (6)
C3—C101.485 (5)C12—H120.9500
N4—C9A1.373 (5)C13—O11.367 (5)
N4—C4A1.412 (5)C13—C141.404 (6)
C4A—C51.385 (5)C14—C151.376 (6)
C4A—C8A1.397 (5)C14—H140.9500
C5—C61.386 (6)C15—H150.9500
C5—H50.9500O1—C161.439 (5)
C6—C71.397 (6)C16—H16A0.9800
C6—H60.9500C16—H16B0.9800
C7—C81.391 (6)C16—H16C0.9800
C7—H70.9500S1—O21.436 (3)
C8—C8A1.388 (6)S1—O31.441 (3)
C8—H80.9500S1—O41.489 (3)
C8A—S91.759 (4)S1—O51.549 (3)
S9—C9A1.710 (4)O5—H5O0.9086
C9A—Se1—C284.92 (18)C15—C10—C11118.3 (4)
C3—C2—Se1114.8 (3)C15—C10—C3123.9 (4)
C3—C2—H2122.6C11—C10—C3117.7 (3)
Se1—C2—H2122.6C12—C11—C10121.1 (4)
C2—C3—N4112.5 (4)C12—C11—H11119.5
C2—C3—C10123.7 (4)C10—C11—H11119.5
N4—C3—C10123.7 (3)C11—C12—C13119.6 (4)
C9A—N4—C4A113.2 (3)C11—C12—H12120.2
C9A—N4—C3114.2 (3)C13—C12—H12120.2
C4A—N4—C3132.6 (3)O1—C13—C12124.0 (4)
C5—C4A—C8A120.3 (4)O1—C13—C14116.3 (4)
C5—C4A—N4128.7 (4)C12—C13—C14119.7 (4)
C8A—C4A—N4111.0 (3)C15—C14—C13119.9 (4)
C4A—C5—C6118.3 (4)C15—C14—H14120.0
C4A—C5—H5120.9C13—C14—H14120.0
C6—C5—H5120.9C14—C15—C10121.3 (4)
C5—C6—C7121.3 (4)C14—C15—H15119.4
C5—C6—H6119.4C10—C15—H15119.4
C7—C6—H6119.4C13—O1—C16117.3 (3)
C8—C7—C6120.9 (4)O1—C16—H16A109.5
C8—C7—H7119.6O1—C16—H16B109.5
C6—C7—H7119.6H16A—C16—H16B109.5
C8A—C8—C7117.4 (4)O1—C16—H16C109.5
C8A—C8—H8121.3H16A—C16—H16C109.5
C7—C8—H8121.3H16B—C16—H16C109.5
C8—C8A—C4A121.9 (4)O2—S1—O3113.9 (2)
C8—C8A—S9125.9 (3)O2—S1—O4112.44 (19)
C4A—C8A—S9112.2 (3)O3—S1—O4110.80 (18)
C9A—S9—C8A90.01 (19)O2—S1—O5108.31 (19)
N4—C9A—S9113.6 (3)O3—S1—O5106.59 (18)
N4—C9A—Se1113.5 (3)O4—S1—O5104.13 (18)
S9—C9A—Se1132.9 (2)S1—O5—H5O110.3
C9A—Se1—C2—C30.2 (3)C4A—N4—C9A—S90.3 (4)
Se1—C2—C3—N40.6 (4)C3—N4—C9A—S9−178.3 (3)
Se1—C2—C3—C10−175.7 (3)C4A—N4—C9A—Se1−180.0 (3)
C2—C3—N4—C9A−1.3 (5)C3—N4—C9A—Se11.5 (4)
C10—C3—N4—C9A174.9 (4)C8A—S9—C9A—N40.1 (3)
C2—C3—N4—C4A−179.5 (4)C8A—S9—C9A—Se1−179.6 (3)
C10—C3—N4—C4A−3.3 (6)C2—Se1—C9A—N4−0.9 (3)
C9A—N4—C4A—C5−179.1 (4)C2—Se1—C9A—S9178.8 (3)
C3—N4—C4A—C5−0.9 (7)C2—C3—C10—C15−110.1 (5)
C9A—N4—C4A—C8A−0.6 (4)N4—C3—C10—C1574.1 (5)
C3—N4—C4A—C8A177.6 (4)C2—C3—C10—C1166.4 (5)
C8A—C4A—C5—C6−0.5 (6)N4—C3—C10—C11−109.4 (4)
N4—C4A—C5—C6177.9 (4)C15—C10—C11—C12−2.9 (6)
C4A—C5—C6—C7−0.1 (6)C3—C10—C11—C12−179.6 (4)
C5—C6—C7—C80.4 (6)C10—C11—C12—C131.6 (6)
C6—C7—C8—C8A−0.2 (6)C11—C12—C13—O1179.2 (4)
C7—C8—C8A—C4A−0.3 (6)C11—C12—C13—C141.5 (6)
C7—C8—C8A—S9−178.7 (3)O1—C13—C14—C15178.9 (4)
C5—C4A—C8A—C80.7 (6)C12—C13—C14—C15−3.3 (6)
N4—C4A—C8A—C8−177.9 (4)C13—C14—C15—C101.9 (6)
C5—C4A—C8A—S9179.3 (3)C11—C10—C15—C141.2 (6)
N4—C4A—C8A—S90.7 (4)C3—C10—C15—C14177.7 (4)
C8—C8A—S9—C9A178.1 (4)C12—C13—O1—C161.7 (5)
C4A—C8A—S9—C9A−0.4 (3)C14—C13—O1—C16179.5 (3)
D—H···AD—HH···AD···AD—H···A
O5—H5O···O4i0.911.802.610 (4)147
C6—H6···O4ii0.952.543.494 (5)178
C8—H8···O2iii0.952.263.022 (5)137
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O5—H5O⋯O4i 0.911.802.610 (4)147
C6—H6⋯O4ii 0.952.543.494 (5)178
C8—H8⋯O2iii 0.952.263.022 (5)137

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  Organoselenium chemistry: role of intramolecular interactions.

Authors:  Anna J Mukherjee; Sanjio S Zade; Harkesh B Singh; Raghavan B Sunoj
Journal:  Chem Rev       Date:  2010-07-14       Impact factor: 60.622

2.  Aromatic ring strain in arylselenenyl bromides: role in facile synthesis of selenenate esters via intramolecular cyclization.

Authors:  K Selvakumar; Harkesh B Singh; Ray J Butcher
Journal:  Chemistry       Date:  2010-09-10       Impact factor: 5.236

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.