| Literature DB >> 23723858 |
Gunay Z Mammadova1, Zhanna V Matsulevich, Galina N Borisova, Alexander V Borisov, Victor N Khrustalev.
Abstract
The title compound, C16H12NOSSe(+)·Entities:
Year: 2013 PMID: 23723858 PMCID: PMC3648238 DOI: 10.1107/S1600536813009288
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H12NOSSe+·HO4S− | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 2780 reflections |
| θ = 2.2–28.3° | |
| µ = 2.64 mm−1 | |
| β = 94.294 (3)° | Plate, colourless |
| 0.30 × 0.18 × 0.02 mm | |
| Bruker SMART 1K CCD diffractometer | 4145 independent reflections |
| Radiation source: fine-focus sealed tube | 3555 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 29.0°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 8638 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 4145 reflections | Δρmax = 0.74 e Å−3 |
| 227 parameters | Δρmin = −0.99 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 2075 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.038 (9) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Se1 | −0.35253 (8) | 0.72534 (2) | 0.59512 (4) | 0.01626 (9) | |
| C2 | −0.3094 (9) | 0.6448 (2) | 0.4783 (4) | 0.0173 (8) | |
| H2 | −0.4181 | 0.6389 | 0.3898 | 0.021* | |
| C3 | −0.1125 (9) | 0.5955 (2) | 0.5288 (4) | 0.0165 (8) | |
| N4 | 0.0200 (7) | 0.61551 (17) | 0.6630 (4) | 0.0147 (7) | |
| C4A | 0.2352 (8) | 0.5819 (2) | 0.7546 (4) | 0.0149 (8) | |
| C5 | 0.3787 (8) | 0.5164 (2) | 0.7368 (4) | 0.0168 (8) | |
| H5 | 0.3330 | 0.4866 | 0.6559 | 0.020* | |
| C6 | 0.5907 (9) | 0.4956 (2) | 0.8401 (4) | 0.0186 (9) | |
| H6 | 0.6911 | 0.4508 | 0.8296 | 0.022* | |
| C7 | 0.6596 (9) | 0.5392 (2) | 0.9593 (4) | 0.0182 (8) | |
| H7 | 0.8068 | 0.5238 | 1.0282 | 0.022* | |
| C8 | 0.5155 (9) | 0.6048 (2) | 0.9785 (5) | 0.0180 (8) | |
| H8 | 0.5608 | 0.6346 | 1.0596 | 0.022* | |
| C8A | 0.3030 (8) | 0.6250 (2) | 0.8747 (4) | 0.0146 (8) | |
| S9 | 0.0967 (2) | 0.70586 (5) | 0.87325 (11) | 0.0174 (2) | |
| C9A | −0.0728 (8) | 0.6813 (2) | 0.7133 (4) | 0.0163 (8) | |
| C10 | −0.0297 (8) | 0.5298 (2) | 0.4485 (4) | 0.0158 (8) | |
| C11 | 0.1148 (8) | 0.5411 (2) | 0.3255 (4) | 0.0172 (8) | |
| H11 | 0.1567 | 0.5896 | 0.2972 | 0.021* | |
| C12 | 0.1981 (9) | 0.4824 (2) | 0.2441 (4) | 0.0182 (8) | |
| H12 | 0.3004 | 0.4908 | 0.1622 | 0.022* | |
| C13 | 0.1307 (8) | 0.4114 (2) | 0.2833 (4) | 0.0156 (8) | |
| C14 | −0.0266 (9) | 0.3998 (2) | 0.4026 (5) | 0.0205 (9) | |
| H14 | −0.0819 | 0.3516 | 0.4270 | 0.025* | |
| C15 | −0.1006 (8) | 0.4583 (2) | 0.4841 (4) | 0.0192 (9) | |
| H15 | −0.2019 | 0.4498 | 0.5663 | 0.023* | |
| O1 | 0.2001 (6) | 0.35027 (15) | 0.2094 (3) | 0.0199 (6) | |
| C16 | 0.3593 (9) | 0.3608 (2) | 0.0861 (4) | 0.0198 (9) | |
| H16A | 0.3901 | 0.3134 | 0.0411 | 0.030* | |
| H16B | 0.5466 | 0.3833 | 0.1145 | 0.030* | |
| H16C | 0.2497 | 0.3930 | 0.0188 | 0.030* | |
| S1 | 0.2806 (2) | 0.78392 (5) | 0.26484 (11) | 0.0180 (2) | |
| O2 | 0.3759 (7) | 0.7346 (2) | 0.1596 (3) | 0.0333 (8) | |
| O3 | 0.2090 (6) | 0.74833 (15) | 0.3937 (3) | 0.0228 (6) | |
| O4 | 0.0395 (6) | 0.83188 (17) | 0.2081 (3) | 0.0256 (7) | |
| O5 | 0.5298 (6) | 0.83793 (17) | 0.3069 (4) | 0.0277 (7) | |
| H5O | 0.6634 | 0.8370 | 0.2413 | 0.042* |
| Se1 | 0.01455 (16) | 0.01458 (16) | 0.02001 (18) | 0.00098 (18) | 0.00359 (13) | 0.00010 (19) |
| C2 | 0.0167 (19) | 0.018 (2) | 0.018 (2) | −0.0019 (16) | 0.0052 (16) | 0.0018 (16) |
| C3 | 0.0159 (19) | 0.0149 (18) | 0.019 (2) | −0.0012 (15) | 0.0058 (16) | 0.0005 (16) |
| N4 | 0.0130 (15) | 0.0124 (15) | 0.0192 (17) | −0.0010 (13) | 0.0049 (13) | −0.0009 (13) |
| C4A | 0.0115 (18) | 0.0145 (18) | 0.019 (2) | −0.0025 (15) | 0.0036 (15) | −0.0001 (15) |
| C5 | 0.017 (2) | 0.0164 (19) | 0.018 (2) | −0.0027 (16) | 0.0047 (16) | −0.0004 (16) |
| C6 | 0.0153 (19) | 0.0165 (19) | 0.025 (2) | 0.0015 (16) | 0.0085 (17) | 0.0024 (17) |
| C7 | 0.0135 (19) | 0.022 (2) | 0.019 (2) | 0.0007 (16) | 0.0020 (16) | 0.0031 (17) |
| C8 | 0.016 (2) | 0.0172 (19) | 0.021 (2) | −0.0006 (16) | 0.0050 (17) | 0.0012 (17) |
| C8A | 0.0156 (19) | 0.0124 (18) | 0.016 (2) | 0.0009 (15) | 0.0053 (15) | −0.0010 (15) |
| S9 | 0.0163 (4) | 0.0168 (5) | 0.0192 (5) | 0.0003 (3) | 0.0028 (4) | −0.0013 (4) |
| C9A | 0.0155 (19) | 0.0165 (18) | 0.0175 (19) | −0.0055 (16) | 0.0054 (15) | −0.0042 (16) |
| C10 | 0.0132 (18) | 0.0137 (18) | 0.021 (2) | −0.0009 (15) | 0.0019 (16) | −0.0011 (16) |
| C11 | 0.0149 (19) | 0.0165 (19) | 0.020 (2) | −0.0005 (16) | 0.0007 (16) | 0.0008 (16) |
| C12 | 0.018 (2) | 0.019 (2) | 0.018 (2) | −0.0002 (16) | 0.0034 (16) | 0.0003 (16) |
| C13 | 0.0148 (19) | 0.0155 (19) | 0.016 (2) | 0.0012 (15) | 0.0000 (15) | −0.0035 (16) |
| C14 | 0.019 (2) | 0.018 (2) | 0.025 (2) | −0.0031 (17) | 0.0067 (17) | 0.0013 (17) |
| C15 | 0.0171 (19) | 0.021 (2) | 0.021 (2) | −0.0022 (16) | 0.0055 (17) | −0.0016 (17) |
| O1 | 0.0223 (15) | 0.0163 (14) | 0.0223 (15) | −0.0003 (12) | 0.0096 (13) | −0.0003 (12) |
| C16 | 0.021 (2) | 0.021 (2) | 0.018 (2) | −0.0003 (17) | 0.0067 (17) | −0.0029 (17) |
| S1 | 0.0164 (5) | 0.0182 (5) | 0.0197 (5) | 0.0014 (4) | 0.0029 (4) | 0.0002 (4) |
| O2 | 0.0372 (17) | 0.036 (2) | 0.0270 (14) | 0.0050 (17) | 0.0053 (13) | −0.0125 (16) |
| O3 | 0.0204 (15) | 0.0232 (15) | 0.0252 (15) | 0.0021 (12) | 0.0041 (12) | 0.0073 (12) |
| O4 | 0.0152 (15) | 0.0258 (16) | 0.0353 (18) | 0.0019 (12) | −0.0007 (13) | 0.0102 (14) |
| O5 | 0.0167 (15) | 0.0263 (17) | 0.0406 (18) | −0.0014 (13) | 0.0064 (14) | −0.0019 (15) |
| Se1—C9A | 1.834 (4) | C10—C15 | 1.394 (5) |
| Se1—C2 | 1.859 (4) | C10—C11 | 1.399 (6) |
| C2—C3 | 1.345 (5) | C11—C12 | 1.391 (6) |
| C2—H2 | 0.9500 | C11—H11 | 0.9500 |
| C3—N4 | 1.415 (5) | C12—C13 | 1.390 (6) |
| C3—C10 | 1.485 (5) | C12—H12 | 0.9500 |
| N4—C9A | 1.373 (5) | C13—O1 | 1.367 (5) |
| N4—C4A | 1.412 (5) | C13—C14 | 1.404 (6) |
| C4A—C5 | 1.385 (5) | C14—C15 | 1.376 (6) |
| C4A—C8A | 1.397 (5) | C14—H14 | 0.9500 |
| C5—C6 | 1.386 (6) | C15—H15 | 0.9500 |
| C5—H5 | 0.9500 | O1—C16 | 1.439 (5) |
| C6—C7 | 1.397 (6) | C16—H16A | 0.9800 |
| C6—H6 | 0.9500 | C16—H16B | 0.9800 |
| C7—C8 | 1.391 (6) | C16—H16C | 0.9800 |
| C7—H7 | 0.9500 | S1—O2 | 1.436 (3) |
| C8—C8A | 1.388 (6) | S1—O3 | 1.441 (3) |
| C8—H8 | 0.9500 | S1—O4 | 1.489 (3) |
| C8A—S9 | 1.759 (4) | S1—O5 | 1.549 (3) |
| S9—C9A | 1.710 (4) | O5—H5O | 0.9086 |
| C9A—Se1—C2 | 84.92 (18) | C15—C10—C11 | 118.3 (4) |
| C3—C2—Se1 | 114.8 (3) | C15—C10—C3 | 123.9 (4) |
| C3—C2—H2 | 122.6 | C11—C10—C3 | 117.7 (3) |
| Se1—C2—H2 | 122.6 | C12—C11—C10 | 121.1 (4) |
| C2—C3—N4 | 112.5 (4) | C12—C11—H11 | 119.5 |
| C2—C3—C10 | 123.7 (4) | C10—C11—H11 | 119.5 |
| N4—C3—C10 | 123.7 (3) | C11—C12—C13 | 119.6 (4) |
| C9A—N4—C4A | 113.2 (3) | C11—C12—H12 | 120.2 |
| C9A—N4—C3 | 114.2 (3) | C13—C12—H12 | 120.2 |
| C4A—N4—C3 | 132.6 (3) | O1—C13—C12 | 124.0 (4) |
| C5—C4A—C8A | 120.3 (4) | O1—C13—C14 | 116.3 (4) |
| C5—C4A—N4 | 128.7 (4) | C12—C13—C14 | 119.7 (4) |
| C8A—C4A—N4 | 111.0 (3) | C15—C14—C13 | 119.9 (4) |
| C4A—C5—C6 | 118.3 (4) | C15—C14—H14 | 120.0 |
| C4A—C5—H5 | 120.9 | C13—C14—H14 | 120.0 |
| C6—C5—H5 | 120.9 | C14—C15—C10 | 121.3 (4) |
| C5—C6—C7 | 121.3 (4) | C14—C15—H15 | 119.4 |
| C5—C6—H6 | 119.4 | C10—C15—H15 | 119.4 |
| C7—C6—H6 | 119.4 | C13—O1—C16 | 117.3 (3) |
| C8—C7—C6 | 120.9 (4) | O1—C16—H16A | 109.5 |
| C8—C7—H7 | 119.6 | O1—C16—H16B | 109.5 |
| C6—C7—H7 | 119.6 | H16A—C16—H16B | 109.5 |
| C8A—C8—C7 | 117.4 (4) | O1—C16—H16C | 109.5 |
| C8A—C8—H8 | 121.3 | H16A—C16—H16C | 109.5 |
| C7—C8—H8 | 121.3 | H16B—C16—H16C | 109.5 |
| C8—C8A—C4A | 121.9 (4) | O2—S1—O3 | 113.9 (2) |
| C8—C8A—S9 | 125.9 (3) | O2—S1—O4 | 112.44 (19) |
| C4A—C8A—S9 | 112.2 (3) | O3—S1—O4 | 110.80 (18) |
| C9A—S9—C8A | 90.01 (19) | O2—S1—O5 | 108.31 (19) |
| N4—C9A—S9 | 113.6 (3) | O3—S1—O5 | 106.59 (18) |
| N4—C9A—Se1 | 113.5 (3) | O4—S1—O5 | 104.13 (18) |
| S9—C9A—Se1 | 132.9 (2) | S1—O5—H5O | 110.3 |
| C9A—Se1—C2—C3 | 0.2 (3) | C4A—N4—C9A—S9 | 0.3 (4) |
| Se1—C2—C3—N4 | 0.6 (4) | C3—N4—C9A—S9 | −178.3 (3) |
| Se1—C2—C3—C10 | −175.7 (3) | C4A—N4—C9A—Se1 | −180.0 (3) |
| C2—C3—N4—C9A | −1.3 (5) | C3—N4—C9A—Se1 | 1.5 (4) |
| C10—C3—N4—C9A | 174.9 (4) | C8A—S9—C9A—N4 | 0.1 (3) |
| C2—C3—N4—C4A | −179.5 (4) | C8A—S9—C9A—Se1 | −179.6 (3) |
| C10—C3—N4—C4A | −3.3 (6) | C2—Se1—C9A—N4 | −0.9 (3) |
| C9A—N4—C4A—C5 | −179.1 (4) | C2—Se1—C9A—S9 | 178.8 (3) |
| C3—N4—C4A—C5 | −0.9 (7) | C2—C3—C10—C15 | −110.1 (5) |
| C9A—N4—C4A—C8A | −0.6 (4) | N4—C3—C10—C15 | 74.1 (5) |
| C3—N4—C4A—C8A | 177.6 (4) | C2—C3—C10—C11 | 66.4 (5) |
| C8A—C4A—C5—C6 | −0.5 (6) | N4—C3—C10—C11 | −109.4 (4) |
| N4—C4A—C5—C6 | 177.9 (4) | C15—C10—C11—C12 | −2.9 (6) |
| C4A—C5—C6—C7 | −0.1 (6) | C3—C10—C11—C12 | −179.6 (4) |
| C5—C6—C7—C8 | 0.4 (6) | C10—C11—C12—C13 | 1.6 (6) |
| C6—C7—C8—C8A | −0.2 (6) | C11—C12—C13—O1 | 179.2 (4) |
| C7—C8—C8A—C4A | −0.3 (6) | C11—C12—C13—C14 | 1.5 (6) |
| C7—C8—C8A—S9 | −178.7 (3) | O1—C13—C14—C15 | 178.9 (4) |
| C5—C4A—C8A—C8 | 0.7 (6) | C12—C13—C14—C15 | −3.3 (6) |
| N4—C4A—C8A—C8 | −177.9 (4) | C13—C14—C15—C10 | 1.9 (6) |
| C5—C4A—C8A—S9 | 179.3 (3) | C11—C10—C15—C14 | 1.2 (6) |
| N4—C4A—C8A—S9 | 0.7 (4) | C3—C10—C15—C14 | 177.7 (4) |
| C8—C8A—S9—C9A | 178.1 (4) | C12—C13—O1—C16 | 1.7 (5) |
| C4A—C8A—S9—C9A | −0.4 (3) | C14—C13—O1—C16 | 179.5 (3) |
| H··· | ||||
| O5—H5 | 0.91 | 1.80 | 2.610 (4) | 147 |
| C6—H6···O4ii | 0.95 | 2.54 | 3.494 (5) | 178 |
| C8—H8···O2iii | 0.95 | 2.26 | 3.022 (5) | 137 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O5—H5 | 0.91 | 1.80 | 2.610 (4) | 147 |
| C6—H6⋯O4ii | 0.95 | 2.54 | 3.494 (5) | 178 |
| C8—H8⋯O2iii | 0.95 | 2.26 | 3.022 (5) | 137 |
Symmetry codes: (i) ; (ii) ; (iii) .