| Literature DB >> 23723849 |
Claudia M Quiroa-Montalván1, Daniel Chávez, Reyna Reyes-Martínez, David Morales-Morales, Miguel Parra-Hake.
Abstract
In the title compound, C24H20N6O, the pyridin-3-yl groups on the ethyl-ene fragment are found in a trans conformation with a C(py)-C(e)-C(e)-C(py) (py = pyridine, e = ethylene) torsion angle of 179.2 (3)°. The dihedral angle between the pyridine rings is 3.5 (1)°. In the crystal, N-H⋯N and C-H⋯O=C inter-actions form a layer arrangement parallel to the bc plane. The compound displays disorder of the ethyl-ene fragment over two positions with an occupancy ratio of 0.676 (7) to 0.324 (7) that extends into the amide section of the nicotinamide moiety.Entities:
Year: 2013 PMID: 23723849 PMCID: PMC3647883 DOI: 10.1107/S1600536813008544
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C24H20N6O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3500 reflections |
| θ = 2.4–23.6° | |
| µ = 0.08 mm−1 | |
| β = 99.857 (3)° | Prism, colourless |
| 0.28 × 0.26 × 0.14 mm | |
| Bruker SMART APEX CCD diffractometer | 3821 independent reflections |
| Radiation source: fine-focus sealed tube | 2371 reflections with |
| Graphite monochromator | |
| Detector resolution: 0.661 pixels mm-1 | θmax = 25.4°, θmin = 1.8° |
| ω–scans | |
| Absorption correction: multi-scan ( | |
| 17508 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3821 reflections | (Δ/σ)max < 0.001 |
| 312 parameters | Δρmax = 0.34 e Å−3 |
| 48 restraints | Δρmin = −0.25 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| O1 | 0.3921 (12) | 0.342 (4) | 0.0332 (5) | 0.109 (5) | 0.61 (6) |
| O1B | 0.388 (2) | 0.408 (5) | 0.0340 (9) | 0.121 (7) | 0.39 (6) |
| N1 | 0.1399 (3) | 0.3383 (5) | 0.18544 (14) | 0.1025 (11) | |
| C2 | 0.2412 (3) | 0.3745 (4) | 0.16651 (14) | 0.0731 (9) | |
| H2 | 0.2921 | 0.4413 | 0.1921 | 0.088* | |
| C3 | 0.2751 (2) | 0.3191 (3) | 0.11162 (12) | 0.0571 (7) | |
| C4 | 0.2000 (3) | 0.2207 (4) | 0.07388 (16) | 0.0878 (10) | |
| H4 | 0.2195 | 0.1815 | 0.0361 | 0.105* | |
| C5 | 0.0947 (3) | 0.1806 (5) | 0.0931 (2) | 0.1138 (14) | |
| H5 | 0.0424 | 0.1127 | 0.0691 | 0.137* | |
| C6 | 0.0703 (3) | 0.2443 (6) | 0.1484 (2) | 0.1124 (15) | |
| H6 | −0.0012 | 0.2188 | 0.1607 | 0.135* | |
| C7 | 0.3861 (3) | 0.3661 (4) | 0.08965 (13) | 0.0665 (8) | |
| N8 | 0.4788 (2) | 0.4040 (3) | 0.13361 (11) | 0.0601 (6) | |
| H8 | 0.479 (3) | 0.397 (3) | 0.1736 (15) | 0.072* | |
| C9 | 0.5966 (4) | 0.4277 (5) | 0.1140 (2) | 0.0568 (12) | 0.676 (7) |
| H9 | 0.5824 | 0.4637 | 0.0694 | 0.068* | 0.676 (7) |
| C10 | 0.6602 (4) | 0.5549 (6) | 0.1553 (2) | 0.0574 (12) | 0.676 (7) |
| H10 | 0.6793 | 0.5219 | 0.2003 | 0.069* | 0.676 (7) |
| C9B | 0.5658 (7) | 0.5179 (11) | 0.1168 (4) | 0.057 (2) | 0.324 (7) |
| H9B | 0.5616 | 0.5235 | 0.0701 | 0.068* | 0.324 (7) |
| C10B | 0.6859 (6) | 0.4612 (10) | 0.1491 (4) | 0.059 (2) | 0.324 (7) |
| H10B | 0.6920 | 0.4578 | 0.1960 | 0.071* | 0.324 (7) |
| N11 | 0.7701 (2) | 0.5794 (3) | 0.12864 (11) | 0.0712 (7) | |
| N12 | 1.1564 (3) | 0.7923 (6) | 0.1683 (2) | 0.1422 (16) | |
| C13 | 1.0551 (4) | 0.7403 (5) | 0.18534 (19) | 0.1078 (13) | |
| H13 | 1.0438 | 0.7562 | 0.2274 | 0.129* | |
| C14 | 0.9677 (3) | 0.6652 (4) | 0.14390 (16) | 0.0712 (8) | |
| C15 | 0.9841 (3) | 0.6467 (4) | 0.08213 (18) | 0.0862 (10) | |
| H15 | 0.9262 | 0.5988 | 0.0525 | 0.103* | |
| C16 | 1.0847 (4) | 0.6976 (6) | 0.0634 (2) | 0.1156 (15) | |
| H16 | 1.0960 | 0.6850 | 0.0211 | 0.139* | |
| C17 | 1.1665 (4) | 0.7655 (7) | 0.1062 (3) | 0.1348 (19) | |
| H17 | 1.2356 | 0.7970 | 0.0926 | 0.162* | |
| C18 | 0.8618 (3) | 0.6101 (4) | 0.16693 (14) | 0.0697 (8) | |
| H18 | 0.8634 | 0.5979 | 0.2108 | 0.084* | |
| N19 | 0.7524 (3) | 0.1072 (3) | 0.04909 (13) | 0.0848 (8) | |
| C20 | 0.7026 (3) | 0.2381 (4) | 0.05998 (15) | 0.0755 (9) | |
| H20 | 0.6810 | 0.3032 | 0.0251 | 0.091* | |
| C21 | 0.6799 (3) | 0.2862 (3) | 0.11762 (17) | 0.0752 (9) | |
| C22 | 0.7164 (3) | 0.1917 (4) | 0.16992 (16) | 0.0744 (9) | |
| H22 | 0.7054 | 0.2208 | 0.2109 | 0.089* | |
| C23 | 0.7687 (3) | 0.0550 (4) | 0.16045 (16) | 0.0746 (9) | |
| H23 | 0.7932 | −0.0112 | 0.1947 | 0.090* | |
| C24 | 0.7842 (3) | 0.0183 (4) | 0.10042 (18) | 0.0846 (10) | |
| H24 | 0.8195 | −0.0754 | 0.0944 | 0.102* | |
| N25 | 0.4976 (3) | 0.8743 (3) | 0.21511 (13) | 0.0795 (8) | |
| C26 | 0.5503 (3) | 0.7463 (4) | 0.20567 (17) | 0.0863 (10) | |
| H26 | 0.5746 | 0.6851 | 0.2416 | 0.104* | |
| C27 | 0.5731 (3) | 0.6934 (4) | 0.14883 (18) | 0.0860 (11) | |
| C28 | 0.5332 (3) | 0.7813 (4) | 0.09498 (16) | 0.0772 (9) | |
| H28 | 0.5458 | 0.7502 | 0.0546 | 0.093* | |
| C29 | 0.4749 (3) | 0.9150 (4) | 0.10240 (15) | 0.0778 (9) | |
| H29 | 0.4467 | 0.9769 | 0.0673 | 0.093* | |
| C30 | 0.4591 (3) | 0.9551 (4) | 0.16320 (17) | 0.0842 (10) | |
| H30 | 0.4185 | 1.0454 | 0.1680 | 0.101* |
| O1 | 0.089 (4) | 0.189 (14) | 0.055 (3) | −0.054 (6) | 0.026 (3) | −0.040 (4) |
| O1B | 0.144 (10) | 0.172 (17) | 0.049 (6) | −0.066 (10) | 0.022 (5) | 0.009 (7) |
| N1 | 0.0616 (17) | 0.170 (3) | 0.0795 (19) | −0.006 (2) | 0.0214 (15) | 0.001 (2) |
| C2 | 0.0564 (17) | 0.103 (2) | 0.0609 (18) | 0.0009 (16) | 0.0132 (14) | 0.0014 (16) |
| C3 | 0.0552 (15) | 0.0628 (17) | 0.0527 (15) | −0.0015 (13) | 0.0074 (12) | 0.0027 (13) |
| C4 | 0.074 (2) | 0.111 (3) | 0.078 (2) | −0.016 (2) | 0.0106 (17) | −0.018 (2) |
| C5 | 0.076 (3) | 0.149 (4) | 0.113 (3) | −0.046 (3) | 0.004 (2) | −0.012 (3) |
| C6 | 0.062 (2) | 0.179 (4) | 0.097 (3) | −0.026 (3) | 0.017 (2) | 0.020 (3) |
| C7 | 0.0663 (18) | 0.090 (2) | 0.0447 (16) | −0.0137 (16) | 0.0145 (14) | −0.0084 (15) |
| N8 | 0.0593 (14) | 0.0737 (16) | 0.0497 (13) | −0.0127 (12) | 0.0164 (12) | 0.0006 (12) |
| C9 | 0.060 (3) | 0.061 (3) | 0.052 (2) | −0.004 (2) | 0.0180 (19) | 0.001 (2) |
| C10 | 0.062 (3) | 0.062 (3) | 0.050 (2) | −0.002 (2) | 0.0136 (18) | −0.001 (2) |
| C9B | 0.065 (4) | 0.056 (5) | 0.051 (4) | −0.003 (4) | 0.016 (3) | −0.001 (4) |
| C10B | 0.062 (4) | 0.063 (5) | 0.053 (4) | −0.007 (4) | 0.012 (3) | −0.004 (4) |
| N11 | 0.0568 (14) | 0.0999 (19) | 0.0586 (14) | −0.0186 (14) | 0.0144 (12) | 0.0066 (13) |
| N12 | 0.085 (2) | 0.204 (4) | 0.131 (3) | −0.063 (3) | −0.001 (2) | 0.024 (3) |
| C13 | 0.089 (3) | 0.149 (4) | 0.083 (2) | −0.028 (3) | 0.006 (2) | 0.015 (2) |
| C14 | 0.0514 (16) | 0.084 (2) | 0.078 (2) | 0.0023 (16) | 0.0122 (15) | 0.0171 (17) |
| C15 | 0.072 (2) | 0.100 (3) | 0.088 (2) | −0.0076 (19) | 0.0172 (18) | 0.002 (2) |
| C16 | 0.089 (3) | 0.166 (4) | 0.100 (3) | −0.010 (3) | 0.038 (3) | 0.018 (3) |
| C17 | 0.081 (3) | 0.187 (5) | 0.142 (4) | −0.027 (3) | 0.036 (3) | 0.050 (4) |
| C18 | 0.0616 (18) | 0.087 (2) | 0.0602 (18) | −0.0030 (16) | 0.0107 (15) | 0.0063 (16) |
| N19 | 0.108 (2) | 0.0748 (18) | 0.0763 (18) | 0.0132 (16) | 0.0290 (16) | −0.0048 (15) |
| C20 | 0.078 (2) | 0.076 (2) | 0.077 (2) | 0.0063 (18) | 0.0268 (17) | 0.0182 (17) |
| C21 | 0.092 (2) | 0.0555 (17) | 0.093 (2) | 0.0013 (16) | 0.0553 (19) | 0.0079 (17) |
| C22 | 0.082 (2) | 0.073 (2) | 0.075 (2) | −0.0111 (17) | 0.0341 (17) | −0.0086 (17) |
| C23 | 0.0673 (19) | 0.081 (2) | 0.076 (2) | 0.0040 (17) | 0.0114 (16) | 0.0153 (17) |
| C24 | 0.098 (3) | 0.069 (2) | 0.093 (3) | 0.0172 (19) | 0.033 (2) | 0.0021 (19) |
| N25 | 0.101 (2) | 0.0716 (18) | 0.0682 (17) | 0.0071 (16) | 0.0199 (15) | −0.0082 (14) |
| C26 | 0.109 (3) | 0.071 (2) | 0.090 (2) | 0.010 (2) | 0.046 (2) | 0.0196 (18) |
| C27 | 0.116 (3) | 0.0551 (18) | 0.107 (3) | 0.0028 (18) | 0.075 (2) | 0.0085 (18) |
| C28 | 0.094 (2) | 0.071 (2) | 0.075 (2) | −0.0136 (18) | 0.0402 (18) | −0.0158 (17) |
| C29 | 0.082 (2) | 0.082 (2) | 0.0651 (19) | 0.0154 (18) | 0.0010 (16) | −0.0035 (17) |
| C30 | 0.100 (3) | 0.076 (2) | 0.075 (2) | 0.0219 (19) | 0.0088 (19) | −0.0157 (18) |
| O1—C7 | 1.223 (8) | N12—C17 | 1.357 (6) |
| O1B—C7 | 1.234 (12) | C13—C14 | 1.379 (5) |
| N1—C6 | 1.307 (5) | C13—H13 | 0.9300 |
| N1—C2 | 1.332 (4) | C14—C15 | 1.359 (5) |
| C2—C3 | 1.371 (4) | C14—C18 | 1.465 (4) |
| C2—H2 | 0.9300 | C15—C16 | 1.358 (5) |
| C3—C4 | 1.372 (4) | C15—H15 | 0.9300 |
| C3—C7 | 1.487 (4) | C16—C17 | 1.326 (6) |
| C4—C5 | 1.385 (5) | C16—H16 | 0.9300 |
| C4—H4 | 0.9300 | C17—H17 | 0.9300 |
| C5—C6 | 1.365 (6) | C18—H18 | 0.9300 |
| C5—H5 | 0.9300 | N19—C20 | 1.316 (4) |
| C6—H6 | 0.9300 | N19—C24 | 1.332 (4) |
| C7—N8 | 1.329 (4) | C20—C21 | 1.353 (4) |
| N8—C9B | 1.495 (9) | C20—H20 | 0.9300 |
| N8—C9 | 1.495 (5) | C21—C22 | 1.384 (5) |
| N8—H8 | 0.84 (3) | C22—C23 | 1.366 (4) |
| C9—C10 | 1.520 (5) | C22—H22 | 0.9300 |
| C9—C21 | 1.556 (6) | C23—C24 | 1.348 (4) |
| C9—H9 | 0.9800 | C23—H23 | 0.9300 |
| C10—N11 | 1.483 (4) | C24—H24 | 0.9300 |
| C10—C27 | 1.561 (6) | N25—C26 | 1.302 (4) |
| C10—H10 | 0.9800 | N25—C30 | 1.314 (4) |
| C9B—C10B | 1.514 (8) | C26—C27 | 1.352 (4) |
| C9B—C27 | 1.671 (11) | C26—H26 | 0.9300 |
| C9B—H9B | 0.9800 | C27—C28 | 1.382 (5) |
| C10B—N11 | 1.526 (7) | C28—C29 | 1.368 (4) |
| C10B—C21 | 1.662 (10) | C28—H28 | 0.9300 |
| C10B—H10B | 0.9800 | C29—C30 | 1.372 (4) |
| N11—C18 | 1.242 (3) | C29—H29 | 0.9300 |
| N12—C13 | 1.354 (5) | C30—H30 | 0.9300 |
| C6—N1—C2 | 116.5 (3) | N12—C13—H13 | 118.1 |
| N1—C2—C3 | 124.0 (3) | C14—C13—H13 | 118.1 |
| N1—C2—H2 | 118.0 | C15—C14—C13 | 117.3 (3) |
| C3—C2—H2 | 118.0 | C15—C14—C18 | 122.6 (3) |
| C2—C3—C4 | 118.0 (3) | C13—C14—C18 | 120.1 (3) |
| C2—C3—C7 | 123.3 (3) | C16—C15—C14 | 120.4 (4) |
| C4—C3—C7 | 118.6 (3) | C16—C15—H15 | 119.8 |
| C3—C4—C5 | 118.8 (3) | C14—C15—H15 | 119.8 |
| C3—C4—H4 | 120.6 | C17—C16—C15 | 119.2 (4) |
| C5—C4—H4 | 120.6 | C17—C16—H16 | 120.4 |
| C6—C5—C4 | 117.7 (4) | C15—C16—H16 | 120.4 |
| C6—C5—H5 | 121.1 | C16—C17—N12 | 124.5 (4) |
| C4—C5—H5 | 121.1 | C16—C17—H17 | 117.7 |
| N1—C6—C5 | 125.0 (3) | N12—C17—H17 | 117.7 |
| N1—C6—H6 | 117.5 | N11—C18—C14 | 121.0 (3) |
| C5—C6—H6 | 117.5 | N11—C18—H18 | 119.5 |
| O1—C7—N8 | 123.4 (7) | C14—C18—H18 | 119.5 |
| O1B—C7—N8 | 116.5 (13) | C20—N19—C24 | 115.5 (3) |
| O1—C7—C3 | 116.8 (8) | N19—C20—C21 | 125.7 (3) |
| O1B—C7—C3 | 122.5 (12) | N19—C20—H20 | 117.2 |
| N8—C7—C3 | 118.6 (2) | C21—C20—H20 | 117.2 |
| C7—N8—C9B | 119.2 (4) | C20—C21—C22 | 117.0 (3) |
| C7—N8—C9 | 119.7 (3) | C20—C21—C9 | 114.4 (3) |
| C7—N8—H8 | 123 (2) | C22—C21—C9 | 127.7 (3) |
| C9B—N8—H8 | 113 (2) | C20—C21—C10B | 130.0 (4) |
| C9—N8—H8 | 116 (2) | C22—C21—C10B | 104.0 (4) |
| N8—C9—C10 | 108.1 (3) | C23—C22—C21 | 119.0 (3) |
| N8—C9—C21 | 117.0 (3) | C23—C22—H22 | 120.5 |
| C10—C9—C21 | 108.7 (4) | C21—C22—H22 | 120.5 |
| N8—C9—H9 | 107.6 | C24—C23—C22 | 118.5 (3) |
| C10—C9—H9 | 107.6 | C24—C23—H23 | 120.7 |
| C21—C9—H9 | 107.6 | C22—C23—H23 | 120.7 |
| N11—C10—C9 | 104.1 (3) | N19—C24—C23 | 124.3 (3) |
| N11—C10—C27 | 115.5 (3) | N19—C24—H24 | 117.8 |
| C9—C10—C27 | 106.1 (4) | C23—C24—H24 | 117.8 |
| N11—C10—H10 | 110.3 | C26—N25—C30 | 115.6 (3) |
| C9—C10—H10 | 110.3 | N25—C26—C27 | 126.5 (3) |
| C27—C10—H10 | 110.3 | N25—C26—H26 | 116.8 |
| N8—C9B—C10B | 105.6 (6) | C27—C26—H26 | 116.8 |
| N8—C9B—C27 | 120.2 (6) | C26—C27—C28 | 117.0 (3) |
| C10B—C9B—C27 | 98.0 (7) | C26—C27—C10 | 113.9 (3) |
| N8—C9B—H9B | 110.7 | C28—C27—C10 | 128.2 (3) |
| C10B—C9B—H9B | 110.7 | C26—C27—C9B | 131.9 (4) |
| C27—C9B—H9B | 110.7 | C28—C27—C9B | 100.9 (4) |
| C9B—C10B—N11 | 103.0 (6) | C10—C27—C9B | 46.6 (3) |
| C9B—C10B—C21 | 98.5 (7) | C29—C28—C27 | 118.6 (3) |
| N11—C10B—C21 | 119.5 (6) | C29—C28—H28 | 120.7 |
| C9B—C10B—H10B | 111.5 | C27—C28—H28 | 120.7 |
| N11—C10B—H10B | 111.5 | C28—C29—C30 | 118.1 (3) |
| C21—C10B—H10B | 111.5 | C28—C29—H29 | 121.0 |
| C18—N11—C10 | 117.8 (3) | C30—C29—H29 | 121.0 |
| C18—N11—C10B | 118.0 (4) | N25—C30—C29 | 124.3 (3) |
| C13—N12—C17 | 114.7 (4) | N25—C30—H30 | 117.9 |
| N12—C13—C14 | 123.8 (4) | C29—C30—H30 | 117.9 |
| H··· | ||||
| N8—H8···N25i | 0.84 (3) | 2.33 (3) | 3.168 (4) | 174 (3) |
| C28—H28···O1ii | 0.93 | 2.25 | 3.163 (16) | 169 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N8—H8⋯N25i | 0.84 (3) | 2.33 (3) | 3.168 (4) | 174 (3) |
| C28—H28⋯O1ii | 0.93 | 2.25 | 3.163 (16) | 169 |
Symmetry codes: (i) ; (ii) .