Literature DB >> 23723819

2-(2,4-Di-chloro-phen-yl)-N-(1,3-thia-zol-2-yl)acetamide.

Prakash S Nayak1, B Narayana, H S Yathirajan, Jerry P Jasinski, Ray J Butcher.   

Abstract

In the title compound, C11H8Cl2N2OS, the mean plane of the di-chloro-phenyl ring is twisted by 72.4 (1)° from that of the thia-zole ring. In the crystal, mol-ecules are linked via pairs of N-H⋯N hydrogen bonds with an R 2 (2)(8) graph-set motif and weak C-H⋯O inter-actions, forming inversion dimers which stack along the c-axis direction.

Entities:  

Year:  2013        PMID: 23723819      PMCID: PMC3647853          DOI: 10.1107/S1600536813008532

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structural similarity of N-substituted 2-aryl­acetamides to the lateral chain of natural benzyl­penicillin, see: Mijin & Marinkovic (2006 ▶); Mijin et al. (2008 ▶). For the coordination abilities of amides, see: Wu et al. (2008 ▶, 2010 ▶). For related structures, see: Fun et al. (2012a ▶,b ▶,c ▶,d ▶,e ▶); Butcher et al. (2013a ▶,b ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C11H8Cl2N2OS M = 287.15 Triclinic, a = 5.3262 (2) Å b = 10.5083 (4) Å c = 10.8096 (4) Å α = 83.900 (3)° β = 86.301 (3)° γ = 87.279 (4)° V = 599.83 (4) Å3 Z = 2 Mo Kα radiation μ = 0.70 mm−1 T = 123 K 0.35 × 0.25 × 0.12 mm

Data collection

Agilent Xcalibur (Ruby, Gemini) diffractometer Absorption correction: multi-scan (CrysAlis PRO and CrysAlis RED; Agilent, 2012 ▶) T min = 0.873, T max = 1.000 10769 measured reflections 6006 independent reflections 4329 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.112 S = 1.07 6006 reflections 154 parameters H-atom parameters constrained Δρmax = 0.65 e Å−3 Δρmin = −0.36 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813008532/hg5302sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813008532/hg5302Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813008532/hg5302Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H8Cl2N2OSZ = 2
Mr = 287.15F(000) = 292
Triclinic, P1Dx = 1.590 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.3262 (2) ÅCell parameters from 4451 reflections
b = 10.5083 (4) Åθ = 3.8–37.4°
c = 10.8096 (4) ŵ = 0.70 mm1
α = 83.900 (3)°T = 123 K
β = 86.301 (3)°Prism, colorless
γ = 87.279 (4)°0.35 × 0.25 × 0.12 mm
V = 599.83 (4) Å3
Agilent Xcalibur (Ruby, Gemini) diffractometer6006 independent reflections
Radiation source: Enhance (Mo) X-ray Source4329 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
Detector resolution: 10.5081 pixels mm-1θmax = 37.5°, θmin = 3.8°
ω scansh = −8→8
Absorption correction: multi-scan (CrysAlis PRO and CrysAlis RED; Agilent, 2012)k = −17→17
Tmin = 0.873, Tmax = 1.000l = −18→11
10769 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.112H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0402P)2] where P = (Fo2 + 2Fc2)/3
6006 reflections(Δ/σ)max = 0.001
154 parametersΔρmax = 0.65 e Å3
0 restraintsΔρmin = −0.36 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.79895 (7)0.48741 (3)0.89686 (3)0.02461 (8)
Cl20.55890 (9)0.83944 (4)0.52220 (4)0.03766 (11)
S11.04354 (7)0.01947 (3)0.74851 (3)0.02147 (8)
O10.79783 (18)0.25361 (10)0.71093 (9)0.0215 (2)
N10.6082 (2)0.11595 (11)0.86027 (10)0.0186 (2)
H1A0.47590.10390.91260.022*
N20.7798 (2)−0.08345 (11)0.93865 (10)0.0192 (2)
C10.4325 (2)0.45348 (12)0.74111 (11)0.0171 (2)
C20.6152 (2)0.53376 (12)0.77059 (11)0.0174 (2)
C30.6586 (3)0.65234 (13)0.70372 (12)0.0206 (3)
H3A0.78760.70450.72420.025*
C40.5064 (3)0.69139 (13)0.60622 (12)0.0217 (3)
C50.3151 (3)0.61785 (14)0.57565 (12)0.0222 (3)
H5A0.20960.64780.51020.027*
C60.2813 (3)0.49878 (13)0.64318 (12)0.0199 (2)
H6A0.15220.44690.62230.024*
C70.3992 (2)0.32251 (13)0.80963 (12)0.0191 (2)
H7A0.24540.28660.78290.023*
H7B0.37450.33060.90010.023*
C80.6212 (2)0.23051 (12)0.78742 (11)0.0166 (2)
C90.7900 (2)0.01826 (12)0.85656 (11)0.0170 (2)
C101.1457 (3)−0.12670 (14)0.81987 (13)0.0237 (3)
H10A1.2938−0.17340.79450.028*
C110.9844 (3)−0.16548 (13)0.91734 (13)0.0216 (3)
H11A1.0106−0.24410.96780.026*
U11U22U33U12U13U23
Cl10.02368 (17)0.02474 (17)0.02565 (16)0.00123 (13)−0.00852 (12)−0.00047 (12)
Cl20.0557 (3)0.02104 (18)0.03370 (19)−0.00763 (18)−0.00098 (18)0.01074 (15)
S10.02054 (16)0.02107 (16)0.02141 (15)0.00019 (13)0.00441 (12)0.00039 (12)
O10.0212 (5)0.0200 (5)0.0211 (4)0.0003 (4)0.0032 (4)0.0045 (4)
N10.0157 (5)0.0160 (5)0.0220 (5)0.0006 (4)0.0036 (4)0.0045 (4)
N20.0183 (5)0.0156 (5)0.0224 (5)0.0004 (4)0.0010 (4)0.0023 (4)
C10.0153 (5)0.0155 (5)0.0193 (5)0.0004 (4)0.0007 (4)0.0018 (4)
C20.0164 (5)0.0166 (5)0.0189 (5)0.0014 (4)−0.0016 (4)−0.0002 (4)
C30.0206 (6)0.0169 (6)0.0238 (6)−0.0017 (5)0.0011 (5)−0.0008 (5)
C40.0277 (7)0.0154 (6)0.0201 (5)0.0007 (5)0.0041 (5)0.0024 (4)
C50.0255 (7)0.0208 (6)0.0191 (5)0.0030 (5)−0.0022 (5)0.0023 (5)
C60.0180 (6)0.0197 (6)0.0218 (5)−0.0002 (5)−0.0026 (4)0.0002 (5)
C70.0169 (6)0.0158 (5)0.0231 (6)−0.0005 (5)0.0009 (4)0.0036 (4)
C80.0178 (6)0.0148 (5)0.0170 (5)−0.0013 (4)−0.0026 (4)0.0012 (4)
C90.0155 (5)0.0165 (5)0.0185 (5)−0.0015 (4)0.0003 (4)0.0002 (4)
C100.0206 (6)0.0205 (6)0.0291 (6)0.0041 (5)0.0020 (5)−0.0027 (5)
C110.0218 (6)0.0166 (6)0.0256 (6)0.0008 (5)−0.0007 (5)0.0002 (5)
Cl1—C21.7445 (12)C2—C31.3939 (17)
Cl2—C41.7412 (13)C3—C41.3866 (19)
S1—C101.7243 (14)C3—H3A0.9500
S1—C91.7272 (13)C4—C51.384 (2)
O1—C81.2274 (15)C5—C61.3933 (18)
N1—C81.3687 (15)C5—H5A0.9500
N1—C91.3794 (17)C6—H6A0.9500
N1—H1A0.8800C7—C81.5148 (19)
N2—C91.3155 (15)C7—H7A0.9900
N2—C111.3799 (18)C7—H7B0.9900
C1—C21.3912 (19)C10—C111.3563 (19)
C1—C61.4009 (17)C10—H10A0.9500
C1—C71.5046 (17)C11—H11A0.9500
C10—S1—C988.73 (6)C5—C6—H6A119.1
C8—N1—C9123.92 (11)C1—C6—H6A119.1
C8—N1—H1A118.0C1—C7—C8113.05 (10)
C9—N1—H1A118.0C1—C7—H7A109.0
C9—N2—C11109.73 (11)C8—C7—H7A109.0
C2—C1—C6117.23 (11)C1—C7—H7B109.0
C2—C1—C7121.89 (11)C8—C7—H7B109.0
C6—C1—C7120.88 (12)H7A—C7—H7B107.8
C1—C2—C3122.75 (12)O1—C8—N1121.81 (12)
C1—C2—Cl1119.76 (9)O1—C8—C7124.30 (11)
C3—C2—Cl1117.49 (10)N1—C8—C7113.88 (10)
C4—C3—C2117.54 (13)N2—C9—N1120.68 (11)
C4—C3—H3A121.2N2—C9—S1115.46 (10)
C2—C3—H3A121.2N1—C9—S1123.86 (9)
C5—C4—C3122.29 (12)C11—C10—S1110.33 (11)
C5—C4—Cl2119.82 (10)C11—C10—H10A124.8
C3—C4—Cl2117.89 (11)S1—C10—H10A124.8
C4—C5—C6118.37 (12)C10—C11—N2115.75 (12)
C4—C5—H5A120.8C10—C11—H11A122.1
C6—C5—H5A120.8N2—C11—H11A122.1
C5—C6—C1121.75 (13)
C6—C1—C2—C3−2.9 (2)C6—C1—C7—C8112.46 (14)
C7—C1—C2—C3176.27 (13)C9—N1—C8—O11.1 (2)
C6—C1—C2—Cl1176.52 (10)C9—N1—C8—C7−179.52 (12)
C7—C1—C2—Cl1−4.33 (19)C1—C7—C8—O1−8.1 (2)
C1—C2—C3—C41.7 (2)C1—C7—C8—N1172.59 (11)
Cl1—C2—C3—C4−177.67 (11)C11—N2—C9—N1−178.62 (12)
C2—C3—C4—C50.9 (2)C11—N2—C9—S10.80 (15)
C2—C3—C4—Cl2179.95 (11)C8—N1—C9—N2172.32 (12)
C3—C4—C5—C6−2.1 (2)C8—N1—C9—S1−7.0 (2)
Cl2—C4—C5—C6178.79 (11)C10—S1—C9—N2−0.69 (11)
C4—C5—C6—C10.9 (2)C10—S1—C9—N1178.71 (13)
C2—C1—C6—C51.5 (2)C9—S1—C10—C110.35 (12)
C7—C1—C6—C5−177.65 (13)S1—C10—C11—N20.02 (18)
C2—C1—C7—C8−66.66 (17)C9—N2—C11—C10−0.52 (19)
D—H···AD—HH···AD···AD—H···A
C5—H5A···O1i0.952.503.3253 (15)145
N1—H1A···N2ii0.882.042.9052 (15)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5A⋯O1i 0.952.503.3253 (15)145
N1—H1A⋯N2ii 0.882.042.9052 (15)168

Symmetry codes: (i) ; (ii) .

  9 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-(2,4-Dichloro-phen-yl)-N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)acetamide.

Authors:  Ray J Butcher; Aneeka Mahan; P S Nayak; B Narayana; H S Yathirajan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-12-08

3.  Aqua-[N-phenyl-2-(quinolin-8-yl-oxy)acetamide]dinitratozinc(II).

Authors:  Wei-Na Wu; Yuan Wang; Ai-Yun Zhang; Rui-Qi Zhao; Qiu-Fen Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-13

4.  2,2-Diphenyl-N-(1,3-thia-zol-2-yl)acetamide.

Authors:  Hoong-Kun Fun; Chin Wei Ooi; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-06

5.  2-(4-Chloro-phen-yl)-N-(1,3-thia-zol-2-yl)acetamide.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-11

6.  2-(Naphthalen-1-yl)-N-(1,3-thia-zol-2-yl)acetamide.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-18

7.  N-(1,3-Thia-zol-2-yl)-2-(2,4,6-trimethyl-phen-yl)acetamide.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-18

8.  2-(2-Fluoro-phen-yl)-N-(1,3-thia-zol-2-yl)acetamide.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-28

9.  2-(2,6-Dichloro-phen-yl)-N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)acetamide.

Authors:  Ray J Butcher; Aneeka Mahan; P S Nayak; B Narayana; H S Yathirajan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-12-08
  9 in total

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