| Literature DB >> 23723776 |
Yong Yang1, Ning Wang, Lin Chen.
Abstract
The title compound, [Fe2(C7H6S3)(CO)6], was prepared as a biomimic for the active site of [FeFe]-hydrogenases. The central Fe2S2 core is in a butterfly conformation and each Fe(I) atom has a pseudo-square-pyramidal coordination by three O atoms and two S atoms. The Fe-Fe distance is 2.471 (2) Å and the dihedral angle between the two Fe-S-Fe planes is 78.96 (7)°. The least-squares plane through the -S(C7H6S)S- bridge nearly bis-ects the mol-ecular structure: except for the two Fe(CO)3 units, all atoms are in this plane with an average deviation from the plane of 0.028 (3) Å. In the crystal, the mol-ecules are linked into chains along [001] by C-H⋯π(arene) inter-actions.Entities:
Year: 2013 PMID: 23723776 PMCID: PMC3647810 DOI: 10.1107/S1600536813009860
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Fe2(C7H6S3)(CO)6] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2629 reflections |
| θ = 2.5–27.1° | |
| µ = 2.08 mm−1 | |
| β = 92.055 (13)° | Block, red |
| 0.39 × 0.24 × 0.08 mm | |
| Bruker APEXII CCD diffractometer | 3024 independent reflections |
| Radiation source: fine-focus sealed tube | 2098 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 25.0°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 8260 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3024 reflections | (Δ/σ)max < 0.001 |
| 217 parameters | Δρmax = 0.44 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Fe1 | 0.17590 (2) | 0.29795 (7) | 0.64150 (4) | 0.04642 (17) | |
| Fe2 | 0.18906 (3) | 0.54555 (7) | 0.52941 (4) | 0.04814 (18) | |
| S3 | 0.46296 (5) | 0.53167 (12) | 0.73543 (7) | 0.0462 (2) | |
| S2 | 0.22860 (5) | 0.28468 (12) | 0.48479 (7) | 0.0475 (2) | |
| S1 | 0.27674 (5) | 0.48911 (12) | 0.66349 (7) | 0.0446 (2) | |
| C8 | 0.35707 (16) | 0.3899 (4) | 0.5983 (2) | 0.0354 (7) | |
| C10 | 0.3893 (2) | 0.2051 (4) | 0.4606 (3) | 0.0481 (9) | |
| H10A | 0.3730 | 0.1375 | 0.4055 | 0.058* | |
| C2 | 0.0831 (2) | 0.2118 (5) | 0.5909 (3) | 0.0560 (10) | |
| C9 | 0.33421 (18) | 0.2915 (4) | 0.5159 (3) | 0.0401 (8) | |
| C5 | 0.1075 (2) | 0.5260 (5) | 0.4373 (4) | 0.0605 (11) | |
| C1 | 0.21760 (19) | 0.1120 (6) | 0.6991 (3) | 0.0564 (10) | |
| C7 | 0.43793 (17) | 0.4062 (4) | 0.6280 (3) | 0.0377 (8) | |
| C11 | 0.4698 (2) | 0.2221 (5) | 0.4897 (3) | 0.0514 (9) | |
| H11A | 0.5086 | 0.1648 | 0.4535 | 0.062* | |
| C12 | 0.49397 (19) | 0.3216 (4) | 0.5709 (3) | 0.0449 (9) | |
| H12A | 0.5488 | 0.3324 | 0.5879 | 0.054* | |
| O2 | 0.02428 (15) | 0.1593 (4) | 0.5570 (3) | 0.0859 (10) | |
| O1 | 0.24308 (17) | −0.0076 (4) | 0.7338 (3) | 0.0867 (11) | |
| C4 | 0.2506 (2) | 0.6882 (6) | 0.4606 (4) | 0.0700 (12) | |
| O5 | 0.05695 (18) | 0.5075 (4) | 0.3771 (3) | 0.0918 (11) | |
| O6 | 0.09707 (19) | 0.7802 (4) | 0.6518 (3) | 0.0961 (12) | |
| O4 | 0.2905 (2) | 0.7821 (5) | 0.4201 (3) | 0.1088 (13) | |
| O3 | 0.09360 (19) | 0.4359 (5) | 0.8164 (3) | 0.0994 (12) | |
| C6 | 0.1338 (2) | 0.6903 (5) | 0.6042 (4) | 0.0643 (12) | |
| C3 | 0.1254 (2) | 0.3805 (6) | 0.7494 (4) | 0.0631 (11) | |
| C13 | 0.57037 (19) | 0.5072 (4) | 0.7506 (3) | 0.0543 (10) | |
| H13A | 0.5900 | 0.5721 | 0.8082 | 0.082* | |
| H13B | 0.5956 | 0.5454 | 0.6897 | 0.082* | |
| H13C | 0.5831 | 0.3911 | 0.7619 | 0.082* |
| Fe1 | 0.0379 (3) | 0.0561 (4) | 0.0452 (3) | −0.0011 (2) | 0.0000 (2) | 0.0002 (3) |
| Fe2 | 0.0429 (3) | 0.0491 (4) | 0.0522 (4) | 0.0050 (2) | −0.0029 (2) | −0.0011 (3) |
| S3 | 0.0421 (4) | 0.0487 (6) | 0.0479 (6) | −0.0040 (4) | 0.0011 (4) | −0.0067 (5) |
| S2 | 0.0480 (4) | 0.0519 (6) | 0.0422 (6) | −0.0004 (4) | −0.0046 (4) | −0.0077 (5) |
| S1 | 0.0379 (4) | 0.0538 (6) | 0.0423 (6) | 0.0033 (4) | 0.0016 (4) | −0.0123 (4) |
| C8 | 0.0392 (15) | 0.036 (2) | 0.0313 (19) | 0.0026 (15) | 0.0060 (13) | −0.0023 (16) |
| C10 | 0.061 (2) | 0.046 (2) | 0.038 (2) | 0.0035 (18) | 0.0044 (17) | −0.0051 (18) |
| C2 | 0.052 (2) | 0.058 (3) | 0.057 (3) | 0.0055 (19) | −0.0012 (18) | 0.002 (2) |
| C9 | 0.0433 (16) | 0.040 (2) | 0.037 (2) | 0.0048 (15) | 0.0035 (14) | 0.0003 (17) |
| C5 | 0.052 (2) | 0.061 (3) | 0.068 (3) | 0.0124 (19) | −0.001 (2) | −0.002 (2) |
| C1 | 0.0372 (17) | 0.070 (3) | 0.061 (3) | −0.0023 (19) | −0.0012 (17) | −0.001 (2) |
| C7 | 0.0405 (16) | 0.0300 (19) | 0.043 (2) | −0.0003 (14) | 0.0051 (14) | 0.0067 (16) |
| C11 | 0.056 (2) | 0.050 (2) | 0.050 (3) | 0.0106 (18) | 0.0194 (17) | 0.003 (2) |
| C12 | 0.0416 (17) | 0.046 (2) | 0.048 (2) | 0.0045 (16) | 0.0079 (15) | 0.0058 (19) |
| O2 | 0.0549 (15) | 0.087 (2) | 0.115 (3) | −0.0205 (15) | −0.0156 (17) | −0.004 (2) |
| O1 | 0.0665 (18) | 0.085 (2) | 0.108 (3) | 0.0094 (17) | −0.0127 (18) | 0.028 (2) |
| C4 | 0.062 (2) | 0.069 (3) | 0.079 (3) | 0.006 (2) | −0.005 (2) | 0.006 (3) |
| O5 | 0.0720 (19) | 0.109 (3) | 0.092 (3) | 0.0123 (17) | −0.034 (2) | −0.008 (2) |
| O6 | 0.083 (2) | 0.088 (3) | 0.117 (3) | 0.0311 (18) | −0.0015 (19) | −0.043 (2) |
| O4 | 0.101 (2) | 0.096 (3) | 0.130 (4) | −0.025 (2) | 0.021 (2) | 0.030 (3) |
| O3 | 0.087 (2) | 0.145 (3) | 0.068 (3) | 0.028 (2) | 0.0250 (19) | −0.007 (2) |
| C6 | 0.048 (2) | 0.064 (3) | 0.080 (3) | 0.004 (2) | −0.011 (2) | −0.005 (3) |
| C3 | 0.0422 (19) | 0.087 (3) | 0.060 (3) | 0.005 (2) | 0.0038 (19) | 0.007 (3) |
| C13 | 0.0432 (18) | 0.055 (3) | 0.064 (3) | −0.0049 (16) | −0.0044 (17) | −0.001 (2) |
| Fe1—C1 | 1.789 (5) | C8—C9 | 1.373 (4) |
| Fe1—C2 | 1.786 (4) | C10—C9 | 1.368 (5) |
| Fe1—C3 | 1.788 (5) | C10—C11 | 1.378 (5) |
| Fe1—Fe2 | 2.471 (2) | C10—H10A | 0.9300 |
| Fe1—S1 | 2.2695 (19) | C11—C12 | 1.372 (5) |
| Fe1—S2 | 2.253 (2) | C11—H11A | 0.9300 |
| Fe2—C4 | 1.789 (5) | C12—H12A | 0.9300 |
| Fe2—C5 | 1.781 (4) | C13—H13A | 0.9600 |
| Fe2—C6 | 1.784 (5) | C13—H13B | 0.9600 |
| Fe2—S1 | 2.2763 (19) | C13—H13C | 0.9600 |
| Fe2—S2 | 2.263 (2) | O3—C3 | 1.127 (5) |
| C1—O1 | 1.131 (4) | O6—C6 | 1.139 (5) |
| C2—O2 | 1.133 (4) | S1—C8 | 1.787 (3) |
| C4—O4 | 1.140 (5) | S2—C9 | 1.779 (3) |
| C5—O5 | 1.135 (5) | S3—C7 | 1.759 (4) |
| C7—C12 | 1.385 (5) | S3—C13 | 1.790 (4) |
| C8—C7 | 1.385 (4) | ||
| C2—Fe1—C3 | 90.77 (19) | C8—S1—Fe1 | 101.39 (13) |
| C2—Fe1—C1 | 98.59 (17) | C8—S1—Fe2 | 100.67 (13) |
| C3—Fe1—C1 | 99.1 (2) | Fe1—S1—Fe2 | 65.86 (5) |
| C2—Fe1—S2 | 90.09 (15) | C9—C8—C7 | 120.6 (3) |
| C3—Fe1—S2 | 159.76 (15) | C9—C8—S1 | 115.9 (2) |
| C1—Fe1—S2 | 100.74 (14) | C7—C8—S1 | 123.4 (2) |
| C2—Fe1—S1 | 157.30 (13) | C9—C10—C11 | 117.3 (3) |
| C3—Fe1—S1 | 90.84 (14) | C9—C10—H10A | 121.3 |
| C1—Fe1—S1 | 103.50 (13) | C11—C10—H10A | 121.3 |
| S2—Fe1—S1 | 80.80 (5) | O2—C2—Fe1 | 178.5 (4) |
| C2—Fe1—Fe2 | 100.45 (13) | C10—C9—C8 | 122.1 (3) |
| C3—Fe1—Fe2 | 103.00 (16) | C10—C9—S2 | 122.0 (3) |
| C1—Fe1—Fe2 | 150.44 (12) | C8—C9—S2 | 115.9 (2) |
| S2—Fe1—Fe2 | 57.01 (5) | O5—C5—Fe2 | 177.1 (4) |
| S1—Fe1—Fe2 | 57.20 (5) | O1—C1—Fe1 | 178.4 (4) |
| C5—Fe2—C6 | 92.06 (19) | C8—C7—C12 | 117.4 (3) |
| C5—Fe2—C4 | 98.5 (2) | C8—C7—S3 | 118.3 (2) |
| C6—Fe2—C4 | 100.1 (2) | C12—C7—S3 | 124.3 (2) |
| C5—Fe2—S2 | 87.98 (13) | C12—C11—C10 | 121.5 (3) |
| C6—Fe2—S2 | 153.34 (15) | C12—C11—H11A | 119.3 |
| C4—Fe2—S2 | 106.31 (16) | C10—C11—H11A | 119.3 |
| C5—Fe2—S1 | 161.32 (14) | C11—C12—C7 | 121.0 (3) |
| C6—Fe2—S1 | 91.81 (15) | C11—C12—H12A | 119.5 |
| C4—Fe2—S1 | 98.82 (15) | C7—C12—H12A | 119.5 |
| S2—Fe2—S1 | 80.45 (5) | O4—C4—Fe2 | 177.5 (5) |
| C5—Fe2—Fe1 | 104.41 (14) | O6—C6—Fe2 | 178.4 (4) |
| C6—Fe2—Fe1 | 97.78 (16) | O3—C3—Fe1 | 178.5 (5) |
| C4—Fe2—Fe1 | 150.30 (13) | S3—C13—H13A | 109.5 |
| S2—Fe2—Fe1 | 56.64 (3) | S3—C13—H13B | 109.5 |
| S1—Fe2—Fe1 | 56.94 (5) | H13A—C13—H13B | 109.5 |
| C7—S3—C13 | 103.30 (16) | S3—C13—H13C | 109.5 |
| C9—S2—Fe1 | 101.52 (13) | H13A—C13—H13C | 109.5 |
| C9—S2—Fe2 | 101.73 (12) | H13B—C13—H13C | 109.5 |
| Fe1—S2—Fe2 | 66.35 (4) |
| H··· | ||||
| C13—H13 | 0.96 | 2.69 | 3.590 (5) | 157 |
Selected bond lengths (Å)
| Fe1—C1 | 1.789 (5) |
| Fe1—C2 | 1.786 (4) |
| Fe1—C3 | 1.788 (5) |
| Fe1—S1 | 2.2695 (19) |
| Fe1—S2 | 2.253 (2) |
| Fe2—C4 | 1.789 (5) |
| Fe2—C5 | 1.781 (4) |
| Fe2—C6 | 1.784 (5) |
| Fe2—S1 | 2.2763 (19) |
| Fe2—S2 | 2.263 (2) |
C—H⋯π(arene) interaction geometry (Å, °)
Cg1 is the centroid of the C7–C12 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C13—H13 | 0.96 | 2.69 | 3.590 (5) | 157 |
Symmetry code: (i) .