| Literature DB >> 23723772 |
Mohammed A S Omer1, Jia-Cheng Liu.
Abstract
In the title complex, [Ni(NO3)2(C14H16N6O2)]·H2O, the Ni(II) atom, lying on a twofold rotation axis, is coordinated by aEntities:
Year: 2013 PMID: 23723772 PMCID: PMC3647806 DOI: 10.1107/S1600536813009355
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(NO3)2(C14H16N6O2)]·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 2097 reflections |
| θ = 2.5–23.4° | |
| µ = 1.06 mm−1 | |
| β = 113.427 (3)° | Block, brown |
| 0.23 × 0.21 × 0.19 mm | |
| Bruker APEXII CCD diffractometer | 1828 independent reflections |
| Radiation source: fine-focus sealed tube | 1515 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 25.5°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 6930 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1828 reflections | (Δ/σ)max < 0.001 |
| 151 parameters | Δρmax = 0.26 e Å−3 |
| 1 restraint | Δρmin = −0.23 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ni1 | 0.0000 | 0.22687 (3) | 0.2500 | 0.02616 (14) | |
| C1 | 0.11963 (16) | 0.08324 (15) | 0.4745 (4) | 0.0364 (6) | |
| H1 | 0.0798 | 0.0464 | 0.3947 | 0.044* | |
| C2 | 0.19290 (17) | 0.05229 (17) | 0.6107 (4) | 0.0461 (7) | |
| H2 | 0.2022 | −0.0043 | 0.6214 | 0.055* | |
| C3 | 0.23627 (16) | 0.18666 (15) | 0.7095 (3) | 0.0352 (6) | |
| H3A | 0.2760 | 0.2238 | 0.7884 | 0.042* | |
| C4 | 0.16163 (14) | 0.21473 (14) | 0.5717 (3) | 0.0282 (5) | |
| C5 | 0.13925 (15) | 0.30501 (15) | 0.5473 (3) | 0.0308 (5) | |
| C6 | 0.19245 (18) | 0.36564 (17) | 0.6900 (4) | 0.0528 (8) | |
| H6A | 0.1707 | 0.4202 | 0.6515 | 0.079* | |
| H6B | 0.2507 | 0.3625 | 0.7015 | 0.079* | |
| H6C | 0.1902 | 0.3533 | 0.8091 | 0.079* | |
| C7 | 0.03112 (17) | 0.40247 (15) | 0.3526 (4) | 0.0397 (6) | |
| H7A | 0.0746 | 0.4444 | 0.3731 | 0.048* | |
| H7B | 0.0006 | 0.4150 | 0.4319 | 0.048* | |
| H1W | 0.961 (7) | 0.337 (9) | 0.670 (19) | 0.65 (10)* | |
| N1 | 0.10253 (12) | 0.16371 (12) | 0.4506 (3) | 0.0289 (5) | |
| N2 | 0.25192 (14) | 0.10433 (13) | 0.7301 (3) | 0.0437 (6) | |
| N3 | 0.07187 (12) | 0.32112 (11) | 0.4021 (3) | 0.0302 (5) | |
| N4 | −0.08220 (14) | 0.16354 (17) | 0.4974 (3) | 0.0462 (6) | |
| O1 | 0.32056 (13) | 0.07731 (13) | 0.8616 (3) | 0.0739 (7) | |
| O2 | −0.06595 (11) | 0.22970 (11) | 0.4291 (2) | 0.0413 (4) | |
| O3 | −0.11896 (19) | 0.16980 (18) | 0.6043 (4) | 0.0997 (10) | |
| O4 | −0.06439 (14) | 0.09594 (13) | 0.4506 (3) | 0.0603 (6) | |
| O5 | 1.0000 | 0.3575 (3) | 0.7500 | 0.0993 (13) |
| Ni1 | 0.0253 (2) | 0.0206 (2) | 0.0280 (2) | 0.000 | 0.00583 (18) | 0.000 |
| C1 | 0.0348 (14) | 0.0261 (14) | 0.0407 (14) | −0.0021 (11) | 0.0071 (12) | 0.0025 (11) |
| C2 | 0.0413 (16) | 0.0265 (14) | 0.0576 (18) | 0.0033 (12) | 0.0059 (14) | 0.0085 (13) |
| C3 | 0.0284 (14) | 0.0325 (14) | 0.0376 (14) | −0.0053 (11) | 0.0055 (11) | 0.0030 (11) |
| C4 | 0.0262 (12) | 0.0287 (13) | 0.0288 (12) | −0.0019 (10) | 0.0100 (10) | 0.0012 (10) |
| C5 | 0.0292 (14) | 0.0282 (13) | 0.0336 (13) | −0.0052 (11) | 0.0110 (11) | −0.0025 (10) |
| C6 | 0.0490 (18) | 0.0387 (17) | 0.0501 (17) | −0.0044 (14) | −0.0021 (14) | −0.0097 (14) |
| C7 | 0.0454 (17) | 0.0208 (13) | 0.0458 (15) | 0.0011 (11) | 0.0106 (13) | −0.0029 (11) |
| N1 | 0.0278 (11) | 0.0226 (10) | 0.0336 (11) | −0.0015 (9) | 0.0092 (9) | 0.0011 (9) |
| N2 | 0.0331 (13) | 0.0363 (13) | 0.0476 (13) | 0.0022 (10) | 0.0011 (11) | 0.0110 (10) |
| N3 | 0.0330 (12) | 0.0218 (11) | 0.0330 (11) | −0.0011 (9) | 0.0102 (10) | −0.0021 (9) |
| N4 | 0.0339 (13) | 0.0634 (17) | 0.0408 (13) | −0.0025 (12) | 0.0144 (11) | 0.0077 (12) |
| O1 | 0.0487 (13) | 0.0509 (14) | 0.0815 (16) | 0.0081 (11) | −0.0169 (12) | 0.0172 (12) |
| O2 | 0.0453 (11) | 0.0378 (10) | 0.0453 (10) | 0.0033 (9) | 0.0226 (9) | 0.0051 (9) |
| O3 | 0.118 (2) | 0.125 (2) | 0.100 (2) | 0.0031 (19) | 0.090 (2) | 0.0153 (17) |
| O4 | 0.0714 (15) | 0.0405 (12) | 0.0721 (15) | −0.0098 (11) | 0.0319 (12) | 0.0052 (11) |
| O5 | 0.126 (4) | 0.113 (3) | 0.068 (2) | 0.000 | 0.047 (2) | 0.000 |
| Ni1—N3 | 2.0183 (19) | C5—C6 | 1.488 (3) |
| Ni1—N1 | 2.0855 (19) | C6—H6A | 0.9600 |
| Ni1—O2 | 2.1032 (17) | C6—H6B | 0.9600 |
| C1—N1 | 1.334 (3) | C6—H6C | 0.9600 |
| C1—C2 | 1.368 (3) | C7—N3 | 1.468 (3) |
| C1—H1 | 0.9300 | C7—C7i | 1.521 (5) |
| C2—N2 | 1.355 (3) | C7—H7A | 0.9700 |
| C2—H2 | 0.9300 | C7—H7B | 0.9700 |
| C3—N2 | 1.358 (3) | N2—O1 | 1.283 (3) |
| C3—C4 | 1.371 (3) | N4—O3 | 1.224 (3) |
| C3—H3A | 0.9300 | N4—O4 | 1.230 (3) |
| C4—N1 | 1.351 (3) | N4—O2 | 1.275 (3) |
| C4—C5 | 1.506 (3) | O5—H1W | 0.780 (5) |
| C5—N3 | 1.274 (3) | ||
| N3—Ni1—N3i | 81.53 (11) | N3—C5—C4 | 113.8 (2) |
| N3—Ni1—N1i | 160.01 (8) | C6—C5—C4 | 120.1 (2) |
| N3i—Ni1—N1i | 78.71 (8) | C5—C6—H6A | 109.5 |
| N3—Ni1—N1 | 78.71 (8) | C5—C6—H6B | 109.5 |
| N3i—Ni1—N1 | 160.01 (8) | H6A—C6—H6B | 109.5 |
| N1i—Ni1—N1 | 121.17 (11) | C5—C6—H6C | 109.5 |
| N3—Ni1—O2i | 90.67 (7) | H6A—C6—H6C | 109.5 |
| N3i—Ni1—O2i | 87.44 (7) | H6B—C6—H6C | 109.5 |
| N1i—Ni1—O2i | 91.42 (7) | N3—C7—C7i | 109.44 (14) |
| N1—Ni1—O2i | 89.81 (7) | N3—C7—H7A | 109.8 |
| N3—Ni1—O2 | 87.44 (7) | C7i—C7—H7A | 109.8 |
| N3i—Ni1—O2 | 90.67 (7) | N3—C7—H7B | 109.8 |
| N1i—Ni1—O2 | 89.81 (7) | C7i—C7—H7B | 109.8 |
| N1—Ni1—O2 | 91.42 (7) | H7A—C7—H7B | 108.2 |
| O2i—Ni1—O2 | 177.50 (10) | C1—N1—C4 | 116.2 (2) |
| N1—C1—C2 | 123.2 (2) | C1—N1—Ni1 | 130.95 (16) |
| N1—C1—H1 | 118.4 | C4—N1—Ni1 | 112.79 (15) |
| C2—C1—H1 | 118.4 | O1—N2—C2 | 121.5 (2) |
| N2—C2—C1 | 119.9 (2) | O1—N2—C3 | 120.2 (2) |
| N2—C2—H2 | 120.1 | C2—N2—C3 | 118.3 (2) |
| C1—C2—H2 | 120.1 | C5—N3—C7 | 125.5 (2) |
| N2—C3—C4 | 119.7 (2) | C5—N3—Ni1 | 118.92 (16) |
| N2—C3—H3A | 120.2 | C7—N3—Ni1 | 114.52 (15) |
| C4—C3—H3A | 120.2 | O3—N4—O4 | 121.7 (3) |
| N1—C4—C3 | 122.7 (2) | O3—N4—O2 | 117.7 (3) |
| N1—C4—C5 | 115.32 (19) | O4—N4—O2 | 120.6 (2) |
| C3—C4—C5 | 122.0 (2) | N4—O2—Ni1 | 121.09 (16) |
| N3—C5—C6 | 126.1 (2) | ||
| N1—C1—C2—N2 | 0.4 (4) | C4—C3—N2—O1 | −178.2 (2) |
| N2—C3—C4—N1 | −1.4 (4) | C4—C3—N2—C2 | 0.8 (4) |
| N2—C3—C4—C5 | 177.5 (2) | C6—C5—N3—C7 | −3.4 (4) |
| N1—C4—C5—N3 | −7.4 (3) | C4—C5—N3—C7 | 174.4 (2) |
| C3—C4—C5—N3 | 173.6 (2) | C6—C5—N3—Ni1 | −170.6 (2) |
| N1—C4—C5—C6 | 170.5 (2) | C4—C5—N3—Ni1 | 7.1 (3) |
| C3—C4—C5—C6 | −8.5 (3) | C7i—C7—N3—C5 | 164.2 (3) |
| C2—C1—N1—C4 | −1.0 (4) | C7i—C7—N3—Ni1 | −28.1 (3) |
| C2—C1—N1—Ni1 | 176.96 (19) | N3i—Ni1—N3—C5 | 179.1 (2) |
| C3—C4—N1—C1 | 1.4 (3) | N1i—Ni1—N3—C5 | 170.39 (19) |
| C5—C4—N1—C1 | −177.5 (2) | N1—Ni1—N3—C5 | −3.94 (17) |
| C3—C4—N1—Ni1 | −176.86 (18) | O2i—Ni1—N3—C5 | −93.61 (18) |
| C5—C4—N1—Ni1 | 4.2 (2) | O2—Ni1—N3—C5 | 88.02 (18) |
| N3—Ni1—N1—C1 | −178.5 (2) | N3i—Ni1—N3—C7 | 10.46 (13) |
| N3i—Ni1—N1—C1 | −169.8 (2) | N1i—Ni1—N3—C7 | 1.8 (3) |
| N1i—Ni1—N1—C1 | 3.71 (19) | N1—Ni1—N3—C7 | −172.56 (17) |
| O2i—Ni1—N1—C1 | −87.8 (2) | O2i—Ni1—N3—C7 | 97.77 (17) |
| O2—Ni1—N1—C1 | 94.4 (2) | O2—Ni1—N3—C7 | −80.60 (17) |
| N3—Ni1—N1—C4 | −0.56 (15) | O3—N4—O2—Ni1 | 178.3 (2) |
| N3i—Ni1—N1—C4 | 8.2 (3) | O4—N4—O2—Ni1 | −4.6 (3) |
| N1i—Ni1—N1—C4 | −178.30 (17) | N3—Ni1—O2—N4 | −134.41 (18) |
| O2i—Ni1—N1—C4 | 90.16 (15) | N3i—Ni1—O2—N4 | 144.10 (18) |
| O2—Ni1—N1—C4 | −87.66 (15) | N1i—Ni1—O2—N4 | 65.39 (18) |
| C1—C2—N2—O1 | 178.7 (3) | N1—Ni1—O2—N4 | −55.78 (18) |
| C1—C2—N2—C3 | −0.3 (4) |
| H··· | ||||
| O5—H1 | 0.78 (12) | 2.46 (14) | 3.086 (4) | 139 (14) |
| C3—H3 | 0.93 | 2.58 | 3.389 (3) | 146 |
| C6—H6 | 0.96 | 2.56 | 3.453 (4) | 156 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O5—H1 | 0.78 (12) | 2.46 (14) | 3.086 (4) | 139 (14) |
| C3—H3 | 0.93 | 2.58 | 3.389 (3) | 146 |
| C6—H6 | 0.96 | 2.56 | 3.453 (4) | 156 |
Symmetry codes: (i) ; (ii) ; (iii) .