| Literature DB >> 23723757 |
Saira Nayab1, Hong-In Lee, Jong Hwa Jeong.
Abstract
In the title compound, [PdCl2(C17H28N2)], the Pd(II) atom displays a square-planar coordination involving two N atoms of a 2,6-diisopropyl-N-[(S)-pyrrolidin-2-ylmeth-yl]aniline ligand and two chloride ligands, with a deviation of 0.090 (1) Å for the Pd(II) atom from the best plane. The absolute configuration of the chiral C atom of the pyrrolidine ring is S, which induces R configurations at the two N atoms of the aniline ligand. Optical isomerism arising from the chelate five-membered ring is configured as δ. The Pd-N bond lengths are 2.040 (3) and 2.072 (2) Å, and the Pd-Cl bond lengths are 2.3055 (8) and 2.3160 (8) Å. In the crystal, pairs of N-H⋯Cl hydrogen bonds link mol-ecules into discrete dimers.Entities:
Year: 2013 PMID: 23723757 PMCID: PMC3647791 DOI: 10.1107/S1600536813008271
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [PdCl2(C17H28N2)] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 25 reflections |
| θ = 9.0–13.0° | |
| µ = 1.24 mm−1 | |
| β = 94.851 (9)° | Brick, orange |
| 0.45 × 0.40 × 0.40 mm | |
| Enraf–Nonius CAD-4 four-circle diffractometer | 3089 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 25.5°, θmin = 1.7° |
| ω/2θ scans | |
| Absorption correction: ψ scan (ABSCALC; McArdle & Daly, 1999) | |
| 3790 measured reflections | 3 standard reflections every 60 min |
| 3580 independent reflections | intensity decay: 0.2% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3580 reflections | (Δ/σ)max = 0.004 |
| 199 parameters | Δρmax = 1.33 e Å−3 |
| 0 restraints | Δρmin = −1.56 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Pd | 0.792743 (8) | 0.79819 (2) | 0.934349 (11) | 0.02593 (12) | |
| Cl1 | 0.71265 (3) | 0.92407 (9) | 0.89218 (4) | 0.0389 (2) | |
| Cl2 | 0.83021 (3) | 1.01710 (9) | 0.99173 (5) | 0.0391 (2) | |
| N1 | 0.76098 (10) | 0.5922 (3) | 0.89652 (14) | 0.0320 (5) | |
| H1 | 0.7308 | 0.5786 | 0.9169 | 0.038* | |
| N2 | 0.86249 (10) | 0.6681 (3) | 0.96516 (14) | 0.0296 (5) | |
| H2 | 0.8597 | 0.6456 | 1.0103 | 0.035* | |
| C1 | 0.74724 (15) | 0.5713 (4) | 0.81664 (19) | 0.0448 (8) | |
| H1A | 0.7770 | 0.6075 | 0.7889 | 0.054* | |
| H1B | 0.7135 | 0.6253 | 0.8001 | 0.054* | |
| C2 | 0.74001 (19) | 0.3971 (4) | 0.8098 (2) | 0.0560 (10) | |
| H2A | 0.7043 | 0.3650 | 0.8245 | 0.067* | |
| H2B | 0.7436 | 0.3629 | 0.7601 | 0.067* | |
| C3 | 0.78631 (16) | 0.3348 (4) | 0.8613 (2) | 0.0518 (10) | |
| H3A | 0.8189 | 0.3156 | 0.8356 | 0.062* | |
| H3B | 0.7754 | 0.2388 | 0.8833 | 0.062* | |
| C4 | 0.79815 (12) | 0.4599 (4) | 0.92021 (18) | 0.0352 (7) | |
| H4 | 0.7888 | 0.4211 | 0.9678 | 0.042* | |
| C5 | 0.85712 (12) | 0.5168 (3) | 0.92571 (19) | 0.0362 (7) | |
| H5A | 0.8808 | 0.4409 | 0.9515 | 0.043* | |
| H5B | 0.8692 | 0.5287 | 0.8770 | 0.043* | |
| C6 | 0.91821 (11) | 0.7313 (3) | 0.96309 (17) | 0.0291 (6) | |
| C7 | 0.95576 (13) | 0.7160 (3) | 1.02479 (18) | 0.0327 (7) | |
| C8 | 0.93964 (13) | 0.6498 (4) | 1.09665 (17) | 0.0372 (7) | |
| H8 | 0.9095 | 0.5762 | 1.0852 | 0.045* | |
| C9 | 0.9180 (2) | 0.7757 (5) | 1.1435 (3) | 0.0637 (12) | |
| H9A | 0.9469 | 0.8491 | 1.1562 | 0.096* | |
| H9B | 0.9058 | 0.7311 | 1.1873 | 0.096* | |
| H9C | 0.8876 | 0.8270 | 1.1169 | 0.096* | |
| C10 | 0.98669 (18) | 0.5623 (6) | 1.1401 (2) | 0.0643 (11) | |
| H10A | 1.0162 | 0.6329 | 1.1544 | 0.096* | |
| H10B | 1.0002 | 0.4822 | 1.1101 | 0.096* | |
| H10C | 0.9732 | 0.5173 | 1.1829 | 0.096* | |
| C11 | 1.00930 (14) | 0.7704 (4) | 1.0203 (2) | 0.0406 (8) | |
| H11 | 1.0347 | 0.7629 | 1.0610 | 0.049* | |
| C12 | 1.02549 (14) | 0.8350 (5) | 0.9571 (2) | 0.0463 (8) | |
| H12 | 1.0616 | 0.8691 | 0.9548 | 0.056* | |
| C13 | 0.98797 (13) | 0.8487 (4) | 0.8975 (2) | 0.0410 (7) | |
| H13 | 0.9993 | 0.8927 | 0.8550 | 0.049* | |
| C14 | 0.93362 (13) | 0.7992 (3) | 0.89800 (18) | 0.0319 (7) | |
| C15 | 0.89514 (13) | 0.8238 (4) | 0.82901 (18) | 0.0383 (7) | |
| H15 | 0.8582 | 0.7891 | 0.8393 | 0.046* | |
| C16 | 0.89141 (18) | 0.9966 (5) | 0.8104 (3) | 0.0623 (11) | |
| H16A | 0.9274 | 1.0348 | 0.8020 | 0.093* | |
| H16B | 0.8776 | 1.0520 | 0.8504 | 0.093* | |
| H16C | 0.8668 | 1.0113 | 0.7672 | 0.093* | |
| C17 | 0.91266 (18) | 0.7291 (6) | 0.7649 (2) | 0.0580 (11) | |
| H17A | 0.9496 | 0.7572 | 0.7552 | 0.087* | |
| H17B | 0.8879 | 0.7492 | 0.7224 | 0.087* | |
| H17C | 0.9116 | 0.6211 | 0.7768 | 0.087* |
| Pd | 0.02146 (17) | 0.02124 (17) | 0.03568 (17) | 0.00033 (7) | 0.00598 (10) | −0.00046 (8) |
| Cl1 | 0.0303 (4) | 0.0360 (4) | 0.0503 (5) | 0.0077 (3) | 0.0037 (3) | 0.0045 (3) |
| Cl2 | 0.0330 (4) | 0.0265 (4) | 0.0583 (5) | −0.0053 (3) | 0.0064 (3) | −0.0055 (3) |
| N1 | 0.0259 (12) | 0.0289 (13) | 0.0417 (14) | −0.0020 (10) | 0.0056 (10) | −0.0027 (11) |
| N2 | 0.0253 (12) | 0.0252 (11) | 0.0385 (14) | 0.0003 (10) | 0.0048 (10) | 0.0039 (11) |
| C1 | 0.054 (2) | 0.0314 (17) | 0.0469 (19) | 0.0011 (14) | −0.0072 (15) | −0.0049 (14) |
| C2 | 0.077 (3) | 0.0322 (18) | 0.057 (2) | −0.0009 (18) | −0.0068 (19) | −0.0135 (17) |
| C3 | 0.053 (2) | 0.0223 (15) | 0.079 (3) | −0.0006 (15) | −0.0031 (19) | −0.0053 (17) |
| C4 | 0.0348 (15) | 0.0246 (15) | 0.0461 (17) | −0.0013 (12) | 0.0030 (13) | 0.0054 (13) |
| C5 | 0.0317 (15) | 0.0245 (15) | 0.0526 (19) | 0.0015 (12) | 0.0054 (13) | −0.0026 (13) |
| C6 | 0.0207 (13) | 0.0271 (14) | 0.0399 (16) | 0.0026 (11) | 0.0048 (11) | −0.0020 (12) |
| C7 | 0.0309 (15) | 0.0262 (15) | 0.0409 (17) | 0.0031 (11) | 0.0027 (13) | −0.0018 (12) |
| C8 | 0.0385 (17) | 0.0371 (17) | 0.0354 (16) | −0.0002 (14) | −0.0005 (13) | 0.0023 (14) |
| C9 | 0.075 (3) | 0.057 (3) | 0.063 (3) | 0.006 (2) | 0.029 (2) | −0.005 (2) |
| C10 | 0.063 (3) | 0.065 (3) | 0.064 (3) | 0.013 (2) | −0.003 (2) | 0.016 (2) |
| C11 | 0.0279 (15) | 0.0421 (19) | 0.050 (2) | −0.0007 (13) | −0.0054 (14) | −0.0020 (16) |
| C12 | 0.0281 (16) | 0.0480 (19) | 0.064 (2) | −0.0051 (15) | 0.0089 (15) | 0.0036 (18) |
| C13 | 0.0302 (15) | 0.0403 (18) | 0.054 (2) | −0.0019 (14) | 0.0116 (14) | 0.0073 (15) |
| C14 | 0.0289 (15) | 0.0274 (16) | 0.0404 (17) | 0.0013 (10) | 0.0079 (13) | −0.0007 (12) |
| C15 | 0.0319 (16) | 0.0445 (19) | 0.0402 (18) | 0.0028 (13) | 0.0133 (14) | 0.0112 (15) |
| C16 | 0.056 (2) | 0.059 (3) | 0.071 (3) | 0.0042 (19) | 0.003 (2) | 0.028 (2) |
| C17 | 0.048 (2) | 0.083 (3) | 0.043 (2) | 0.006 (2) | 0.0075 (17) | −0.004 (2) |
| Pd—N1 | 2.040 (3) | C7—C8 | 1.519 (5) |
| Pd—N2 | 2.072 (2) | C8—C9 | 1.510 (5) |
| Pd—Cl1 | 2.3055 (8) | C8—C10 | 1.536 (5) |
| Pd—Cl2 | 2.3160 (8) | C8—H8 | 0.9800 |
| N1—C1 | 1.487 (4) | C9—H9A | 0.9600 |
| N1—C4 | 1.500 (4) | C9—H9B | 0.9600 |
| N1—H1 | 0.8600 | C9—H9C | 0.9600 |
| N2—C6 | 1.463 (4) | C10—H10A | 0.9600 |
| N2—C5 | 1.497 (4) | C10—H10B | 0.9600 |
| N2—H2 | 0.8600 | C10—H10C | 0.9600 |
| C1—C2 | 1.521 (5) | C11—C12 | 1.375 (5) |
| C1—H1A | 0.9700 | C11—H11 | 0.9300 |
| C1—H1B | 0.9700 | C12—C13 | 1.369 (5) |
| C2—C3 | 1.507 (5) | C12—H12 | 0.9300 |
| C2—H2A | 0.9700 | C13—C14 | 1.388 (4) |
| C2—H2B | 0.9700 | C13—H13 | 0.9300 |
| C3—C4 | 1.539 (5) | C14—C15 | 1.524 (5) |
| C3—H3A | 0.9700 | C15—C17 | 1.524 (5) |
| C3—H3B | 0.9700 | C15—C16 | 1.535 (5) |
| C4—C5 | 1.510 (4) | C15—H15 | 0.9800 |
| C4—H4 | 0.9800 | C16—H16A | 0.9600 |
| C5—H5A | 0.9700 | C16—H16B | 0.9600 |
| C5—H5B | 0.9700 | C16—H16C | 0.9600 |
| C6—C7 | 1.399 (4) | C17—H17A | 0.9600 |
| C6—C14 | 1.410 (4) | C17—H17B | 0.9600 |
| C7—C11 | 1.392 (5) | C17—H17C | 0.9600 |
| N1—Pd—N2 | 83.98 (10) | C11—C7—C6 | 117.9 (3) |
| N1—Pd—Cl1 | 90.83 (7) | C11—C7—C8 | 119.3 (3) |
| N2—Pd—Cl1 | 174.45 (7) | C6—C7—C8 | 122.7 (3) |
| N1—Pd—Cl2 | 172.72 (7) | C9—C8—C7 | 110.5 (3) |
| N2—Pd—Cl2 | 92.27 (8) | C9—C8—C10 | 109.8 (3) |
| Cl1—Pd—Cl2 | 93.10 (3) | C7—C8—C10 | 113.6 (3) |
| C1—N1—C4 | 105.8 (2) | C9—C8—H8 | 107.5 |
| C1—N1—Pd | 119.3 (2) | C7—C8—H8 | 107.5 |
| C4—N1—Pd | 111.56 (18) | C10—C8—H8 | 107.5 |
| C1—N1—H1 | 106.5 | C8—C9—H9A | 109.5 |
| C4—N1—H1 | 106.5 | C8—C9—H9B | 109.5 |
| Pd—N1—H1 | 106.5 | H9A—C9—H9B | 109.5 |
| C6—N2—C5 | 111.0 (2) | C8—C9—H9C | 109.5 |
| C6—N2—Pd | 121.74 (19) | H9A—C9—H9C | 109.5 |
| C5—N2—Pd | 107.90 (18) | H9B—C9—H9C | 109.5 |
| C6—N2—H2 | 104.9 | C8—C10—H10A | 109.5 |
| C5—N2—H2 | 104.9 | C8—C10—H10B | 109.5 |
| Pd—N2—H2 | 104.9 | H10A—C10—H10B | 109.5 |
| N1—C1—C2 | 102.5 (3) | C8—C10—H10C | 109.5 |
| N1—C1—H1A | 111.3 | H10A—C10—H10C | 109.5 |
| C2—C1—H1A | 111.3 | H10B—C10—H10C | 109.5 |
| N1—C1—H1B | 111.3 | C12—C11—C7 | 121.5 (3) |
| C2—C1—H1B | 111.3 | C12—C11—H11 | 119.3 |
| H1A—C1—H1B | 109.2 | C7—C11—H11 | 119.3 |
| C3—C2—C1 | 103.2 (3) | C13—C12—C11 | 119.4 (3) |
| C3—C2—H2A | 111.1 | C13—C12—H12 | 120.3 |
| C1—C2—H2A | 111.1 | C11—C12—H12 | 120.3 |
| C3—C2—H2B | 111.1 | C12—C13—C14 | 122.5 (3) |
| C1—C2—H2B | 111.1 | C12—C13—H13 | 118.8 |
| H2A—C2—H2B | 109.1 | C14—C13—H13 | 118.8 |
| C2—C3—C4 | 105.9 (3) | C13—C14—C6 | 117.1 (3) |
| C2—C3—H3A | 110.6 | C13—C14—C15 | 117.9 (3) |
| C4—C3—H3A | 110.6 | C6—C14—C15 | 125.0 (3) |
| C2—C3—H3B | 110.6 | C17—C15—C14 | 112.0 (3) |
| C4—C3—H3B | 110.6 | C17—C15—C16 | 111.6 (3) |
| H3A—C3—H3B | 108.7 | C14—C15—C16 | 110.0 (3) |
| N1—C4—C5 | 108.3 (2) | C17—C15—H15 | 107.7 |
| N1—C4—C3 | 105.2 (3) | C14—C15—H15 | 107.7 |
| C5—C4—C3 | 113.3 (3) | C16—C15—H15 | 107.7 |
| N1—C4—H4 | 110.0 | C15—C16—H16A | 109.5 |
| C5—C4—H4 | 110.0 | C15—C16—H16B | 109.5 |
| C3—C4—H4 | 110.0 | H16A—C16—H16B | 109.5 |
| N2—C5—C4 | 111.2 (2) | C15—C16—H16C | 109.5 |
| N2—C5—H5A | 109.4 | H16A—C16—H16C | 109.5 |
| C4—C5—H5A | 109.4 | H16B—C16—H16C | 109.5 |
| N2—C5—H5B | 109.4 | C15—C17—H17A | 109.5 |
| C4—C5—H5B | 109.4 | C15—C17—H17B | 109.5 |
| H5A—C5—H5B | 108.0 | H17A—C17—H17B | 109.5 |
| C7—C6—C14 | 121.6 (3) | C15—C17—H17C | 109.5 |
| C7—C6—N2 | 119.0 (3) | H17A—C17—H17C | 109.5 |
| C14—C6—N2 | 119.4 (3) | H17B—C17—H17C | 109.5 |
| H··· | ||||
| N1—H1···Cl2i | 0.86 | 2.47 | 3.283 (3) | 158 |
| N2—H2···Cl1i | 0.86 | 2.68 | 3.410 (3) | 144 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯Cl2i | 0.86 | 2.47 | 3.283 (3) | 158 |
| N2—H2⋯Cl1i | 0.86 | 2.68 | 3.410 (3) | 144 |
Symmetry code: (i) .