Literature DB >> 23722858

Expression, purification, crystallization and preliminary X-ray crystallographic study of the nucleocapsid protein of tomato spotted wilt virus.

Keisuke Komoda1, Masanori Narita, Isao Tanaka, Min Yao.   

Abstract

Tomato spotted wilt virus (TSWV), which causes severe damage to various agricultural crops such as tomato, pepper, lettuce and peanut, is a negative-stranded RNA virus belonging to the Tospovirus genus of the Bunyaviridae family. Viral genomic RNA molecules are packaged in the form of ribonucleoprotein complexes, each of which contains one viral RNA molecule that is coated with many nucleocapsid (N) proteins. Here, the expression and crystallization of TSWV N protein are reported. Native and selenomethionine-substituted crystals of N protein belonged to the same space group P2(1). Their unit-cell parameters were a = 66.8, b = 97.2, c = 72.0 Å, β = 112.8° and a = 66.5, b = 96.3, c = 72.1 Å, β = 113.4°, respectively.

Entities:  

Keywords:  Tomato spotted wilt virus; Tospovirus

Mesh:

Substances:

Year:  2013        PMID: 23722858      PMCID: PMC3668599          DOI: 10.1107/S174430911301302X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

1.  Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7.

Authors:  Gerrit Langer; Serge X Cohen; Victor S Lamzin; Anastassis Perrakis
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

2.  Structure, function, and evolution of the Crimean-Congo hemorrhagic fever virus nucleocapsid protein.

Authors:  Stephen D Carter; Rebecca Surtees; Cheryl T Walter; Antonio Ariza; Éric Bergeron; Stuart T Nichol; Julian A Hiscox; Thomas A Edwards; John N Barr
Journal:  J Virol       Date:  2012-08-08       Impact factor: 5.103

Review 3.  Molecular biology of the Bunyaviridae.

Authors:  R M Elliott
Journal:  J Gen Virol       Date:  1990-03       Impact factor: 3.891

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Structure of the Rift Valley fever virus nucleocapsid protein reveals another architecture for RNA encapsidation.

Authors:  Donald D Raymond; Mary E Piper; Sonja R Gerrard; Janet L Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-14       Impact factor: 11.205

6.  Phleboviruses encapsidate their genomes by sequestering RNA bases.

Authors:  Donald D Raymond; Mary E Piper; Sonja R Gerrard; Georgios Skiniotis; Janet L Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-05       Impact factor: 11.205

7.  Tomato spotted wilt virus nucleocapsid protein interacts with both viral glycoproteins Gn and Gc in planta.

Authors:  Daniela Ribeiro; Jan Willem Borst; Rob Goldbach; Richard Kormelink
Journal:  Virology       Date:  2008-10-29       Impact factor: 3.616

8.  Structure of Crimean-Congo hemorrhagic fever virus nucleoprotein: superhelical homo-oligomers and the role of caspase-3 cleavage.

Authors:  Yi Wang; Sujit Dutta; Helen Karlberg; Stéphanie Devignot; Friedemann Weber; Quan Hao; Yee Joo Tan; Ali Mirazimi; Masayo Kotaka
Journal:  J Virol       Date:  2012-09-05       Impact factor: 5.103

9.  The hexamer structure of Rift Valley fever virus nucleoprotein suggests a mechanism for its assembly into ribonucleoprotein complexes.

Authors:  François Ferron; Zongli Li; Eric I Danek; Dahai Luo; Yeehwa Wong; Bruno Coutard; Violaine Lantez; Rémi Charrel; Bruno Canard; Thomas Walz; Julien Lescar
Journal:  PLoS Pathog       Date:  2011-05-12       Impact factor: 6.823

10.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
View more
  3 in total

1.  Asymmetric Trimeric Ring Structure of the Nucleocapsid Protein of Tospovirus.

Authors:  Keisuke Komoda; Masanori Narita; Keitaro Yamashita; Isao Tanaka; Min Yao
Journal:  J Virol       Date:  2017-09-27       Impact factor: 5.103

2.  Structure and function analysis of nucleocapsid protein of tomato spotted wilt virus interacting with RNA using homology modeling.

Authors:  Jia Li; Zhike Feng; Jianyan Wu; Ying Huang; Gang Lu; Min Zhu; Bi Wang; Xiang Mao; Xiaorong Tao
Journal:  J Biol Chem       Date:  2014-12-24       Impact factor: 5.157

3.  Identification and localization of Tospovirus genus-wide conserved residues in 3D models of the nucleocapsid and the silencing suppressor proteins.

Authors:  Cristian Olaya; Badri Adhikari; Gaurav Raikhy; Jianlin Cheng; Hanu R Pappu
Journal:  Virol J       Date:  2019-01-11       Impact factor: 4.099

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.