Literature DB >> 2371282

Site-directed mutagenesis reveals a liver transcription factor essential for the albumin transcriptional enhancer.

K S Zaret1, J K Liu, C M DiPersio.   

Abstract

A method based on the polymerase chain reaction is described for constructing a clustered set of basepair changes, deletions, or insertions at any site on a DNA fragment. Advantages of the procedure are that virtually every product has the desired sequence alteration and that only a single round of polymerase chain reaction is required. We used this method to demonstrate that the binding of a specific liver nuclear protein, which we call eH-TF, is essential for the function of the enhancer of the mouse albumin gene. The eH-TF binding activity is hepatocyte-specific; it binds to a functional region of the albumin promoter and is distinct from other albumin promoter factors, and part of the eH-TF binding sequence, TGTTTGC, occurs in functional regulatory sites of other liver-specific genes.

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Year:  1990        PMID: 2371282      PMCID: PMC54346          DOI: 10.1073/pnas.87.14.5469

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

Review 1.  How do different transcription factors binding the same DNA sequence sort out their jobs?

Authors:  W Schaffner
Journal:  Trends Genet       Date:  1989-02       Impact factor: 11.639

2.  Fidelity of DNA synthesis by the Thermus aquaticus DNA polymerase.

Authors:  K R Tindall; T A Kunkel
Journal:  Biochemistry       Date:  1988-08-09       Impact factor: 3.162

3.  Cellular factors that interact with the hepatitis B virus enhancer.

Authors:  R Ben-Levy; O Faktor; I Berger; Y Shaul
Journal:  Mol Cell Biol       Date:  1989-04       Impact factor: 4.272

4.  Use of polymerase chain reaction catalyzed by Taq DNA polymerase for site-specific mutagenesis.

Authors:  H Kadowaki; T Kadowaki; F E Wondisford; S I Taylor
Journal:  Gene       Date:  1989-03-15       Impact factor: 3.688

5.  Site-directed mutagenesis by overlap extension using the polymerase chain reaction.

Authors:  S N Ho; H D Hunt; R M Horton; J K Pullen; L R Pease
Journal:  Gene       Date:  1989-04-15       Impact factor: 3.688

6.  Positive and negative regulatory elements in the mouse albumin enhancer.

Authors:  R S Herbst; N Friedman; J E Darnell; L E Babiss
Journal:  Proc Natl Acad Sci U S A       Date:  1989-03       Impact factor: 11.205

7.  Isolation of a recombinant copy of the gene encoding C/EBP.

Authors:  W H Landschulz; P F Johnson; E Y Adashi; B J Graves; S L McKnight
Journal:  Genes Dev       Date:  1988-07       Impact factor: 11.361

8.  A novel ochre mutation in the beta-thalassemia gene of a Thai. Identification by direct cloning of the entire beta-globin gene amplified using polymerase chain reactions.

Authors:  S Fucharoen; G Fucharoen; P Fucharoen; Y Fukumaki
Journal:  J Biol Chem       Date:  1989-05-15       Impact factor: 5.157

9.  DNA sequencing with Thermus aquaticus DNA polymerase and direct sequencing of polymerase chain reaction-amplified DNA.

Authors:  M A Innis; K B Myambo; D H Gelfand; M A Brow
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

10.  Two different liver-specific factors stimulate in vitro transcription from the human alpha 1-antitrypsin promoter.

Authors:  P Monaci; A Nicosia; R Cortese
Journal:  EMBO J       Date:  1988-07       Impact factor: 11.598

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  38 in total

1.  Functionally significant secondary structure of the simian virus 40 late polyadenylation signal.

Authors:  H Hans; J C Alwine
Journal:  Mol Cell Biol       Date:  2000-04       Impact factor: 4.272

2.  Definition of the upstream efficiency element of the simian virus 40 late polyadenylation signal by using in vitro analyses.

Authors:  N Schek; C Cooke; J C Alwine
Journal:  Mol Cell Biol       Date:  1992-12       Impact factor: 4.272

3.  The mouse alpha-fetoprotein promoter is repressed in HepG2 hepatoma cells by hepatocyte nuclear factor-3 (FOXA).

Authors:  Mei-Chuan Huang; Kelly Ke Li; Brett T Spear
Journal:  DNA Cell Biol       Date:  2002-08       Impact factor: 3.311

4.  Linker-scanning mutational analysis of the transcriptional activity of the human immunodeficiency virus type 1 long terminal repeat.

Authors:  S L Zeichner; J Y Kim; J C Alwine
Journal:  J Virol       Date:  1991-05       Impact factor: 5.103

5.  Mutational analysis of the Bacillus subtilis purA operator site.

Authors:  Pekka Rappu; Mari Leppihalme; Pekka Mäntsälä
Journal:  Curr Microbiol       Date:  2005-09-16       Impact factor: 2.188

6.  The human immunodeficiency virus type 1 polyadenylylation signal: a 3' long terminal repeat element upstream of the AAUAAA necessary for efficient polyadenylylation.

Authors:  A Valsamakis; S Zeichner; S Carswell; J C Alwine
Journal:  Proc Natl Acad Sci U S A       Date:  1991-03-15       Impact factor: 11.205

7.  The extracellular matrix coordinately modulates liver transcription factors and hepatocyte morphology.

Authors:  C M DiPersio; D A Jackson; K S Zaret
Journal:  Mol Cell Biol       Date:  1991-09       Impact factor: 4.272

8.  Extracellular signals that regulate liver transcription factors during hepatic differentiation in vitro.

Authors:  J K Liu; C M DiPersio; K S Zaret
Journal:  Mol Cell Biol       Date:  1991-02       Impact factor: 4.272

9.  The distal enhancer implicated in the developmental regulation of the tyrosine aminotransferase gene is bound by liver-specific and ubiquitous factors.

Authors:  D Nitsch; G Schütz
Journal:  Mol Cell Biol       Date:  1993-08       Impact factor: 4.272

10.  Chicken vitellogenin gene-binding protein, a leucine zipper transcription factor that binds to an important control element in the chicken vitellogenin II promoter, is related to rat DBP.

Authors:  S V Iyer; D L Davis; S N Seal; J B Burch
Journal:  Mol Cell Biol       Date:  1991-10       Impact factor: 4.272

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