Literature DB >> 23710111

Procedures for numerical analysis of circadian rhythms.

Roberto Refinetti1, Germaine Corné Lissen, Franz Halberg.   

Abstract

This article reviews various procedures used in the analysis of circadian rhythms at the populational, organismal, cellular and molecular levels. The procedures range from visual inspection of time plots and actograms to several mathematical methods of time series analysis. Computational steps are described in some detail, and additional bibliographic resources and computer programs are listed.

Keywords:  Biostatistics; chronobiology; chronomics; circadian rhythm; time series analysis

Year:  2007        PMID： 23710111      PMCID： PMC3663600          DOI： 10.1080/09291010600903692

Source DB:  PubMed          Journal:  Biol Rhythm Res        ISSN： 0929-1016            Impact factor:   1.219


  121 in total

Review 1.  Chronomes, time structures, for chronobioengineering for "a full life".

Authors:  G Cornélissen; F Halberg; O Schwartzkopff; P Delmore; G Katinas; D Hunter; B Tarquini; R Tarquini; F Perfetto; Y Watanabe; K Otsuka
Journal:  Biomed Instrum Technol       Date:  1999 Mar-Apr

2.  Chronomics complement, among many other fields, genomics and proteomics.

Authors:  F Halberg; G Cornélissen; G Katinas; D Hillman; O Schwartzkopff
Journal:  Neuro Endocrinol Lett       Date:  2001       Impact factor: 0.765

3.  Transdisciplinary unifying implications of circadian findings in the 1950s.

Authors:  Franz Halberg; Germaine Cornélissen; George Katinas; Elena V Syutkina; Robert B Sothern; Rina Zaslavskaya; Francine Halberg; Yoshihiko Watanabe; Othild Schwartzkopff; Kuniaki Otsuka; Roberto Tarquini; Perfetto Frederico; Jarmila Siggelova
Journal:  J Circadian Rhythms       Date:  2003-10-29

4.  Non-stationary time series and the robustness of circadian rhythms.

Authors:  Roberto Refinetti
Journal:  J Theor Biol       Date:  2004-04-21       Impact factor: 2.691

5.  An extremely simple procedure for the analysis of circadian and estrous periodicity.

Authors:  R Refinetti
Journal:  Physiol Behav       Date:  1991-09

Review 6.  The week in phylogeny and ontogeny: opportunities for oncology.

Authors:  F Halberg
Journal:  In Vivo       Date:  1995 Jul-Aug       Impact factor: 2.155

7.  Chronobiologic serial sections of several orders.

Authors:  B Arbogast; W Lubanovic; F Halberg; G Cornélissen; C Bingham
Journal:  Chronobiologia       Date:  1983 Jan-Mar

8.  Spectral resolution of low-frequency, small-amplitude rhythms in excreted 17-ketosteroids; probable androgen-induced circaseptan desynchronization.

Authors:  F Halberg; M Engeli; C Hamburger; D Hillman
Journal:  Acta Endocrinol (Copenh)       Date:  1965

9.  Activity rhythms of wild and laboratory golden hamsters (Mesocricetus auratus) under entrained and free-running conditions.

Authors:  D Weinert; P Fritzsche; R Gattermann
Journal:  Chronobiol Int       Date:  2001-11       Impact factor: 2.877

10.  Alteration of circadian period length does not influence the ovarian cycle length in common marmosets, Callithrix j. jacchus (primates).

Authors:  L Härter; H G Erkert
Journal:  Chronobiol Int       Date:  1993-06       Impact factor: 2.877
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  201 in total

1.  Circadian variations in gene expression in rat abdominal adipose tissue and relationship to physiology.

Authors:  Siddharth Sukumaran; Bai Xue; William J Jusko; Debra C Dubois; Richard R Almon
Journal:  Physiol Genomics       Date:  2010-08-03       Impact factor: 3.107

Review 2.  A review of signals used in sleep analysis.

Authors:  A Roebuck; V Monasterio; E Gederi; M Osipov; J Behar; A Malhotra; T Penzel; G D Clifford
Journal:  Physiol Meas       Date:  2013-12-17       Impact factor: 2.833

3.  Applying time series analyses on continuous accelerometry data-A clinical example in older adults with and without cognitive impairment.

Authors:  Torsten Rackoll; Konrad Neumann; Sven Passmann; Ulrike Grittner; Nadine Külzow; Julia Ladenbauer; Agnes Flöel
Journal:  PLoS One       Date:  2021-05-13       Impact factor: 3.240

4.  Desoxycorticosterone pivalate-salt treatment leads to non-dipping hypertension in Per1 knockout mice.

Authors:  K Solocinski; M Holzworth; X Wen; K-Y Cheng; I J Lynch; B D Cain; C S Wingo; M L Gumz
Journal:  Acta Physiol (Oxf)       Date:  2016-10-03       Impact factor: 6.311

5.  CIRCADA: Shiny Apps for Exploration of Experimental and Synthetic Circadian Time Series with an Educational Emphasis.

Authors:  Lisa Cenek; Liubou Klindziuk; Cindy Lopez; Eleanor McCartney; Blanca Martin Burgos; Selma Tir; Mary E Harrington; Tanya L Leise
Journal:  J Biol Rhythms       Date:  2020-01-28       Impact factor: 3.182

6.  Daily rhythmicity and hibernation in the Anatolian ground squirrel under natural and laboratory conditions.

Authors:  Mutlu Kart Gür; Roberto Refinetti; Hakan Gür
Journal:  J Comp Physiol B       Date:  2008-09-17       Impact factor: 2.200

7.  The daily rhythm of body temperature, heart and respiratory rate in newborn dogs.

Authors:  Giuseppe Piccione; Elisabetta Giudice; Francesco Fazio; Jacopo P Mortola
Journal:  J Comp Physiol B       Date:  2010-03-12       Impact factor: 2.200

8.  COSMIC INHERITANCE RULES: IMPLICATIONS FOR HEALTH CARE AND SCIENCE.

Authors:  F Halberg; G Cornélissen; G S Katinas; Y Watanabe; J Siegelová
Journal:  Scr Med (Brno)       Date:  2010

9.  CYCLOPS reveals human transcriptional rhythms in health and disease.

Authors:  Ron C Anafi; Lauren J Francey; John B Hogenesch; Junhyong Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-24       Impact factor: 11.205

10.  Daily rhythms in the morphometric parameters of hepatocytes and intestine of the European sea bass (Dicentrarchus labrax): influence of feeding time and hepatic zonation.

Authors:  Inmaculada Rodríguez; Mónica B Betancor; José Ángel López-Jiménez; María Ángeles Esteban; Francisco Javier Sánchez-Vázquez; Jose Fernando López-Olmeda
Journal:  J Comp Physiol B       Date:  2021-02-23       Impact factor: 2.200
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