Literature DB >> 23710046

Burkholderia rhynchosiae sp. nov., isolated from Rhynchosia ferulifolia root nodules.

Sofie E De Meyer1, Margo Cnockaert2, Julie K Ardley1, Robert D Trengove3, Giovanni Garau4, John G Howieson1, Peter Vandamme2.   

Abstract

Two strains of Gram-stain-negative, rod-shaped bacteria were isolated from root nodules of the South African legume Rhynchosia ferulifolia and authenticated on this host. Based on phylogenetic analysis of the 16S rRNA gene, strains WSM3930 and WSM3937(T) belonged to the genus Burkholderia, with the highest degree of sequence similarity to Burkholderia terricola (98.84 %). Additionally, the housekeeping genes gyrB and recA were analysed since 16S rRNA gene sequences are highly similar between closely related species of the genus Burkholderia. The results obtained for both housekeeping genes, gyrB and recA, showed the highest degree of sequence similarity of the novel strains towards Burkholderia caledonica LMG 19076(T) (94.2 % and 94.5 %, respectively). Chemotaxonomic data, including fatty acid profiles and respiratory quinone data supported the assignment of strains WSM3930 and WSM3937(T) to the genus Burkholderia. DNA-DNA hybridizations, and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strains WSM3930 and WSM3937(T) from the most closely related species of the genus Burkholderia with validly published names. We conclude, therefore, that these strains represent a novel species for which the name Burkholderia rhynchosiae sp. nov. is proposed, with strain WSM3937(T) ( = LMG 27174(T) = HAMBI 3354(T)) as the type strain.

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Year:  2013        PMID: 23710046     DOI: 10.1099/ijs.0.048751-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  8 in total

1.  Burkholderia sp. induces functional nodules on the South African invasive legume Dipogon lignosus (Phaseoleae) in New Zealand soils.

Authors:  Wendy Y Y Liu; Hayley J Ridgway; Trevor K James; Euan K James; Wen-Ming Chen; Janet I Sprent; J Peter W Young; Mitchell Andrews
Journal:  Microb Ecol       Date:  2014-05-07       Impact factor: 4.552

2.  Biogeographical Patterns of Legume-Nodulating Burkholderia spp.: from African Fynbos to Continental Scales.

Authors:  Benny Lemaire; Samson B M Chimphango; Charles Stirton; Suhail Rafudeen; Olivier Honnay; Erik Smets; Wen-Ming Chen; Janet Sprent; Euan K James; A Muthama Muasya
Journal:  Appl Environ Microbiol       Date:  2016-08-15       Impact factor: 4.792

3.  High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Burkholderia sp. strain UYPR1.413.

Authors:  Sofie E De Meyer; Elena Fabiano; Rui Tian; Peter Van Berkum; Rekha Seshadri; Tbk Reddy; Victor Markowitz; Natalia Ivanova; Amrita Pati; Tanja Woyke; John Howieson; Nikos Kyrpides; Wayne Reeve
Journal:  Stand Genomic Sci       Date:  2015-06-04

4.  Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species.

Authors:  Amandeep Sawana; Mobolaji Adeolu; Radhey S Gupta
Journal:  Front Genet       Date:  2014-12-19       Impact factor: 4.599

Review 5.  Members of the genus Burkholderia: good and bad guys.

Authors:  Leo Eberl; Peter Vandamme
Journal:  F1000Res       Date:  2016-05-26

Review 6.  Specificity in Legume-Rhizobia Symbioses.

Authors:  Mitchell Andrews; Morag E Andrews
Journal:  Int J Mol Sci       Date:  2017-03-26       Impact factor: 5.923

7.  High-quality permanent draft genome sequence of the Lebeckia - nodulating Burkholderia dilworthii strain WSM3556(T).

Authors:  Sofie E De Meyer; Rui Tian; Rekha Seshadri; Natalia Ivanova; Amrita Pati; Victor Markowitz; Tanja Woyke; Ron Yates; John Howieson; Nikos Kyrpides; Wayne Reeve
Journal:  Stand Genomic Sci       Date:  2015-09-19

8.  Transcriptome Analysis of Paraburkholderia phymatum under Nitrogen Starvation and during Symbiosis with Phaseolus Vulgaris.

Authors:  Martina Lardi; Yilei Liu; Gabriela Purtschert; Samanta Bolzan de Campos; Gabriella Pessi
Journal:  Genes (Basel)       Date:  2017-12-15       Impact factor: 4.096

  8 in total

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