Literature DB >> 23703958

Mathematical modeling of folate metabolism.

John C Panetta1, Steven W Paugh, William E Evans.   

Abstract

Folate metabolism is a complex biological process that is influenced by many variables including transporters, cofactors, and enzymes. Mathematical models provide a useful tool to evaluate this complex system and to elucidate hypotheses that would be otherwise untenable to test in vitro or in vivo. Forty years of model development and refinement along with enhancements in technology have led to systematic improvement in our biological understanding of these models. However, increased complexity does not always lead to increased understanding, and a balanced approach to modeling the system is often advantageous. This approach should address questions about sensitivity of the model to variation and incorporate genomic data. The folate model is a useful platform for investigating the effects of antifolates on the folate pathway. The utility of the model is demonstrated through interrogation of drug resistance, drug-drug interactions, drug selectivity, and drug doses and schedules. Mathematics can be used to create models with the ability to design and improve rationale therapeutic interventions.
Copyright © 2013 Wiley Periodicals, Inc.

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Year:  2013        PMID: 23703958      PMCID: PMC3745816          DOI: 10.1002/wsbm.1227

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN: 1939-005X


  53 in total

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Authors:  Simeone Marino; Ian B Hogue; Christian J Ray; Denise E Kirschner
Journal:  J Theor Biol       Date:  2008-04-20       Impact factor: 2.691

2.  Mathematical models of folate-mediated one-carbon metabolism.

Authors:  H F Nijhout; M C Reed; C M Ulrich
Journal:  Vitam Horm       Date:  2008       Impact factor: 3.421

3.  Shortening infusion time for high-dose methotrexate alters antileukemic effects: a randomized prospective clinical trial.

Authors:  Torben S Mikkelsen; Alex Sparreboom; Cheng Cheng; Yinmei Zhou; James M Boyett; Susana C Raimondi; John C Panetta; W Paul Bowman; John T Sandlund; Ching-Hon Pui; Mary V Relling; William E Evans
Journal:  J Clin Oncol       Date:  2011-03-28       Impact factor: 44.544

Review 4.  Tracer-based metabolomics: concepts and practices.

Authors:  W-N Paul Lee; Paulin N Wahjudi; Jun Xu; Vay Liang Go
Journal:  Clin Biochem       Date:  2010-08-14       Impact factor: 3.281

5.  Germline genetic variation in an organic anion transporter polypeptide associated with methotrexate pharmacokinetics and clinical effects.

Authors:  Lisa R Treviño; Noriko Shimasaki; Wenjian Yang; John C Panetta; Cheng Cheng; Deqing Pei; Diana Chan; Alex Sparreboom; Kathleen M Giacomini; Ching-Hon Pui; William E Evans; Mary V Relling
Journal:  J Clin Oncol       Date:  2009-11-09       Impact factor: 44.544

6.  Modeling mechanisms of in vivo variability in methotrexate accumulation and folate pathway inhibition in acute lymphoblastic leukemia cells.

Authors:  John C Panetta; Alex Sparreboom; Ching-Hon Pui; Mary V Relling; William E Evans
Journal:  PLoS Comput Biol       Date:  2010-12-02       Impact factor: 4.475

7.  Mathematical modeling of folate metabolism: predicted effects of genetic polymorphisms on mechanisms and biomarkers relevant to carcinogenesis.

Authors:  Cornelia M Ulrich; Marian Neuhouser; Amy Y Liu; Alanna Boynton; Jesse F Gregory; Barry Shane; S Jill James; Michael C Reed; H Frederik Nijhout
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2008-07       Impact factor: 4.254

Review 8.  Prospects for clinical cancer metabolomics using stable isotope tracers.

Authors:  Andrew N Lane; Teresa W-M Fan; Richard M Higashi; Jinlian Tan; Michael Bousamra; Donald M Miller
Journal:  Exp Mol Pathol       Date:  2009-01-20       Impact factor: 3.362

Review 9.  Investigation of inter-individual variability of the one-carbon folate pathway: a bioinformatic and genetic review.

Authors:  D F Carr; G Whiteley; A Alfirevic; M Pirmohamed
Journal:  Pharmacogenomics J       Date:  2009-07-07       Impact factor: 3.550

10.  A mathematical model of glutathione metabolism.

Authors:  Michael C Reed; Rachel L Thomas; Jovana Pavisic; S Jill James; Cornelia M Ulrich; H Frederik Nijhout
Journal:  Theor Biol Med Model       Date:  2008-04-28       Impact factor: 2.432

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  2 in total

Review 1.  Computational oncology--mathematical modelling of drug regimens for precision medicine.

Authors:  Dominique Barbolosi; Joseph Ciccolini; Bruno Lacarelle; Fabrice Barlési; Nicolas André
Journal:  Nat Rev Clin Oncol       Date:  2015-11-24       Impact factor: 66.675

2.  Rat liver folate metabolism can provide an independent functioning of associated metabolic pathways.

Authors:  Aleksandr V Zaitsev; Michael V Martinov; Victor M Vitvitsky; Fazoil I Ataullakhanov
Journal:  Sci Rep       Date:  2019-05-21       Impact factor: 4.379

  2 in total

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