Literature DB >> 23703288

Cu(II)-porphyrin molecular dynamics as seen in a novel EPR/Stochastic Liouville equation study.

Pär Håkansson1, ThaoNguyen Nguyen, Prasanth B Nair, Ruth Edge, Eugen Stulz.   

Abstract

Copper porphyrin dissolved in CH2Cl2:toluene as fluid and frozen solution was studied as a function of temperature using X-band electron paramagnetic resonance (EPR). Quantitative interpretation was obtained using a recently developed Stochastic Liouville simulation method. For the first time we address the large spin system that translates into a 400,000 dimensional Liouville equation solved under slow-motion conditions. Using a simple three parameter microscopic model, the temperature dependence of porphyrin rotational correlation time is determined to be in the range 1-10 ns and a fast local motion is in the subpico-second regime with an amplitude increasing with temperature. The methodology provides an important tool for arriving at an accurate set of spin Hamiltonian parameters since determining a unique set of parameters from a frozen solution EPR experiment is often difficult. Thus, the proposed method discriminates between parameters proposed from frozen solution EPR experiments or quantum chemistry calculations. The methodology presented is expected to be valuable in obtaining a molecular dynamics picture of metal proteins using EPR as well as in the study of artificial photosynthetic systems.

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Year:  2013        PMID: 23703288     DOI: 10.1039/c3cp50788b

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  3 in total

1.  Trajectory-Based Simulation of EPR Spectra: Models of Rotational Motion for Spin Labels on Proteins.

Authors:  Peter D Martin; Bengt Svensson; David D Thomas; Stefan Stoll
Journal:  J Phys Chem B       Date:  2019-11-21       Impact factor: 2.991

2.  A concentrated array of copper porphyrin candidate qubits.

Authors:  Chung-Jui Yu; Matthew D Krzyaniak; Majed S Fataftah; Michael R Wasielewski; Danna E Freedman
Journal:  Chem Sci       Date:  2018-11-21       Impact factor: 9.825

3.  Copper-catalyzed aerobic oxidative coupling: From ketone and diamine to pyrazine.

Authors:  Kun Wu; Zhiliang Huang; Xiaotian Qi; Yingzi Li; Guanghui Zhang; Chao Liu; Hong Yi; Lingkui Meng; Emilio E Bunel; Jeffrey T Miller; Chih-Wen Pao; Jyh-Fu Lee; Yu Lan; Aiwen Lei
Journal:  Sci Adv       Date:  2015-10-09       Impact factor: 14.136

  3 in total

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