Literature DB >> 2370312

Rapid method for distinguishing clonal from polyclonal B cell populations in surgical biopsy specimens.

K P McCarthy1, J P Sloane, L M Wiedemann.   

Abstract

The polymerase chain reaction (PCR) was used to detect clonal rearrangements of the immunological heavy chain gene in frozen samples of human lymphoid tissue. DNA sequences in rearranged genes were amplified using oligomeric primers predicted from conserved sequences in the variable (VH) and joining (JH) regions. On polyacrylamide gel electrophoresis, polyclonal B cell proliferations showed a "smear", probably due to the variable lengths of the diversity (DH) region genes and the N regions separating the VH and DH and JH regions. In contrast, DNA from B cell lymphomas showed a clear single band in eight out of 10 cases. PCR undertaken on germ line DNA from non-lymphoid tumours showed no detectable bands or smears. The method can be completed within one day of biopsy, compared with several days in the case of conventional DNA blot analysis. Furthermore, it is cheaper, simpler, avoids the need for radioactive materials and requires very small amounts of DNA (about 1 micrograms).

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Year:  1990        PMID: 2370312      PMCID: PMC502459          DOI: 10.1136/jcp.43.5.429

Source DB:  PubMed          Journal:  J Clin Pathol        ISSN: 0021-9746            Impact factor:   3.411


  13 in total

1.  Mechanism of the t(14;18) chromosomal translocation: structural analysis of both derivative 14 and 18 reciprocal partners.

Authors:  A Bakhshi; J J Wright; W Graninger; M Seto; J Owens; J Cossman; J P Jensen; P Goldman; S J Korsmeyer
Journal:  Proc Natl Acad Sci U S A       Date:  1987-04       Impact factor: 11.205

2.  Molecular analysis of the t(14;18) chromosomal translocation in malignant lymphomas.

Authors:  L M Weiss; R A Warnke; J Sklar; M L Cleary
Journal:  N Engl J Med       Date:  1987-11-05       Impact factor: 91.245

3.  Diagnosis of sickle cell anemia and beta-thalassemia with enzymatically amplified DNA and nonradioactive allele-specific oligonucleotide probes.

Authors:  R K Saiki; C A Chang; C H Levenson; T C Warren; C D Boehm; H H Kazazian; H A Erlich
Journal:  N Engl J Med       Date:  1988-09-01       Impact factor: 91.245

4.  Structure of the human immunoglobulin mu locus: characterization of embryonic and rearranged J and D genes.

Authors:  J V Ravetch; U Siebenlist; S Korsmeyer; T Waldmann; P Leder
Journal:  Cell       Date:  1981-12       Impact factor: 41.582

5.  Detection of minimal residual cells carrying the t(14;18) by DNA sequence amplification.

Authors:  M S Lee; K S Chang; F Cabanillas; E J Freireich; J M Trujillo; S A Stass
Journal:  Science       Date:  1987-07-10       Impact factor: 47.728

Review 6.  The arrangement of immunoglobulin and T cell receptor genes in human lymphoproliferative disorders.

Authors:  T A Waldmann
Journal:  Adv Immunol       Date:  1987       Impact factor: 3.543

7.  DNA rearrangements in human follicular lymphoma can involve the 5' or the 3' region of the bcl-2 gene.

Authors:  Y Tsujimoto; M M Bashir; I Givol; J Cossman; E Jaffe; C M Croce
Journal:  Proc Natl Acad Sci U S A       Date:  1987-03       Impact factor: 11.205

8.  Analysis of RAS gene mutations in acute myeloid leukemia by polymerase chain reaction and oligonucleotide probes.

Authors:  C J Farr; R K Saiki; H A Erlich; F McCormick; C J Marshall
Journal:  Proc Natl Acad Sci U S A       Date:  1988-03       Impact factor: 11.205

9.  Rearrangement of immunoglobulin heavy chain genes in human T leukaemic cells shows preferential utilization of the D segment (DQ52) nearest to the J region.

Authors:  S Mizutani; A M Ford; L M Wiedemann; L C Chan; A J Furley; M F Greaves; H V Molgaard
Journal:  EMBO J       Date:  1986-12-20       Impact factor: 11.598

10.  Translocation t(14;18) in B cell lymphomas as a cause for defective immunoglobulin production.

Authors:  D de Jong; B M Voetdijk; G J Van Ommen; J C Kluin-Nelemans; G C Beverstock; P M Kluin
Journal:  J Exp Med       Date:  1989-03-01       Impact factor: 14.307

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  39 in total

1.  PCR analysis of the immunoglobulin heavy chain gene in polyclonal processes can yield pseudoclonal bands as an artifact of low B cell number.

Authors:  K S Elenitoba-Johnson; S D Bohling; R S Mitchell; M S Brown; R S Robetorye
Journal:  J Mol Diagn       Date:  2000-05       Impact factor: 5.568

2.  Reactive and neoplastic lymphocytes in human bone marrow: morphological, immunohistological, and molecular biological investigations on biopsy specimens.

Authors:  S M Kröber; H P Horny; A Greschniok; E Kaiserling
Journal:  J Clin Pathol       Date:  1999-07       Impact factor: 3.411

3.  Detection of clonally restricted immunoglobulin heavy chain gene rearrangements in normal and lesional skin: analysis of the B cell component of the skin-associated lymphoid tissue and implications for the molecular diagnosis of cutaneous B cell lymphomas.

Authors:  M Nihal; D Mikkola; G S Wood
Journal:  J Mol Diagn       Date:  2000-02       Impact factor: 5.568

4.  Molecular-genetic analysis of ocular adnexal benign lymphoid hyperplasias by a two-step polymerase-chain-reaction.

Authors:  Y Takano; M Okudaira
Journal:  J Cancer Res Clin Oncol       Date:  1992       Impact factor: 4.553

5.  Translating research into cancer molecular diagnostics and patents.

Authors:  M Ladanyi
Journal:  J Clin Pathol       Date:  2005-08       Impact factor: 3.411

6.  A rapid and reliable PCR method for detecting clonal T cell populations.

Authors:  C Lynas; D Howe; J A Copplestone; S A Johnson; M J Phillips
Journal:  Clin Mol Pathol       Date:  1995-04

7.  The study of minimal residual disease in acute lymphoblastic leukaemia.

Authors:  C J Knechtli; N J Goulden; K Langlands; M N Potter
Journal:  Clin Mol Pathol       Date:  1995-04

8.  Simplified procedures for applying the polymerase chain reaction to routinely fixed paraffin wax sections.

Authors:  P J Coates; A J d'Ardenne; G Khan; H O Kangro; G Slavin
Journal:  J Clin Pathol       Date:  1991-02       Impact factor: 3.411

Review 9.  Malleable immunoglobulin genes and hematopathology - the good, the bad, and the ugly: a paper from the 2007 William Beaumont hospital symposium on molecular pathology.

Authors:  Adam Bagg
Journal:  J Mol Diagn       Date:  2008-08-07       Impact factor: 5.568

10.  Increased sensitivity of B-cell clonality analysis in formalin-fixed and paraffin-embedded B-cell lymphoma samples using an enzyme blend with both 5'-->3' DNA polymerase and 3'-->5' exonuclease activity.

Authors:  Timea P Gurbity; Eniko Bagdi; Nicole A Groen; Leo M Budel; Mustaffa Abbou; Laszlo Krenacs; Winand N M Dinjens
Journal:  Virchows Arch       Date:  2003-08-21       Impact factor: 4.064

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