Literature DB >> 23703035

Phenotypes from ancient DNA: approaches, insights and prospects.

Gloria G Fortes1, Camilla F Speller, Michael Hofreiter, Turi E King.   

Abstract

The great majority of phenotypic characteristics are complex traits, complicating the identification of the genes underlying their expression. However, both methodological and theoretical progress in genome-wide association studies have resulted in a much better understanding of the underlying genetics of many phenotypic traits, including externally visible characteristics (EVCs) such as eye and hair color. Consequently, it has become possible to predict EVCs from human samples lacking phenotypic information. Predicting EVCs from genetic evidence is clearly appealing for forensic applications involving the personal identification of human remains. Now, a recent paper has reported the genetic determination of eye and hair color in samples up to 800 years old. The ability to predict EVCs from ancient human remains opens up promising perspectives for ancient DNA research, as this could allow studies to directly address archaeological and evolutionary questions related to the temporal and geographical origins of the genetic variants underlying phenotypes.
© 2013 WILEY Periodicals, Inc.

Entities:  

Keywords:  EVC; HIrisPlex; NGS; ancient DNA; genotypes; phenotypes

Mesh:

Substances:

Year:  2013        PMID: 23703035     DOI: 10.1002/bies.201300036

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  5 in total

1.  Impacts of low coverage depths and post-mortem DNA damage on variant calling: a simulation study.

Authors:  Matthew Parks; David Lambert
Journal:  BMC Genomics       Date:  2015-01-23       Impact factor: 3.969

2.  Identification of the remains of King Richard III.

Authors:  Turi E King; Gloria Gonzalez Fortes; Patricia Balaresque; Mark G Thomas; David Balding; Pierpaolo Maisano Delser; Rita Neumann; Walther Parson; Michael Knapp; Susan Walsh; Laure Tonasso; John Holt; Manfred Kayser; Jo Appleby; Peter Forster; David Ekserdjian; Michael Hofreiter; Kevin Schürer
Journal:  Nat Commun       Date:  2014-12-02       Impact factor: 14.919

3.  When data sharing gets close to 100%: what human paleogenetics can teach the open science movement.

Authors:  Paolo Anagnostou; Marco Capocasa; Nicola Milia; Emanuele Sanna; Cinzia Battaggia; Daniela Luzi; Giovanni Destro Bisol
Journal:  PLoS One       Date:  2015-03-23       Impact factor: 3.240

Review 4.  Novel Substrates as Sources of Ancient DNA: Prospects and Hurdles.

Authors:  Eleanor Joan Green; Camilla F Speller
Journal:  Genes (Basel)       Date:  2017-07-13       Impact factor: 4.096

5.  The York Gospels: a 1000-year biological palimpsest.

Authors:  Matthew D Teasdale; Sarah Fiddyment; Jiří Vnouček; Valeria Mattiangeli; Camilla Speller; Annelise Binois; Martin Carver; Catherine Dand; Timothy P Newfield; Christopher C Webb; Daniel G Bradley; Matthew J Collins
Journal:  R Soc Open Sci       Date:  2017-10-25       Impact factor: 2.963

  5 in total

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