Literature DB >> 23702639

Dynamic and rapid changes in viral quasispecies by UDPS in chronic hepatitis C patients receiving telaprevir-based therapy.

Pascale Trimoulet1, Patricia Pinson, Jennifer Papuchon, Juliette Foucher, Julien Vergniol, Faiza Chermak, Linda Wittkop, Nadège Castaing, Wassil Merrouche, Sandrine Reigadas, Mathieu Molimard, Michael Kann, Hervé Fleury, Victor de Lédinghen.   

Abstract

BACKGROUND: Telaprevir (TVR) is a protease inhibitor (PI) used in chronic hepatitis C treatment with pegylated interferon plus ribavirin. We analysed the prevalence and kinetic development of TVR resistance upon treatment.
METHODS: A total of 24 cirrhotic patients (genotype 1a, n=8; genotype 1b, n=16) previously non-responders to standard therapy were treated with TVR-based therapy. The distribution of TVR-resistant variants was assessed at every HCV-RNA-positive time point by 454 ultra-deep pyrosequencing (UDPS) during a mean follow-up period of 9.4 months.
RESULTS: A median of 6,837 reads/specimen was studied. Based on control UDPS, we considered mutations as real when present >0.4%. TVR-resistant variants were found at baseline in 8/24 patients (33.3%). Four of the 24 patients (16.7%), all genotype 1a, did not achieve HCV RNA<100 IU/ml between week (W)2 and W12 and stopped treatment. No statistical significant difference was observed in the prevalence of resistant mutants between responders and non-responders (25% [5/20] and 75% [3/4], respectively). The proportion of genotype 1a patients with R155K/T/Q at baseline was higher in non-responders than in responders (50% versus 0%). During treatment failure, significant enrichment in V36A/M and R155K/T/Q was observed but their frequency reverted back to baseline after TVR discontinuation.
CONCLUSIONS: TVR-resistant variants are widely present at baseline. The presence of TVR-resistant mutants at baseline, even in high abundance (>20%), did not always preclude TVR treatment success. The detection of R155K/T/Q at baseline may predict failure in genotype 1a patients. At failure, which occurred in genotype 1a patients, a significant enrichment in V36A/M and R155K/T/Q was observed.

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Year:  2013        PMID: 23702639     DOI: 10.3851/IMP2632

Source DB:  PubMed          Journal:  Antivir Ther        ISSN: 1359-6535


  7 in total

1.  Ultradeep pyrosequencing of NS3 to predict response to triple therapy with protease inhibitors in previously treated chronic hepatitis C patients.

Authors:  Sylvie Larrat; Om Kulkarni; Jean-Baptiste Claude; Réjane Beugnot; Michaël G B Blum; Katia Fusillier; Julien Lupo; Pauline Tremeaux; Agnès Plages; Alice Marlu; Hervé Duborjal; Anne Signori-Schmuck; Olivier Francois; Jean-Pierre Zarski; Patrice Morand; Vincent Leroy
Journal:  J Clin Microbiol       Date:  2014-11-19       Impact factor: 5.948

2.  Naturally Occurring Resistance-Associated Variants of Hepatitis C Virus Protease Inhibitors in Poor Responders to Pegylated Interferon-Ribavirin.

Authors:  Sylvie Larrat; Sophie Vallet; Sandra David-Tchouda; Alban Caporossi; Jennifer Margier; Christophe Ramière; Caroline Scholtes; Stéphanie Haïm-Boukobza; Anne-Marie Roque-Afonso; Bernard Besse; Elisabeth André-Garnier; Sofiane Mohamed; Philippe Halfon; Adeline Pivert; Hélène LeGuillou-Guillemette; Florence Abravanel; Matthieu Guivarch; Vincent Mackiewicz; Olivier Lada; Thomas Mourez; Jean-Christophe Plantier; Yazid Baazia; Sophie Alain; Sebastien Hantz; Vincent Thibault; Catherine Gaudy-Graffin; Dorine Bouvet; Audrey Mirand; Cécile Henquell; Joel Gozlan; Gisèle Lagathu; Charlotte Pronier; Aurélie Velay; Evelyne Schvoerer; Pascale Trimoulet; Hervé Fleury; Magali Bouvier-Alias; Etienne Brochot; Gilles Duverlie; Sarah Maylin; Stéphanie Gouriou; Jean-Michel Pawlotsky; Patrice Morand
Journal:  J Clin Microbiol       Date:  2015-04-29       Impact factor: 5.948

3.  Similar prevalence of low-abundance drug-resistant variants in treatment-naive patients with genotype 1a and 1b hepatitis C virus infections as determined by ultradeep pyrosequencing.

Authors:  Severine Margeridon-Thermet; Sophie Le Pogam; Lewyn Li; Tommy F Liu; Nancy Shulman; Robert W Shafer; Isabel Najera
Journal:  PLoS One       Date:  2014-08-20       Impact factor: 3.240

Review 4.  Advanced molecular surveillance of hepatitis C virus.

Authors:  Livia Maria Gonçalves Rossi; Alejandro Escobar-Gutierrez; Paula Rahal
Journal:  Viruses       Date:  2015-03-13       Impact factor: 5.048

5.  Naturally occurring dominant drug resistance mutations occur infrequently in the setting of recently acquired hepatitis C.

Authors:  Tanya L Applegate; Silvana Gaudieri; Anne Plauzolles; Abha Chopra; Jason Grebely; Michaela Lucas; Margaret Hellard; Fabio Luciani; Gregory J Dore; Gail V Matthews
Journal:  Antivir Ther       Date:  2014-08-08

Review 6.  Resistance of Hepatitis C Virus to Inhibitors: Complexity and Clinical Implications.

Authors:  Celia Perales; Josep Quer; Josep Gregori; Juan Ignacio Esteban; Esteban Domingo
Journal:  Viruses       Date:  2015-11-06       Impact factor: 5.048

7.  Evaluation of the dynamic pattern of viral evolution in patients with virological breakthrough during treatment with nucleoside/nucleotide analogs by ultra‑deep pyrosequencing.

Authors:  Shaolong Chen; Jing Wu; Erli Gu; Yaojie Shen; Feifei Wang; Wenhong Zhang
Journal:  Mol Med Rep       Date:  2015-11-19       Impact factor: 2.952

  7 in total

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