Literature DB >> 23700283

A conserved region in the 3' untranslated region of the human LIMK1 gene is critical for proper expression of LIMK1 at the post-transcriptional level.

Guang-Fei Deng1, Shu-Jing Liu, Xun-Sha Sun, Wei-Wen Sun, Qi-Hua Zhao, Wei-Ping Liao, Yong-Hong Yi, Yue-Sheng Long.   

Abstract

LIM kinase 1 (LIMK1), a cytosolic serine/threonine kinase, regulates actin filament dynamics and reorganization and is involved in neuronal development and brain function. Abnormal expression of LIMK1 is associated with several neurological disorders. In this study, we performed a conservation analysis using Vector NTI (8.0) software. The dualluciferase reporter assay and real-time quantitative RT-PCR were used to assess the protein and mRNA levels of the reporter gene, respectively. We found that a region ranging from nt +884 to +966 in the human LIMK1 3' untranslated region (UTR) was highly conserved in the mouse Limk1 3' UTR and formed a structure containing several loops and stems. Luciferase assay showed that the relative luciferase activity of the mutated construct with the conserved region deleted, pGL4-hLIMK1-3U-M, in SH-SY5Y and HEK-293 cells was only ~60% of that of the wild-type construct pGL4-hLIMK1-3U, indicating that the conserved region is critical for the reporter gene expression. Real-time quantitative RT-PCR analysis demonstrated that the relative Luc2 mRNA levels in SH-SY5Y and HEK293 cells transfected with pGL4-hLIMK1-3U-M decreased to ~50% of that in cells transfected with pGL4-hLIMK1-3U, suggesting an important role of the conserved region in maintaining Luc2 mRNA stability. Our study suggests that the conserved region in the LIMK1 3' UTR is involved in regulating LIMK1 expression at the post-transcriptional level, which may help reveal the mechanism underlying the regulation of LIMK1 expression in the central nervous system and explore the relationship between the 3'-UTR mutant and neurological disorders.

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Year:  2013        PMID: 23700283      PMCID: PMC5561848          DOI: 10.1007/s12264-013-1341-z

Source DB:  PubMed          Journal:  Neurosci Bull        ISSN: 1995-8218            Impact factor:   5.203


  26 in total

Review 1.  Regulation of mRNA stability in mammalian cells.

Authors:  J Guhaniyogi; G Brewer
Journal:  Gene       Date:  2001-03-07       Impact factor: 3.688

2.  Promoter analysis of mouse Scn3a gene and regulation of the promoter activity by GC box and CpG methylation.

Authors:  Guang-Fei Deng; Jia-Ming Qin; Xun-Sha Sun; Zu-Ying Kuang; Tao Su; Qi-Hua Zhao; Yi-Wu Shi; Xiao-Rong Liu; Mei-Juan Yu; Yong-Hong Yi; Wei-Ping Liao; Yue-Sheng Long
Journal:  J Mol Neurosci       Date:  2011-01-27       Impact factor: 3.444

3.  Williams syndrome.

Authors:  Annette Karmiloff-Smith
Journal:  Curr Biol       Date:  2007-12-18       Impact factor: 10.834

Review 4.  Messenger RNA regulation: to translate or to degrade.

Authors:  Ann-Bin Shyu; Miles F Wilkinson; Ambro van Hoof
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Review 5.  Role of 5'- and 3'-untranslated regions of mRNAs in human diseases.

Authors:  Sangeeta Chatterjee; Jayanta K Pal
Journal:  Biol Cell       Date:  2009-05       Impact factor: 4.458

Review 6.  Diversity of cytoplasmic functions for the 3' untranslated region of eukaryotic transcripts.

Authors:  C J Decker; R Parker
Journal:  Curr Opin Cell Biol       Date:  1995-06       Impact factor: 8.382

7.  Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals.

Authors:  Xiaohui Xie; Jun Lu; E J Kulbokas; Todd R Golub; Vamsi Mootha; Kerstin Lindblad-Toh; Eric S Lander; Manolis Kellis
Journal:  Nature       Date:  2005-02-27       Impact factor: 49.962

8.  In vivo enhancer analysis of human conserved non-coding sequences.

Authors:  Len A Pennacchio; Nadav Ahituv; Alan M Moses; Shyam Prabhakar; Marcelo A Nobrega; Malak Shoukry; Simon Minovitsky; Inna Dubchak; Amy Holt; Keith D Lewis; Ingrid Plajzer-Frick; Jennifer Akiyama; Sarah De Val; Veena Afzal; Brian L Black; Olivier Couronne; Michael B Eisen; Axel Visel; Edward M Rubin
Journal:  Nature       Date:  2006-11-05       Impact factor: 49.962

9.  LIM-kinase deleted in Williams syndrome.

Authors:  M Tassabehji; K Metcalfe; W D Fergusson; M J Carette; J K Dore; D Donnai; A P Read; C Pröschel; N J Gutowski; X Mao; D Sheer
Journal:  Nat Genet       Date:  1996-07       Impact factor: 38.330

10.  Translational regulation of prostaglandin endoperoxide H synthase-1 mRNA in megakaryocytic MEG-01 cells. Specific protein binding to a conserved 20-nucleotide CIS element in the 3'-untranslated region.

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Journal:  J Biol Chem       Date:  2002-09-16       Impact factor: 5.157

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