Literature DB >> 23700161

Activity-based imaging probes of the proteasome.

Kimberly Cornish Carmony1, Kyung Bo Kim.   

Abstract

Over the years, the proteasome has been extensively investigated due to its crucial roles in many important signaling pathways and its implications in diseases. Two proteasome inhibitors--bortezomib and carfilzomib--have received FDA approval for the treatment of multiple myeloma, thereby validating the proteasome as a chemotherapeutic target. As a result, further research efforts have been focused on dissecting the complex biology of the proteasome to gain the insight required for developing next-generation proteasome inhibitors. It is clear that chemical probes have made significant contributions to these efforts, mostly by functioning as inhibitors that selectively block the catalytic activity of proteasomes. Analogues of these inhibitors are now providing additional tools for visualization of catalytically active proteasome subunits, several of which allow real-time monitoring of proteasome activity in living cells as well as in in vivo settings. These imaging probes will provide powerful tools for assessing the efficacy of proteasome inhibitors in clinical settings. In this review, we will focus on the recent efforts towards developing imaging probes of proteasomes, including the latest developments in immunoproteasome-selective imaging probes.

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Year:  2013        PMID: 23700161      PMCID: PMC3758798          DOI: 10.1007/s12013-013-9626-4

Source DB:  PubMed          Journal:  Cell Biochem Biophys        ISSN: 1085-9195            Impact factor:   2.194


  60 in total

1.  Nature of pharmacophore influences active site specificity of proteasome inhibitors.

Authors:  Michael Screen; Matthew Britton; Sondra L Downey; Martijn Verdoes; Mathias J Voges; Annet E M Blom; Paul P Geurink; Martijn D P Risseeuw; Bogdan I Florea; Wouter A van der Linden; Alexandre A Pletnev; Herman S Overkleeft; Alexei F Kisselev
Journal:  J Biol Chem       Date:  2010-10-11       Impact factor: 5.157

2.  Immunoproteasomes: regulating the regulator.

Authors:  Jonathan W Yewdell
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-20       Impact factor: 11.205

3.  Proteasome activity imaging and profiling characterizes bacterial effector syringolin A.

Authors:  Izabella Kolodziejek; Johana C Misas-Villamil; Farnusch Kaschani; Jérôme Clerc; Christian Gu; Daniel Krahn; Sherry Niessen; Martijn Verdoes; Lianne I Willems; Hermen S Overkleeft; Markus Kaiser; Renier A L van der Hoorn
Journal:  Plant Physiol       Date:  2010-11-02       Impact factor: 8.340

4.  Specific covalent labeling of recombinant protein molecules inside live cells.

Authors:  B A Griffin; S R Adams; R Y Tsien
Journal:  Science       Date:  1998-07-10       Impact factor: 47.728

5.  Fluorescence-based proteasome activity profiling.

Authors:  Annemieke de Jong; Karianne G Schuurman; Boris Rodenko; Huib Ovaa; Celia R Berkers
Journal:  Methods Mol Biol       Date:  2012

6.  Specific cell-permeable inhibitor of proteasome trypsin-like sites selectively sensitizes myeloma cells to bortezomib and carfilzomib.

Authors:  Anne C Mirabella; Alexandre A Pletnev; Sondra L Downey; Bogdan I Florea; Tamer B Shabaneh; Matthew Britton; Martijn Verdoes; Dmitri V Filippov; Herman S Overkleeft; Alexei F Kisselev
Journal:  Chem Biol       Date:  2011-05-27

7.  A novel orally active proteasome inhibitor induces apoptosis in multiple myeloma cells with mechanisms distinct from Bortezomib.

Authors:  Dharminder Chauhan; Laurence Catley; Guilan Li; Klaus Podar; Teru Hideshima; Mugdha Velankar; Constantine Mitsiades; Nicolas Mitsiades; Hiroshi Yasui; Anthony Letai; Huib Ovaa; Celia Berkers; Benjamin Nicholson; Ta-Hsiang Chao; Saskia T C Neuteboom; Paul Richardson; Michael A Palladino; Kenneth C Anderson
Journal:  Cancer Cell       Date:  2005-11       Impact factor: 31.743

8.  Activity probe for in vivo profiling of the specificity of proteasome inhibitor bortezomib.

Authors:  Celia R Berkers; Martijn Verdoes; Eben Lichtman; Edda Fiebiger; Benedikt M Kessler; Kenneth C Anderson; Hidde L Ploegh; Huib Ovaa; Paul J Galardy
Journal:  Nat Methods       Date:  2005-04-21       Impact factor: 28.547

9.  Epoxomicin, a potent and selective proteasome inhibitor, exhibits in vivo antiinflammatory activity.

Authors:  L Meng; R Mohan; B H Kwok; M Elofsson; N Sin; C M Crews
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

10.  Substrate binding and sequence preference of the proteasome revealed by active-site-directed affinity probes.

Authors:  M Bogyo; S Shin; J S McMaster; H L Ploegh
Journal:  Chem Biol       Date:  1998-06
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  7 in total

1.  Androgen receptor polyglutamine expansion drives age-dependent quality control defects and muscle dysfunction.

Authors:  Samir R Nath; Zhigang Yu; Theresa A Gipson; Gregory B Marsh; Eriko Yoshidome; Diane M Robins; Sokol V Todi; David E Housman; Andrew P Lieberman
Journal:  J Clin Invest       Date:  2018-07-23       Impact factor: 14.808

2.  Elucidating the catalytic subunit composition of distinct proteasome subtypes: a crosslinking approach employing bifunctional activity-based probes.

Authors:  Kimberly Cornish Carmony; Lalit Kumar Sharma; Do-Min Lee; Ji Eun Park; Wooin Lee; Kyung-Bo Kim
Journal:  Chembiochem       Date:  2014-12-04       Impact factor: 3.164

3.  A FRET-based approach for identification of proteasome catalytic subunit composition.

Authors:  Ji Eun Park; Ying Wu; Kimberly Cornish Carmony; Zachary Miller; Lalit Kumar Sharma; Do-Min Lee; Doo-Young Kim; Wooin Lee; Kyung-Bo Kim
Journal:  Mol Biosyst       Date:  2014-02

Review 4.  Methods for the discovery of small molecules to monitor and perturb the activity of the human proteasome.

Authors:  Marianne E Maresh; Andres F Salazar-Chaparro; Darci J Trader
Journal:  Future Med Chem       Date:  2020-12-04       Impact factor: 3.808

5.  Multicolor monitoring of the proteasome's catalytic signature.

Authors:  Melanie A Priestman; Qunzhao Wang; Finith E Jernigan; Ruma Chowdhury; Marion Schmidt; David S Lawrence
Journal:  ACS Chem Biol       Date:  2014-11-07       Impact factor: 5.100

6.  Proteasomal activity-based probes mark protein homeostasis in muscles.

Authors:  Vered Raz; Yotam Raz; Guillem Paniagua-Soriano; Jacomina Cornelia Roorda; Cyriel Olie; Muhammad Riaz; Bogdan I Florea
Journal:  J Cachexia Sarcopenia Muscle       Date:  2017-07-03       Impact factor: 12.910

7.  Monitoring Target Engagement of Deubiquitylating Enzymes Using Activity Probes: Past, Present, and Future.

Authors:  Jeanine Harrigan; Xavier Jacq
Journal:  Methods Mol Biol       Date:  2016
  7 in total

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