Literature DB >> 23695570

Crystallization and preliminary X-ray diffraction analysis of the TetR-family transcriptional repressor YhgD from Bacillus halodurans.

Hyun Ku Yeo1, Young Woo Park, Jina Kang, Jae Young Lee.   

Abstract

YhgD is a member of the TetR-family transcription factors, which regulate genes encoding proteins involved in multidrug resistance, virulence, osmotic stress and pathogenicity. YhgD from the alkaliphilic bacterium Bacillus halodurans was cloned and overexpressed in Escherichia coli. YhgD (Bh2145) from B. halodurans is composed of 193 amino-acid residues with a molecular mass of 21 853 Da. YhgD was crystallized at 296 K using ethylene glycol as a precipitant by the sitting-drop vapour-diffusion method. The crystal diffracted to 1.9 Å resolution and belonged to the apparent triclinic space group P1, with unit-cell parameters a = 37.22, b = 47.85, c = 54.15 Å, α = 92.75, β = 107.9, γ = 90.27°. The asymmetric unit is likely to contain two molecules of monomeric YhgD, giving a crystal volume per mass (VM) of 2.05 Å(3) Da(-1) and a solvent content of 40.2%.

Entities:  

Keywords:  TetR family; YhgD; transcriptional regulators

Mesh:

Substances:

Year:  2013        PMID: 23695570      PMCID: PMC3660894          DOI: 10.1107/S174430911300763X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  19 in total

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3.  Likelihood-enhanced fast rotation functions.

Authors:  Laurent C Storoni; Airlie J McCoy; Randy J Read
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Authors:  Juan L Ramos; Manuel Martínez-Bueno; Antonio J Molina-Henares; Wilson Terán; Kazuya Watanabe; Xiaodong Zhang; María Trinidad Gallegos; Richard Brennan; Raquel Tobes
Journal:  Microbiol Mol Biol Rev       Date:  2005-06       Impact factor: 11.056

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  Structure of the Tet repressor-tetracycline complex and regulation of antibiotic resistance.

Authors:  W Hinrichs; C Kisker; M Düvel; A Müller; K Tovar; W Hillen; W Saenger
Journal:  Science       Date:  1994-04-15       Impact factor: 47.728

7.  Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis.

Authors:  H Takami; K Nakasone; Y Takaki; G Maeno; R Sasaki; N Masui; F Fuji; C Hirama; Y Nakamura; N Ogasawara; S Kuhara; K Horikoshi
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

8.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

Authors:  T Geoff G Battye; Luke Kontogiannis; Owen Johnson; Harold R Powell; Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

9.  Crystal structure of the TetR/CamR family repressor Mycobacterium tuberculosis EthR implicated in ethionamide resistance.

Authors:  Lynn G Dover; Patrick E Corsino; Ian R Daniels; Sarah L Cocklin; Vijaya Tatituri; Gurdyal S Besra; Klaus Fütterer
Journal:  J Mol Biol       Date:  2004-07-23       Impact factor: 5.469

10.  A graphical user interface to the CCP4 program suite.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-06-27
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