Literature DB >> 23692597

Segmentation of clustered nuclei based on concave curve expansion.

C Zhang1, C Sun, T D Pham.   

Abstract

Segmentation of nuclei from images of tissue sections is important for many biological and biomedical studies. Many existing image segmentation algorithms may lead to oversegmentation or undersegmentation for clustered nuclei images. In this paper, we proposed a new image segmentation algorithm based on concave curve expansion to correctly and accurately extract markers from the original images. Marker-controlled watershed is then used to segment the clustered nuclei. The algorithm was tested on both synthetic and real images and better results are achieved compared with some other state-of-the-art methods.
© 2013 The Authors Journal of Microscopy © 2013 Royal Microscopical Society.

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Year:  2013        PMID: 23692597     DOI: 10.1111/jmi.12043

Source DB:  PubMed          Journal:  J Microsc        ISSN: 0022-2720            Impact factor:   1.758


  6 in total

1.  Clumped Nuclei Segmentation with Adjacent Point Match and Local Shape-Based Intensity Analysis in Fluorescence Microscopy Images.

Authors:  Xiaoyuan Guo; Hanyi Yu; Blair Rossetti; George Teodoro; Daniel Brat; Jun Kong
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2018-07

2.  Automated Individualization of Size-Varying and Touching Neurons in Macaque Cerebral Microscopic Images.

Authors:  Zhenzhen You; Yaël Balbastre; Clément Bouvier; Anne-Sophie Hérard; Pauline Gipchtein; Philippe Hantraye; Caroline Jan; Nicolas Souedet; Thierry Delzescaux
Journal:  Front Neuroanat       Date:  2019-12-17       Impact factor: 3.856

3.  Analyzing Cell-Scaffold Interaction through Unsupervised 3D Nuclei Segmentation.

Authors:  Kai Yao; Jie Sun; Kaizhu Huang; Linzhi Jing; Hang Liu; Dejian Huang; Curran Jude
Journal:  Int J Bioprint       Date:  2021-12-30

Review 4.  Evaluating Cancer-Related Biomarkers Based on Pathological Images: A Systematic Review.

Authors:  Xiaoliang Xie; Xulin Wang; Yuebin Liang; Jingya Yang; Yan Wu; Li Li; Xin Sun; Pingping Bing; Binsheng He; Geng Tian; Xiaoli Shi
Journal:  Front Oncol       Date:  2021-11-10       Impact factor: 6.244

5.  Digital reconstruction of the cell body in dense neural circuits using a spherical-coordinated variational model.

Authors:  Tingwei Quan; Jing Li; Hang Zhou; Shiwei Li; Ting Zheng; Zhongqing Yang; Qingming Luo; Hui Gong; Shaoqun Zeng
Journal:  Sci Rep       Date:  2014-05-15       Impact factor: 4.379

6.  Limits of Applicability of the Voronoi Tessellation Determined by Centers of Cell Nuclei to Epithelium Morphology.

Authors:  Sara Kaliman; Christina Jayachandran; Florian Rehfeldt; Ana-Sunčana Smith
Journal:  Front Physiol       Date:  2016-11-25       Impact factor: 4.566

  6 in total

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