Literature DB >> 23689373

Comparison of predicted epimerases and reductases of the Campylobacter jejuni D-altro- and L-gluco-heptose synthesis pathways.

Matthew McCallum1, Gary S Shaw, Carole Creuzenet.   

Abstract

Uniquely modified heptoses found in surface carbohydrates of bacterial pathogens are potential therapeutic targets against such pathogens. Our recent biochemical characterization of the GDP-6-deoxy-D-manno- and GDP-6-deoxy-D-altro-heptose biosynthesis pathways has provided the foundation for elucidation of the more complex L-gluco-heptose synthesis pathway of Campylobacter jejuni strain NCTC 11168. In this work we use GDP-4-keto,6-deoxy-D-lyxo-heptose as a surrogate substrate to characterize three enzymes predicted to be involved in this pathway: WcaGNCTC (also known as Cj1427), MlghB (Cj1430), and MlghC (Cj1428). We compare them with homologues involved in d-altro-heptose production: WcaG81176 (formerly WcaG), DdahB (Cjj1430), and DdahC (Cjj1427). We show that despite high levels of similarity, the enzymes have pathway-specific catalytic activities and substrate specificities. MlghB forms three products via C3 and C5 epimerization activities, whereas its DdahB homologue only had C3 epimerase activity along its cognate pathway. MlghC is specific for the double C3/C5 epimer generated by MlghB and produces L-gluco-heptose via stereospecific C4 reductase activity. In contrast, its homologue DdahC only uses the C3 epimer to yield d-altro-heptose via C4 reduction. Finally, we show that WcaGNCTC is not necessary for L-gluco-heptose synthesis and does not affect its production by MlghB and MlghC, in contrast to its homologue WcaG81176, that has regulatory activity on d-altro-heptose synthesis. These studies expand our fundamental understanding of heptose modification, provide new glycobiology tools to synthesize novel heptose derivatives with biomedical applications, and provide a foundation for the structure function analysis of these enzymes.

Entities:  

Keywords:  Bacterial Pathogenesis; Campylobacter; Capsule; Carbohydrate Biosynthesis; Enzyme Catalysis; Epimerases; Glycobiology; Heptose Modification

Mesh:

Substances:

Year:  2013        PMID: 23689373      PMCID: PMC3707658          DOI: 10.1074/jbc.M113.468066

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  38 in total

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Authors:  Louise L Major; Beata A Wolucka; James H Naismith
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2.  Conversion of dTDP-4-keto-6-deoxyglucose to free dTDP-4-keto-rhamnose by the rmIC gene products of Escherichia coli and Mycobacterium tuberculosis.

Authors:  Richard J Stern; Tae-Yoon Lee; Tae-Jin Lee; Wenxin Yan; Michael S Scherman; Varalakshmi D Vissa; Soo-Ki Kim; Barry L Wanner; Michael R McNeil
Journal:  Microbiology       Date:  1999-03       Impact factor: 2.777

3.  Mapping the active site of the Haemophilus influenzae methionyl-tRNA formyltransferase: residues important for catalysis and tRNA binding.

Authors:  D T Newton; D Mangroo
Journal:  Biochem J       Date:  1999-04-01       Impact factor: 3.857

Review 4.  Bacterial polysaccharide synthesis and gene nomenclature.

Authors:  P R Reeves; M Hobbs; M A Valvano; M Skurnik; C Whitfield; D Coplin; N Kido; J Klena; D Maskell; C R Raetz; P D Rick
Journal:  Trends Microbiol       Date:  1996-12       Impact factor: 17.079

5.  Stereochemical course and steady state mechanism of the reaction catalyzed by the GDP-fucose synthetase from Escherichia coli.

Authors:  S Menon; M Stahl; R Kumar; G Y Xu; F Sullivan
Journal:  J Biol Chem       Date:  1999-09-17       Impact factor: 5.157

6.  Variation of the rfb gene clusters in Salmonella enterica.

Authors:  S H Xiang; A M Haase; P R Reeves
Journal:  J Bacteriol       Date:  1993-08       Impact factor: 3.490

7.  Genetic analysis of the O-specific lipopolysaccharide biosynthesis region (rfb) of Escherichia coli K-12 W3110: identification of genes that confer group 6 specificity to Shigella flexneri serotypes Y and 4a.

Authors:  Z Yao; M A Valvano
Journal:  J Bacteriol       Date:  1994-07       Impact factor: 3.490

8.  GDP-4-keto-6-deoxy-D-mannose epimerase/reductase from Escherichia coli, a key enzyme in the biosynthesis of GDP-L-fucose, displays the structural characteristics of the RED protein homology superfamily.

Authors:  M Rizzi; M Tonetti; P Vigevani; L Sturla; A Bisso; A D Flora; D Bordo; M Bolognesi
Journal:  Structure       Date:  1998-11-15       Impact factor: 5.006

9.  Analysis of Campylobacter jejuni capsular loci reveals multiple mechanisms for the generation of structural diversity and the ability to form complex heptoses.

Authors:  Andrey V Karlyshev; Olivia L Champion; Carol Churcher; Jean-Robert Brisson; Harold C Jarrell; Michel Gilbert; Denis Brochu; Frank St Michael; Jianjun Li; Warren W Wakarchuk; Ian Goodhead; Mandy Sanders; Kim Stevens; Brian White; Julian Parkhill; Brendan W Wren; Christine M Szymanski
Journal:  Mol Microbiol       Date:  2005-01       Impact factor: 3.501

10.  RmlC, a C3' and C5' carbohydrate epimerase, appears to operate via an intermediate with an unusual twist boat conformation.

Authors:  Changjiang Dong; Louise L Major; Velupillai Srikannathasan; James C Errey; Marie-France Giraud; Joseph S Lam; Michael Graninger; Paul Messner; Michael R McNeil; Robert A Field; Chris Whitfield; James H Naismith
Journal:  J Mol Biol       Date:  2006-09-29       Impact factor: 5.469

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Authors:  Jamison P Huddleston; Frank M Raushel
Journal:  Biochemistry       Date:  2019-08-29       Impact factor: 3.162

2.  Functional Characterization of Cj1427, a Unique Ping-Pong Dehydrogenase Responsible for the Oxidation of GDP-d-glycero-α-d-manno-heptose in Campylobacter jejuni.

Authors:  Jamison P Huddleston; Frank M Raushel
Journal:  Biochemistry       Date:  2020-03-18       Impact factor: 3.162

3.  Structural Analysis of Cj1427, an Essential NAD-Dependent Dehydrogenase for the Biosynthesis of the Heptose Residues in the Capsular Polysaccharides of Campylobacter jejuni.

Authors:  Jamison P Huddleston; Thomas K Anderson; Keelan D Spencer; James B Thoden; Frank M Raushel; Hazel M Holden
Journal:  Biochemistry       Date:  2020-03-23       Impact factor: 3.162

Review 4.  Discovery of novel pathways for carbohydrate metabolism.

Authors:  Tyler M M Stack; John A Gerlt
Journal:  Curr Opin Chem Biol       Date:  2020-11-13       Impact factor: 8.822

5.  Functional and Structural Characterization of the UDP-Glucose Dehydrogenase Involved in Capsular Polysaccharide Biosynthesis from Campylobacter jejuni.

Authors:  Alexander S Riegert; Frank M Raushel
Journal:  Biochemistry       Date:  2021-02-23       Impact factor: 3.162

6.  Biosynthesis of d-glycero-l-gluco-Heptose in the Capsular Polysaccharides of Campylobacter jejuni.

Authors:  Jamison P Huddleston; Thomas K Anderson; Nicholas M Girardi; James B Thoden; Zane Taylor; Hazel M Holden; Frank M Raushel
Journal:  Biochemistry       Date:  2021-04-26       Impact factor: 3.162

7.  Functional Characterization of Two PLP-Dependent Enzymes Involved in Capsular Polysaccharide Biosynthesis from Campylobacter jejuni.

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8.  A conservative distribution of tridomain NDP-heptose synthetases in actinobacteria.

Authors:  Yue Tang; Wei Tang; Min Wang; Zhilong Zhang; Yihua Chen
Journal:  Sci China Life Sci       Date:  2021-10-08       Impact factor: 10.372

  8 in total

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