Literature DB >> 23684949

Mathematical analysis of multiscale models for hepatitis C virus dynamics under therapy with direct-acting antiviral agents.

Libin Rong1, Alan S Perelson.   

Abstract

Chronic hepatitis C virus (HCV) infection remains a world-wide public health problem. Therapy with interferon and ribavirin leads to viral elimination in less than 50% of treated patients. New treatment options aiming at a higher cure rate are focused on direct-acting antiviral agents (DAAs), which directly interfere with different steps in the HCV life cycle. In this paper, we describe and analyze a recently developed multiscale model that predicts HCV dynamics under therapy with DAAs. The model includes both intracellular viral RNA replication and extracellular viral infection. We calculate the steady states of the model and perform a detailed stability analysis. With certain assumptions we obtain analytical approximations of the viral load decline after treatment initiation. One approximation agrees well with the prediction of the model, and can conveniently be used to fit patient data and estimate parameter values. We also discuss other possible ways to incorporate intracellular viral dynamics into the multiscale model.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Age-structured model; Antiviral therapy; Hepatitis C virus; Intracellular viral RNA; Multiscale model; Stability; Viral kinetics

Mesh:

Substances:

Year:  2013        PMID: 23684949      PMCID: PMC3759661          DOI: 10.1016/j.mbs.2013.04.012

Source DB:  PubMed          Journal:  Math Biosci        ISSN: 0025-5564            Impact factor:   2.144


  38 in total

1.  Rapid emergence of protease inhibitor resistance in hepatitis C virus.

Authors:  Libin Rong; Harel Dahari; Ruy M Ribeiro; Alan S Perelson
Journal:  Sci Transl Med       Date:  2010-05-05       Impact factor: 17.956

2.  An age-structured model of hiv infection that allows for variations in the production rate of viral particles and the death rate of productively infected cells.

Authors:  Patrick W Nelson; Michael A Gilchrist; Daniel Coombs; James M Hyman; Alan S Perelson
Journal:  Math Biosci Eng       Date:  2004-09       Impact factor: 2.080

3.  Hepatitis C Viral Kinetics in the Era of Direct Acting Antiviral Agents and IL28B.

Authors:  Harel Dahari; Jeremie Guedj; Alan S Perelson; Thomas J Layden
Journal:  Curr Hepat Rep       Date:  2011-07-02

Review 4.  Treatment of hepatitis C virus infection with interferon and small molecule direct antivirals: viral kinetics and modeling.

Authors:  Libin Rong; Alan S Perelson
Journal:  Crit Rev Immunol       Date:  2010       Impact factor: 2.214

5.  Understanding hepatitis C viral dynamics with direct-acting antiviral agents due to the interplay between intracellular replication and cellular infection dynamics.

Authors:  J Guedj; A U Neumann
Journal:  J Theor Biol       Date:  2010-09-08       Impact factor: 2.691

6.  Modelling how ribavirin improves interferon response rates in hepatitis C virus infection.

Authors:  Narendra M Dixit; Jennifer E Layden-Almer; Thomas J Layden; Alan S Perelson
Journal:  Nature       Date:  2004-12-16       Impact factor: 49.962

7.  Viral dynamics and response differences in HCV-infected African American and white patients treated with IFN and ribavirin.

Authors:  Jennifer E Layden-Almer; Ruy M Ribeiro; Thelma Wiley; Alan S Perelson; Thomas J Layden
Journal:  Hepatology       Date:  2003-06       Impact factor: 17.425

8.  Antiviral action of ribavirin in chronic hepatitis C.

Authors:  Jean-Michel Pawlotsky; Harel Dahari; Avidan U Neumann; Christophe Hezode; Georgios Germanidis; Isabelle Lonjon; Laurent Castera; Daniel Dhumeaux
Journal:  Gastroenterology       Date:  2004-03       Impact factor: 22.682

9.  A viral dynamic model for treatment regimens with direct-acting antivirals for chronic hepatitis C infection.

Authors:  Bambang S Adiwijaya; Tara L Kieffer; Joshua Henshaw; Karen Eisenhauer; Holly Kimko; John J Alam; Robert S Kauffman; Varun Garg
Journal:  PLoS Comput Biol       Date:  2012-01-05       Impact factor: 4.475

10.  Analysis of hepatitis C virus decline during treatment with the protease inhibitor danoprevir using a multiscale model.

Authors:  Libin Rong; Jeremie Guedj; Harel Dahari; Daniel J Coffield; Micha Levi; Patrick Smith; Alan S Perelson
Journal:  PLoS Comput Biol       Date:  2013-03-14       Impact factor: 4.475

View more
  14 in total

Review 1.  A New Model for the Dynamics of Hepatitis C Infection: Derivation, Analysis and Implications.

Authors:  Philip J Aston
Journal:  Viruses       Date:  2018-04-13       Impact factor: 5.048

Review 2.  Modelling hepatitis C therapy--predicting effects of treatment.

Authors:  Alan S Perelson; Jeremie Guedj
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2015-06-30       Impact factor: 46.802

3.  Advances in Parameter Estimation and Learning from Data for Mathematical Models of Hepatitis C Viral Kinetics.

Authors:  Vladimir Reinharz; Alexander Churkin; Harel Dahari; Danny Barash
Journal:  Mathematics (Basel)       Date:  2022-06-19

4.  Numerical schemes for solving and optimizing multiscale models with age of hepatitis C virus dynamics.

Authors:  Vladimir Reinharz; Harel Dahari; Danny Barash
Journal:  Math Biosci       Date:  2018-03-15       Impact factor: 2.144

Review 5.  Viral kinetic modeling: state of the art.

Authors:  Laetitia Canini; Alan S Perelson
Journal:  J Pharmacokinet Pharmacodyn       Date:  2014-06-25       Impact factor: 2.745

Review 6.  Ribavirin: Past, present and future.

Authors:  Véronique Loustaud-Ratti; Marilyne Debette-Gratien; Jérémie Jacques; Sophie Alain; Pierre Marquet; Denis Sautereau; Annick Rousseau; Paul Carrier
Journal:  World J Hepatol       Date:  2016-01-18

7.  Disentangling the lifespans of hepatitis C virus-infected cells and intracellular vRNA replication-complexes during direct-acting anti-viral therapy.

Authors:  Erwing Fabian Cardozo; Dong Ji; George Lau; Raymond F Schinazi; Guo-Feng Chen; Ruy M Ribeiro; Alan S Perelson
Journal:  J Viral Hepat       Date:  2019-11-22       Impact factor: 3.728

8.  Mathematical modeling of multi-drugs therapy: a challenge for determining the optimal combinations of antiviral drugs.

Authors:  Yoshiki Koizumi; Shingo Iwami
Journal:  Theor Biol Med Model       Date:  2014-09-25       Impact factor: 2.432

9.  Viral genome imaging of hepatitis C virus to probe heterogeneous viral infection and responses to antiviral therapies.

Authors:  Vyas Ramanan; Kartik Trehan; Mei-Lyn Ong; Joseph M Luna; Hans-Heinrich Hoffmann; Christine Espiritu; Timothy P Sheahan; Hamsika Chandrasekar; Robert E Schwartz; Kathleen S Christine; Charles M Rice; Alexander van Oudenaarden; Sangeeta N Bhatia
Journal:  Virology       Date:  2016-04-27       Impact factor: 3.616

10.  The paradox of highly effective sofosbuvir-based combination therapy despite slow viral decline: can we still rely on viral kinetics?

Authors:  Thi Huyen Tram Nguyen; Jérémie Guedj; Susan L Uprichard; Anita Kohli; Shyam Kottilil; Alan S Perelson
Journal:  Sci Rep       Date:  2017-08-31       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.