Literature DB >> 23684842

Gene dosage effects: nonlinearities, genetic interactions, and dosage compensation.

Reiner A Veitia1, Samuel Bottani, James A Birchler.   

Abstract

High-throughput genomic analyses have shown that many mutations, including loss-of-function (LOF) mutations, are present in diseased as well as in healthy individuals. Gene dosage effects due to deletions, duplications, and LOF mutations provide avenues to explore oligo- and multigenic inheritance. Here, we focus on several mechanisms that mediate gene dosage effects and analyze biochemical interactions among multiple gene products that are sources of nonlinear relations connecting genotypes and phenotypes. We also explore potential mechanisms that compensate for gene dosage effects. Understanding these issues is critical to understanding why an individual bearing a few damaging mutations can be severely diseased, whereas others harboring tens of potentially deleterious mutations can appear quite healthy.
Copyright © 2013 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2013        PMID: 23684842     DOI: 10.1016/j.tig.2013.04.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  48 in total

1.  Repeated Whole-Genome Duplication, Karyotype Reshuffling, and Biased Retention of Stress-Responding Genes in Buckler Mustard.

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2.  Differential effect of aneuploidy on the X chromosome and genes with sex-biased expression in Drosophila.

Authors:  Lin Sun; Adam F Johnson; Jilong Li; Aaron S Lambdin; Jianlin Cheng; James A Birchler
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-23       Impact factor: 11.205

3.  A New Mechanism for Mendelian Dominance in Regulatory Genetic Pathways: Competitive Binding by Transcription Factors.

Authors:  Adam H Porter; Norman A Johnson; Alexander Y Tulchinsky
Journal:  Genetics       Date:  2016-11-18       Impact factor: 4.562

4.  Nonlinear gene expression-phenotype relationships contribute to variation and clefting in the A/WySn mouse.

Authors:  Rebecca M Green; Courtney L Leach; Virginia M Diewert; Jose David Aponte; Eric J Schmidt; James M Cheverud; Charles C Roseman; Nathan M Young; Ralph S Marcucio; Benedikt Hallgrimsson
Journal:  Dev Dyn       Date:  2019-09-14       Impact factor: 3.780

Review 5.  Facts and artifacts in studies of gene expression in aneuploids and sex chromosomes.

Authors:  James A Birchler
Journal:  Chromosoma       Date:  2014-07-29       Impact factor: 4.316

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Authors:  Jan-Marino Ramirez; Marlusa Karlen-Amarante; Jia-Der Ju Wang; Nicholas E Bush; Michael S Carroll; Debra E Weese-Mayer; Alyssa Huff
Journal:  Physiology (Bethesda)       Date:  2020-11-01

Review 7.  Genetic dissection of the auxin response network.

Authors:  Alon Israeli; Jason W Reed; Naomi Ori
Journal:  Nat Plants       Date:  2020-08-17       Impact factor: 15.793

8.  Global Analysis of Gene Expression in Response to Whole-Chromosome Aneuploidy in Hexaploid Wheat.

Authors:  Ai Zhang; Ning Li; Lei Gong; Xiaowan Gou; Bin Wang; Xin Deng; Changping Li; Qianli Dong; Huakun Zhang; Bao Liu
Journal:  Plant Physiol       Date:  2017-08-18       Impact factor: 8.340

Review 9.  Stem and progenitor cell dysfunction in human trisomies.

Authors:  Binbin Liu; Sarah Filippi; Anindita Roy; Irene Roberts
Journal:  EMBO Rep       Date:  2014-12-17       Impact factor: 8.807

10.  A System for Dosage-Based Functional Genomics in Poplar.

Authors:  Isabelle M Henry; Matthew S Zinkgraf; Andrew T Groover; Luca Comai
Journal:  Plant Cell       Date:  2015-08-28       Impact factor: 11.277

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